RNA–Protein interactions for RNA: ENST00000508502.5

SEC31A-227, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC31A, Length 3,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-227ENST00000508502 LRRC9Q6ZRR7 1453 aa14.27□□□□□ -0.12
SEC31A-227ENST00000508502 FHAD1B1AJZ9 1412 aa14.27□□□□□ -0.12
SEC31A-227ENST00000508502 NESP48681 1621 aa14.27□□□□□ -0.13
SEC31A-227ENST00000508502 TOPBP1Q92547 1522 aa14.27□□□□□ -0.13
SEC31A-227ENST00000508502 ATP1B4Q9UN42 357 aaPredicted RBP14.27□□□□□ -0.13
SEC31A-227ENST00000508502 POLA1P09884 1462 aaPredicted RBP14.26□□□□□ -0.13
SEC31A-227ENST00000508502 ABCA10Q8WWZ4 1543 aa14.26□□□□□ -0.13
SEC31A-227ENST00000508502 RAB3GAP2Q9H2M9 1393 aa14.25□□□□□ -0.13
SEC31A-227ENST00000508502 PHLDB1Q86UU1 1377 aa14.24□□□□□ -0.13
SEC31A-227ENST00000508502 PCF11O94913 1555 aaKnown RBP14.23□□□□□ -0.13
SEC31A-227ENST00000508502 FAM50AQ14320 339 aaKnown RBP14.22□□□□□ -0.13
SEC31A-227ENST00000508502 FHOD3Q2V2M9 1422 aa14.22□□□□□ -0.13
SEC31A-227ENST00000508502 CFAP43Q8NDM7 1665 aa14.2□□□□□ -0.14
SEC31A-227ENST00000508502 SETD5Q9C0A6 1442 aa14.2□□□□□ -0.14
SEC31A-227ENST00000508502 CUL7Q14999 1698 aa14.18□□□□□ -0.14
SEC31A-227ENST00000508502 EFCAB5A4FU69 1503 aa14.17□□□□□ -0.14
SEC31A-227ENST00000508502 MAPKBP1O60336 1514 aa14.17□□□□□ -0.14
SEC31A-227ENST00000508502 FYCO1Q9BQS8 1478 aa14.16□□□□□ -0.14
SEC31A-227ENST00000508502 URB2Q14146 1524 aaKnown RBP14.15□□□□□ -0.14
SEC31A-227ENST00000508502 CASKIN1Q8WXD9 1431 aa14.15□□□□□ -0.14
SEC31A-227ENST00000508502 LAMC3Q9Y6N6 1575 aa14.14□□□□□ -0.15
SEC31A-227ENST00000508502 CTTNBP2Q8WZ74 1663 aa14.14□□□□□ -0.15
SEC31A-227ENST00000508502 TDRD9Q8NDG6 1382 aaKnown RBP14.13□□□□□ -0.15
SEC31A-227ENST00000508502 AQRO60306 1485 aaKnown RBP eCLIP14.13□□□□□ -0.157e-7■■■■□ 21.1
SEC31A-227ENST00000508502 FMN1Q68DA7 1419 aa14.11□□□□□ -0.15
SEC31A-227ENST00000508502 WDR97A6NE52 1622 aa14.1□□□□□ -0.15
SEC31A-227ENST00000508502 SIN3AQ96ST3 1273 aa14.1□□□□□ -0.15
SEC31A-227ENST00000508502 GAPVD1Q14C86 1478 aa14.08□□□□□ -0.16
SEC31A-227ENST00000508502 PDS5BQ9NTI5 1447 aa14.07□□□□□ -0.16
SEC31A-227ENST00000508502 ABCA5Q8WWZ7 1642 aa14.07□□□□□ -0.16
SEC31A-227ENST00000508502 SNAPC4Q5SXM2 1469 aa14.07□□□□□ -0.16
SEC31A-227ENST00000508502 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.06□□□□□ -0.16
SEC31A-227ENST00000508502 DNAJC5BQ9UF47 199 aa14.06□□□□□ -0.16
SEC31A-227ENST00000508502 MTUS2Q5JR59 1369 aa14.06□□□□□ -0.16
SEC31A-227ENST00000508502 FGD6Q6ZV73 1430 aa14.05□□□□□ -0.16
SEC31A-227ENST00000508502 SAMD9Q5K651 1589 aa14.03□□□□□ -0.16
SEC31A-227ENST00000508502 KIF21AQ7Z4S6 1674 aa14□□□□□ -0.17
SEC31A-227ENST00000508502 TIMELESSQ9UNS1 1208 aa14□□□□□ -0.17
SEC31A-227ENST00000508502 GRIN2BQ13224 1484 aa13.99□□□□□ -0.17
SEC31A-227ENST00000508502 LRRIQ1Q96JM4 1722 aa13.98□□□□□ -0.17
SEC31A-227ENST00000508502 NCOA2Q15596 1464 aa13.97□□□□□ -0.17
SEC31A-227ENST00000508502 PTPRKQ15262 1439 aa13.97□□□□□ -0.17
SEC31A-227ENST00000508502 CCDC18Q5T9S5 1454 aa13.96□□□□□ -0.17
SEC31A-227ENST00000508502 TARBP1Q13395 1621 aaKnown RBP13.96□□□□□ -0.17
SEC31A-227ENST00000508502 MYOM3Q5VTT5 1437 aa13.96□□□□□ -0.17
SEC31A-227ENST00000508502 PPP1R15AO75807 674 aaPredicted RBP13.96□□□□□ -0.17
SEC31A-227ENST00000508502 DDX10Q13206 875 aaKnown RBP13.96□□□□□ -0.17
SEC31A-227ENST00000508502 HFM1A2PYH4 1435 aa13.95□□□□□ -0.18
SEC31A-227ENST00000508502 KCNH8Q96L42 1107 aa13.95□□□□□ -0.18
SEC31A-227ENST00000508502 THOC2Q8NI27 1593 aaKnown RBP13.95□□□□□ -0.18
SEC31A-227ENST00000508502 SUPT6HQ7KZ85 1726 aaKnown RBP13.94□□□□□ -0.18
SEC31A-227ENST00000508502 EHBP1L1Q8N3D4 1523 aa13.93□□□□□ -0.18
SEC31A-227ENST00000508502 HIRIP3Q9BW71 556 aaPredicted RBP13.93□□□□□ -0.18
SEC31A-227ENST00000508502 PTPN23Q9H3S7 1636 aa13.92□□□□□ -0.18
SEC31A-227ENST00000508502 UACAQ9BZF9 1416 aa13.92□□□□□ -0.18
SEC31A-227ENST00000508502 TONSLQ96HA7 1378 aa13.92□□□□□ -0.18
SEC31A-227ENST00000508502 NAIPQ13075 1403 aa13.91□□□□□ -0.18
SEC31A-227ENST00000508502 MAGI3Q5TCQ9 1506 aa13.9□□□□□ -0.19
SEC31A-227ENST00000508502 PBRM1Q86U86 1689 aa13.89□□□□□ -0.19
SEC31A-227ENST00000508502 UGGT2Q9NYU1 1516 aa13.89□□□□□ -0.19
SEC31A-227ENST00000508502 SUPT16HQ9Y5B9 1047 aaKnown RBP13.88□□□□□ -0.19
SEC31A-227ENST00000508502 IQGAP2Q13576 1575 aa13.88□□□□□ -0.19
SEC31A-227ENST00000508502 ARHGEF11O15085 1522 aa13.87□□□□□ -0.19
SEC31A-227ENST00000508502 RRP7BPQ9NSQ0 103 aa13.86□□□□□ -0.19
SEC31A-227ENST00000508502 CHIC2Q9UKJ5 165 aa13.86□□□□□ -0.19
SEC31A-227ENST00000508502 HECW1Q76N89 1606 aa13.86□□□□□ -0.19
SEC31A-227ENST00000508502 ARID3CA6NKF2 412 aa13.86□□□□□ -0.19
SEC31A-227ENST00000508502 ADAMTS12P58397 1594 aa13.86□□□□□ -0.19
SEC31A-227ENST00000508502 MRC2Q9UBG0 1479 aa13.85□□□□□ -0.19
SEC31A-227ENST00000508502 EPRSP07814 1512 aaKnown RBP13.85□□□□□ -0.19
SEC31A-227ENST00000508502 CDK13Q14004 1512 aaKnown RBP13.83□□□□□ -0.2
SEC31A-227ENST00000508502 TCOF1Q13428 1488 aaKnown RBP13.82□□□□□ -0.2
SEC31A-227ENST00000508502 ANP32CO43423 234 aa13.81□□□□□ -0.2
SEC31A-227ENST00000508502 TRIM52Q96A61 297 aa13.81□□□□□ -0.2
SEC31A-227ENST00000508502 WDR62O43379 1518 aa13.8□□□□□ -0.2
SEC31A-227ENST00000508502 ZNF608Q9ULD9 1512 aaPredicted RBP13.79□□□□□ -0.2
SEC31A-227ENST00000508502 MIA2Q96PC5 1412 aa13.78□□□□□ -0.2
SEC31A-227ENST00000508502 CCER2I3L3R5 266 aa13.77□□□□□ -0.2
SEC31A-227ENST00000508502 GCC2Q8IWJ2 1684 aa13.77□□□□□ -0.21
SEC31A-227ENST00000508502 IFT140Q96RY7 1462 aa13.77□□□□□ -0.21
SEC31A-227ENST00000508502 AKNAQ7Z591 1439 aa13.76□□□□□ -0.21
SEC31A-227ENST00000508502 KDM5BQ9UGL1 1544 aa13.76□□□□□ -0.21
SEC31A-227ENST00000508502 KDM6BO15054 1643 aa13.75□□□□□ -0.21
SEC31A-227ENST00000508502 DENND4BO75064 1496 aaPredicted RBP13.74□□□□□ -0.21
SEC31A-227ENST00000508502 KIAA0586Q9BVV6 1533 aa13.74□□□□□ -0.21
SEC31A-227ENST00000508502 MPHOSPH9Q99550 1183 aa13.74□□□□□ -0.21
SEC31A-227ENST00000508502 DISP1Q96F81 1524 aa13.73□□□□□ -0.21
SEC31A-227ENST00000508502 KIAA0556O60303 1618 aa13.72□□□□□ -0.21
SEC31A-227ENST00000508502 FOXD1Q16676 465 aa13.71□□□□□ -0.22
SEC31A-227ENST00000508502 NUP153P49790 1475 aaKnown RBP13.7□□□□□ -0.22
SEC31A-227ENST00000508502 HSPA5P11021 654 aaKnown RBP13.7□□□□□ -0.22
SEC31A-227ENST00000508502 DAPK1P53355 1430 aa13.7□□□□□ -0.22
SEC31A-227ENST00000508502 GRIN2AQ12879 1464 aa13.7□□□□□ -0.22
SEC31A-227ENST00000508502 ZNF644Q9H582 1327 aaPredicted RBP13.69□□□□□ -0.22
SEC31A-227ENST00000508502 CDK11AQ9UQ88 783 aaPredicted RBP13.69□□□□□ -0.22
SEC31A-227ENST00000508502 FKBP8Q14318 412 aa13.68□□□□□ -0.22
SEC31A-227ENST00000508502 BCANQ96GW7 911 aa13.68□□□□□ -0.22
SEC31A-227ENST00000508502 L3MBTL2Q969R5 705 aa13.68□□□□□ -0.22
SEC31A-227ENST00000508502 RAPGEF6Q8TEU7 1601 aa13.67□□□□□ -0.22
SEC31A-227ENST00000508502 ABCC5O15440 1437 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms