RNA–Protein interactions for RNA: ENST00000508660.5

ATP2C1-215, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 5

Gene ATP2C1, Length 943 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-215ENST00000508660 ZBTB12Q9Y330 459 aaPredicted RBP13.89□□□□□ -0.19
ATP2C1-215ENST00000508660 CHD1O14646 1710 aa13.88□□□□□ -0.19
ATP2C1-215ENST00000508660 IFT140Q96RY7 1462 aa13.87□□□□□ -0.19
ATP2C1-215ENST00000508660 EHMT2Q96KQ7 1210 aa13.85□□□□□ -0.19
ATP2C1-215ENST00000508660 FBLN2P98095 1184 aa13.82□□□□□ -0.2
ATP2C1-215ENST00000508660 EIF4G3O43432 1585 aaKnown RBP13.82□□□□□ -0.2
ATP2C1-215ENST00000508660 POTEHQ6S545 545 aa13.79□□□□□ -0.2
ATP2C1-215ENST00000508660 AQRO60306 1485 aaKnown RBP eCLIP13.78□□□□□ -0.23e-7■■■■■ 38.5
ATP2C1-215ENST00000508660 WIZO95785 1651 aa13.78□□□□□ -0.2
ATP2C1-215ENST00000508660 MKRN4PQ13434 485 aaPredicted RBP13.74□□□□□ -0.21
ATP2C1-215ENST00000508660 KDM4FA0A1W2PPD8 638 aa13.73□□□□□ -0.21
ATP2C1-215ENST00000508660 CLASP1Q7Z460 1538 aa13.72□□□□□ -0.21
ATP2C1-215ENST00000508660 TOPBP1Q92547 1522 aa13.71□□□□□ -0.21
ATP2C1-215ENST00000508660 AKT1S1Q96B36 256 aa13.7□□□□□ -0.22
ATP2C1-215ENST00000508660 TARBP1Q13395 1621 aaKnown RBP13.66□□□□□ -0.22
ATP2C1-215ENST00000508660 GAPVD1Q14C86 1478 aa13.64□□□□□ -0.23
ATP2C1-215ENST00000508660 CHRDL2Q6WN34 429 aa13.62□□□□□ -0.23
ATP2C1-215ENST00000508660 REM2Q8IYK8 340 aaPredicted RBP13.61□□□□□ -0.23
ATP2C1-215ENST00000508660 PRDM2Q13029 1718 aa13.6□□□□□ -0.23
ATP2C1-215ENST00000508660 KIF13AQ9H1H9 1805 aa13.57□□□□□ -0.24
ATP2C1-215ENST00000508660 CHMP7Q8WUX9 453 aaPredicted RBP13.57□□□□□ -0.24
ATP2C1-215ENST00000508660 SYNJ1O43426 1573 aa13.57□□□□□ -0.24
ATP2C1-215ENST00000508660 TDRD9Q8NDG6 1382 aaKnown RBP13.57□□□□□ -0.24
ATP2C1-215ENST00000508660 SNAPC4Q5SXM2 1469 aa13.56□□□□□ -0.24
ATP2C1-215ENST00000508660 ABCC8Q09428 1581 aa13.55□□□□□ -0.24
ATP2C1-215ENST00000508660 DNMBPQ6XZF7 1577 aa13.55□□□□□ -0.24
ATP2C1-215ENST00000508660 SPDYE2BA6NHP3 402 aa13.54□□□□□ -0.24
ATP2C1-215ENST00000508660 SPDYE6P0CI01 402 aa13.54□□□□□ -0.24
ATP2C1-215ENST00000508660 SPDYE2Q495Y8 402 aa13.54□□□□□ -0.24
ATP2C1-215ENST00000508660 RAD54L2Q9Y4B4 1467 aa13.53□□□□□ -0.24
ATP2C1-215ENST00000508660 POLA1P09884 1462 aaPredicted RBP13.52□□□□□ -0.25
ATP2C1-215ENST00000508660 ERCC6L2Q5T890 1561 aa13.51□□□□□ -0.25
ATP2C1-215ENST00000508660 TOP2AP11388 1531 aaKnown RBP13.49□□□□□ -0.25
ATP2C1-215ENST00000508660 PITPNM1O00562 1244 aa13.47□□□□□ -0.25
ATP2C1-215ENST00000508660 MAGI1Q96QZ7 1491 aaPredicted RBP13.46□□□□□ -0.25
ATP2C1-215ENST00000508660 SYNJ2O15056 1496 aa13.45□□□□□ -0.26
ATP2C1-215ENST00000508660 SOGA1O94964 1423 aa13.45□□□□□ -0.26
ATP2C1-215ENST00000508660 FBXO41Q8TF61 875 aa13.44□□□□□ -0.26
ATP2C1-215ENST00000508660 SSUH2Q9Y2M2 353 aa13.44□□□□□ -0.26
ATP2C1-215ENST00000508660 FAM69CQ0P6D2 419 aa13.42□□□□□ -0.26
ATP2C1-215ENST00000508660 CCDC88BA6NC98 1476 aa13.42□□□□□ -0.26
ATP2C1-215ENST00000508660 HECW2Q9P2P5 1572 aa13.41□□□□□ -0.26
ATP2C1-215ENST00000508660 ZNF692Q9BU19 519 aaPredicted RBP13.41□□□□□ -0.26
ATP2C1-215ENST00000508660 GRIN2BQ13224 1484 aa13.39□□□□□ -0.27
ATP2C1-215ENST00000508660 ABCC10Q5T3U5 1492 aa13.37□□□□□ -0.27
ATP2C1-215ENST00000508660 PIP4P2Q8N4L2 257 aa13.37□□□□□ -0.27
ATP2C1-215ENST00000508660 KDM6BO15054 1643 aa13.37□□□□□ -0.27
ATP2C1-215ENST00000508660 WDR97A6NE52 1622 aa13.35□□□□□ -0.27
ATP2C1-215ENST00000508660 ADGRL1O94910 1474 aa13.34□□□□□ -0.27
ATP2C1-215ENST00000508660 CEP170Q5SW79 1584 aa13.33□□□□□ -0.28
ATP2C1-215ENST00000508660 FXR2P51116 673 aaKnown RBP eCLIP13.33□□□□□ -0.28
ATP2C1-215ENST00000508660 LMTK3Q96Q04 1460 aa13.32□□□□□ -0.28
ATP2C1-215ENST00000508660 FGD5Q6ZNL6 1462 aa13.3□□□□□ -0.28
ATP2C1-215ENST00000508660 DIP2BQ9P265 1576 aa13.29□□□□□ -0.28
ATP2C1-215ENST00000508660 ILDR2Q71H61 639 aa13.28□□□□□ -0.28
ATP2C1-215ENST00000508660 TSPOAP1O95153 1857 aa13.27□□□□□ -0.29
ATP2C1-215ENST00000508660 SOCS7O14512 581 aa13.26□□□□□ -0.29
ATP2C1-215ENST00000508660 PBRM1Q86U86 1689 aa13.26□□□□□ -0.29
ATP2C1-215ENST00000508660 SHROOM2Q13796 1616 aa13.25□□□□□ -0.29
ATP2C1-215ENST00000508660 SPDYE1Q8NFV5 336 aaPredicted RBP13.24□□□□□ -0.29
ATP2C1-215ENST00000508660 MAPKBP1O60336 1514 aa13.23□□□□□ -0.29
ATP2C1-215ENST00000508660 NUP160Q12769 1436 aa13.23□□□□□ -0.29
ATP2C1-215ENST00000508660 GRIN2AQ12879 1464 aa13.23□□□□□ -0.29
ATP2C1-215ENST00000508660 CLEC11AQ9Y240 323 aa13.22□□□□□ -0.29
ATP2C1-215ENST00000508660 CUX1P39880 1505 aa13.19□□□□□ -0.3
ATP2C1-215ENST00000508660 NPM1P06748 294 aaKnown RBP eCLIP13.19□□□□□ -0.3
ATP2C1-215ENST00000508660 PRG4Q92954 1404 aaPredicted RBP13.17□□□□□ -0.3
ATP2C1-215ENST00000508660 ABCA5Q8WWZ7 1642 aa13.15□□□□□ -0.3
ATP2C1-215ENST00000508660 ADCY10Q96PN6 1610 aa13.14□□□□□ -0.31
ATP2C1-215ENST00000508660 COL17A1Q9UMD9 1497 aaPredicted RBP13.13□□□□□ -0.31
ATP2C1-215ENST00000508660 JPH4Q96JJ6 628 aa13.12□□□□□ -0.31
ATP2C1-215ENST00000508660 ABCA10Q8WWZ4 1543 aa13.1□□□□□ -0.31
ATP2C1-215ENST00000508660 PPRC1Q5VV67 1664 aaKnown RBP13.1□□□□□ -0.31
ATP2C1-215ENST00000508660 ADAMTS12P58397 1594 aa13.1□□□□□ -0.31
ATP2C1-215ENST00000508660 PRKAR2AP13861 404 aaKnown RBP13.09□□□□□ -0.31
ATP2C1-215ENST00000508660 DISP3Q9P2K9 1392 aa13.08□□□□□ -0.31
ATP2C1-215ENST00000508660 SPDYE4A6NLX3 237 aa13.08□□□□□ -0.32
ATP2C1-215ENST00000508660 FHAD1B1AJZ9 1412 aa13.04□□□□□ -0.32
ATP2C1-215ENST00000508660 CHADLQ6NUI6 762 aa13.03□□□□□ -0.32
ATP2C1-215ENST00000508660 HAX1O00165 279 aa13.02□□□□□ -0.33
ATP2C1-215ENST00000508660 PRR29P0C7W0 189 aa13.02□□□□□ -0.33
ATP2C1-215ENST00000508660 EVX2Q03828 476 aa13.02□□□□□ -0.33
ATP2C1-215ENST00000508660 SP7Q8TDD2 431 aaPredicted RBP13□□□□□ -0.33
ATP2C1-215ENST00000508660 TOP2BQ02880 1626 aa12.99□□□□□ -0.33
ATP2C1-215ENST00000508660 GLI2P10070 1586 aa12.98□□□□□ -0.33
ATP2C1-215ENST00000508660 ASXL2Q76L83 1435 aa12.94□□□□□ -0.34
ATP2C1-215ENST00000508660 RUSC2Q8N2Y8 1516 aa12.93□□□□□ -0.34
ATP2C1-215ENST00000508660 CERKQ8TCT0 537 aa12.92□□□□□ -0.34
ATP2C1-215ENST00000508660 PLB1Q6P1J6 1458 aa12.9□□□□□ -0.34
ATP2C1-215ENST00000508660 ERICH3Q5RHP9 1530 aa12.88□□□□□ -0.35
ATP2C1-215ENST00000508660 C19orf67A6NJJ6 358 aa12.88□□□□□ -0.35
ATP2C1-215ENST00000508660 MAP3K4Q9Y6R4 1608 aa12.88□□□□□ -0.35
ATP2C1-215ENST00000508660 ABCC2Q92887 1545 aa12.88□□□□□ -0.35
ATP2C1-215ENST00000508660 PROM2Q8N271 834 aa12.87□□□□□ -0.35
ATP2C1-215ENST00000508660 WRNQ14191 1432 aaPredicted RBP eCLIP12.87□□□□□ -0.35
ATP2C1-215ENST00000508660 PTPRMP28827 1452 aa12.86□□□□□ -0.35
ATP2C1-215ENST00000508660 SPATA31D1Q6ZQQ2 1576 aa12.86□□□□□ -0.35
ATP2C1-215ENST00000508660 EPRSP07814 1512 aaKnown RBP12.85□□□□□ -0.35
ATP2C1-215ENST00000508660 PTPRGP23470 1445 aa12.85□□□□□ -0.35
ATP2C1-215ENST00000508660 TTBK1Q5TCY1 1321 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms