RNA–Protein interactions for RNA: ENST00000508502.5

SEC31A-227, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC31A, Length 3,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-227ENST00000508502 NISCHQ9Y2I1 1504 aa20.29■□□□□ 0.84
SEC31A-227ENST00000508502 SHROOM4Q9ULL8 1493 aa17.32■□□□□ 0.36
SEC31A-227ENST00000508502 CCDC180Q9P1Z9 1646 aa17.25■□□□□ 0.35
SEC31A-227ENST00000508502 ZCCHC6Q5VYS8 1495 aaKnown RBP17.16■□□□□ 0.34
SEC31A-227ENST00000508502 SUPT5HO00267 1087 aaKnown RBP16.99■□□□□ 0.31
SEC31A-227ENST00000508502 DCAF8L2P0C7V8 631 aa16.88■□□□□ 0.29
SEC31A-227ENST00000508502 DCAF1Q9Y4B6 1507 aa16.64■□□□□ 0.25
SEC31A-227ENST00000508502 CHIC1Q5VXU3 224 aa16.49■□□□□ 0.23
SEC31A-227ENST00000508502 MYO15BQ96JP2 1530 aa16.4■□□□□ 0.22
SEC31A-227ENST00000508502 SCRIBQ14160 1630 aa16.18■□□□□ 0.18
SEC31A-227ENST00000508502 ABCC9O60706 1549 aa16.18■□□□□ 0.18
SEC31A-227ENST00000508502 RSF1Q96T23 1441 aaPredicted RBP16.06■□□□□ 0.16
SEC31A-227ENST00000508502 LOC105371045A0A1W2PR82 267 aa16.01■□□□□ 0.15
SEC31A-227ENST00000508502 PCGF6Q9BYE7 350 aa15.98■□□□□ 0.15
SEC31A-227ENST00000508502 NACADO15069 1562 aa15.96■□□□□ 0.15
SEC31A-227ENST00000508502 HRCP23327 699 aa15.95■□□□□ 0.14
SEC31A-227ENST00000508502 RB1CC1Q8TDY2 1594 aa15.88■□□□□ 0.13
SEC31A-227ENST00000508502 CECR2Q9BXF3 1484 aa15.84■□□□□ 0.13
SEC31A-227ENST00000508502 TRIM41Q8WV44 630 aa15.82■□□□□ 0.12
SEC31A-227ENST00000508502 MROH2BQ7Z745 1585 aa15.78■□□□□ 0.12
SEC31A-227ENST00000508502 FAM9AQ8IZU1 332 aaPredicted RBP15.7■□□□□ 0.1
SEC31A-227ENST00000508502 WIZO95785 1651 aa15.69■□□□□ 0.1
SEC31A-227ENST00000508502 TRIM26Q12899 539 aaPredicted RBP15.67■□□□□ 0.1
SEC31A-227ENST00000508502 PPARGC1BQ86YN6 1023 aaKnown RBP15.63■□□□□ 0.09
SEC31A-227ENST00000508502 BAZ1AQ9NRL2 1556 aaPredicted RBP15.59■□□□□ 0.09
SEC31A-227ENST00000508502 EHMT2Q96KQ7 1210 aa15.57■□□□□ 0.08
SEC31A-227ENST00000508502 SMARCA4P51532 1647 aa15.45■□□□□ 0.06
SEC31A-227ENST00000508502 UNC13AQ9UPW8 1703 aa15.45■□□□□ 0.06
SEC31A-227ENST00000508502 EIF4G1Q04637 1599 aaKnown RBP15.45■□□□□ 0.06
SEC31A-227ENST00000508502 TOP2AP11388 1531 aaKnown RBP15.44■□□□□ 0.06
SEC31A-227ENST00000508502 CCDC88BA6NC98 1476 aa15.39■□□□□ 0.05
SEC31A-227ENST00000508502 SMARCA2P51531 1590 aa15.36■□□□□ 0.05
SEC31A-227ENST00000508502 ABCC8Q09428 1581 aa15.34■□□□□ 0.05
SEC31A-227ENST00000508502 PABPN1Q86U42 306 aaKnown RBP eCLIP15.33■□□□□ 0.055e-7■■□□□ 13.7
SEC31A-227ENST00000508502 ZEB1P37275 1124 aaPredicted RBP15.33■□□□□ 0.04
SEC31A-227ENST00000508502 BICRAQ9NZM4 1560 aa15.27■□□□□ 0.04
SEC31A-227ENST00000508502 SOGA1O94964 1423 aa15.2■□□□□ 0.02
SEC31A-227ENST00000508502 PEG3Q9GZU2 1588 aa15.15■□□□□ 0.02
SEC31A-227ENST00000508502 CSRNP3Q8WYN3 585 aa15.13■□□□□ 0.01
SEC31A-227ENST00000508502 CEP162Q5TB80 1403 aa15.13■□□□□ 0.01
SEC31A-227ENST00000508502 EEA1Q15075 1411 aa15.12■□□□□ 0.01
SEC31A-227ENST00000508502 RUSC2Q8N2Y8 1516 aa15.12■□□□□ 0.01
SEC31A-227ENST00000508502 TNIKQ9UKE5 1360 aa15.11■□□□□ 0.01
SEC31A-227ENST00000508502 WRNQ14191 1432 aaPredicted RBP eCLIP15.09■□□□□ 0.01
SEC31A-227ENST00000508502 UBTFP17480 764 aaKnown RBP15.08■□□□□ 0.01
SEC31A-227ENST00000508502 ATAD2BQ9ULI0 1458 aa15.07■□□□□ 0
SEC31A-227ENST00000508502 TTBK1Q5TCY1 1321 aaPredicted RBP15.07■□□□□ 0
SEC31A-227ENST00000508502 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.06■□□□□ 0
SEC31A-227ENST00000508502 BAZ1BQ9UIG0 1483 aaKnown RBP15.04■□□□□ -0
SEC31A-227ENST00000508502 CCER1Q8TC90 406 aaPredicted RBP15.03■□□□□ -0
SEC31A-227ENST00000508502 GOLGA3Q08378 1498 aa15.02■□□□□ -0
SEC31A-227ENST00000508502 SYNJ1O43426 1573 aa15.01□□□□□ -0.01
SEC31A-227ENST00000508502 CEP164Q9UPV0 1460 aa14.94□□□□□ -0.02
SEC31A-227ENST00000508502 KIF21BO75037 1637 aa14.9□□□□□ -0.02
SEC31A-227ENST00000508502 CLIP1P30622 1438 aa14.86□□□□□ -0.03
SEC31A-227ENST00000508502 RAPGEF2Q9Y4G8 1499 aa14.83□□□□□ -0.04
SEC31A-227ENST00000508502 TOP2BQ02880 1626 aa14.82□□□□□ -0.04
SEC31A-227ENST00000508502 RANGAP1P46060 587 aaPredicted RBP14.79□□□□□ -0.04
SEC31A-227ENST00000508502 VPS8Q8N3P4 1428 aa14.78□□□□□ -0.04
SEC31A-227ENST00000508502 NCAPD3P42695 1498 aa14.78□□□□□ -0.04
SEC31A-227ENST00000508502 HMGXB3Q12766 1538 aa14.76□□□□□ -0.05
SEC31A-227ENST00000508502 BIVM-ERCC5R4GMW8 1640 aa14.76□□□□□ -0.05
SEC31A-227ENST00000508502 APLP2Q06481 763 aa14.76□□□□□ -0.05
SEC31A-227ENST00000508502 HNRNPUL2Q1KMD3 747 aaKnown RBP14.74□□□□□ -0.05
SEC31A-227ENST00000508502 DIEXFQ68CQ4 756 aaKnown RBP14.71□□□□□ -0.06
SEC31A-227ENST00000508502 CUX1P39880 1505 aa14.69□□□□□ -0.06
SEC31A-227ENST00000508502 PRXQ9BXM0 1461 aa14.68□□□□□ -0.06
SEC31A-227ENST00000508502 SCAF1Q9H7N4 1312 aaKnown RBP14.67□□□□□ -0.06
SEC31A-227ENST00000508502 ERICH3Q5RHP9 1530 aa14.67□□□□□ -0.06
SEC31A-227ENST00000508502 CFTRP13569 1480 aa14.66□□□□□ -0.06
SEC31A-227ENST00000508502 KIF27Q86VH2 1401 aa14.63□□□□□ -0.07
SEC31A-227ENST00000508502 ZNF316A6NFI3 1004 aaPredicted RBP14.61□□□□□ -0.07
SEC31A-227ENST00000508502 ARAP1Q96P48 1450 aa14.6□□□□□ -0.07
SEC31A-227ENST00000508502 ACIN1Q9UKV3 1341 aaKnown RBP14.56□□□□□ -0.08
SEC31A-227ENST00000508502 NEUROD1Q13562 356 aa14.54□□□□□ -0.08
SEC31A-227ENST00000508502 KANK4Q5T7N3 995 aaPredicted RBP14.54□□□□□ -0.08
SEC31A-227ENST00000508502 PRDM2Q13029 1718 aa14.51□□□□□ -0.09
SEC31A-227ENST00000508502 CADPSQ9ULU8 1353 aa14.51□□□□□ -0.09
SEC31A-227ENST00000508502 CENPBP07199 599 aaPredicted RBP14.5□□□□□ -0.09
SEC31A-227ENST00000508502 CUX2O14529 1486 aa14.5□□□□□ -0.09
SEC31A-227ENST00000508502 ARHGAP35Q9NRY4 1499 aa14.48□□□□□ -0.09
SEC31A-227ENST00000508502 IGF1RP08069 1367 aa14.47□□□□□ -0.09
SEC31A-227ENST00000508502 FGD5Q6ZNL6 1462 aa14.44□□□□□ -0.1
SEC31A-227ENST00000508502 RRBP1Q9P2E9 1410 aaKnown RBP14.43□□□□□ -0.1
SEC31A-227ENST00000508502 CARMIL1Q5VZK9 1371 aa14.42□□□□□ -0.1
SEC31A-227ENST00000508502 DHX57Q6P158 1386 aaKnown RBP14.42□□□□□ -0.1
SEC31A-227ENST00000508502 CC2D2AQ9P2K1 1620 aa14.41□□□□□ -0.1
SEC31A-227ENST00000508502 CLSPNQ9HAW4 1339 aa14.41□□□□□ -0.1
SEC31A-227ENST00000508502 GTF3C3Q9Y5Q9 886 aa14.4□□□□□ -0.1
SEC31A-227ENST00000508502 MIER1Q8N108 512 aa14.39□□□□□ -0.11
SEC31A-227ENST00000508502 CCNB3Q8WWL7 1395 aa14.39□□□□□ -0.11
SEC31A-227ENST00000508502 YTHDC1Q96MU7 727 aaKnown RBP14.37□□□□□ -0.11
SEC31A-227ENST00000508502 FANCD2Q9BXW9 1451 aa14.37□□□□□ -0.11
SEC31A-227ENST00000508502 ITGAEP38570 1179 aa14.36□□□□□ -0.11
SEC31A-227ENST00000508502 PELP1Q8IZL8 1130 aaKnown RBP14.33□□□□□ -0.11
SEC31A-227ENST00000508502 TIAM1Q13009 1591 aa14.32□□□□□ -0.12
SEC31A-227ENST00000508502 P3H3Q8IVL6 736 aa14.3□□□□□ -0.12
SEC31A-227ENST00000508502 MAP3K1Q13233 1512 aa14.3□□□□□ -0.12
SEC31A-227ENST00000508502 RAD54L2Q9Y4B4 1467 aa14.3□□□□□ -0.12
SEC31A-227ENST00000508502 DNMBPQ6XZF7 1577 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms