RNA–Protein interactions for RNA: ENST00000507993.5

TTC39B-207, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 1,950 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-207ENST00000507993 NBR1Q14596 966 aa10.31□□□□□ -0.76
TTC39B-207ENST00000507993 BBXQ8WY36 941 aaPredicted RBP10.3□□□□□ -0.76
TTC39B-207ENST00000507993 TSHZ2Q9NRE2 1034 aa10.3□□□□□ -0.76
TTC39B-207ENST00000507993 SUPT5HO00267 1087 aaKnown RBP10.3□□□□□ -0.76
TTC39B-207ENST00000507993 NPM2Q86SE8 214 aaKnown RBP10.26□□□□□ -0.77
TTC39B-207ENST00000507993 NPM1P06748 294 aaKnown RBP eCLIP10.26□□□□□ -0.77
TTC39B-207ENST00000507993 FBXO3Q9UK99 471 aa10.24□□□□□ -0.77
TTC39B-207ENST00000507993 PCGF6Q9BYE7 350 aa10.23□□□□□ -0.77
TTC39B-207ENST00000507993 IFNLR1Q8IU57 520 aaPredicted RBP10.19□□□□□ -0.78
TTC39B-207ENST00000507993 TRIM26Q12899 539 aaPredicted RBP10.19□□□□□ -0.78
TTC39B-207ENST00000507993 VASPP50552 380 aaPredicted RBP10.17□□□□□ -0.78
TTC39B-207ENST00000507993 DNAJC5Q9H3Z4 198 aa10.17□□□□□ -0.78
TTC39B-207ENST00000507993 BCL11AQ9H165 835 aa10.16□□□□□ -0.78
TTC39B-207ENST00000507993 UBTFP17480 764 aaKnown RBP10.14□□□□□ -0.79
TTC39B-207ENST00000507993 ZEB1P37275 1124 aaPredicted RBP10.14□□□□□ -0.79
TTC39B-207ENST00000507993 SPRYD3Q8NCJ5 442 aa10.14□□□□□ -0.79
TTC39B-207ENST00000507993 EIF5BO60841 1220 aaKnown RBP10.11□□□□□ -0.79
TTC39B-207ENST00000507993 RBM42Q9BTD8 480 aaKnown RBP10.07□□□□□ -0.8
TTC39B-207ENST00000507993 NCAPD3P42695 1498 aa10.06□□□□□ -0.8
TTC39B-207ENST00000507993 ATAD2BQ9ULI0 1458 aa10.06□□□□□ -0.8
TTC39B-207ENST00000507993 NESP48681 1621 aa10.05□□□□□ -0.8
TTC39B-207ENST00000507993 ERCC6Q03468 1493 aa10.04□□□□□ -0.8
TTC39B-207ENST00000507993 ACIN1Q9UKV3 1341 aaKnown RBP10.04□□□□□ -0.8
TTC39B-207ENST00000507993 OSCARQ8IYS5 282 aa10.01□□□□□ -0.81
TTC39B-207ENST00000507993 SMARCA4P51532 1647 aa10.01□□□□□ -0.81
TTC39B-207ENST00000507993 ECM2O94769 699 aaPredicted RBP9.99□□□□□ -0.81
TTC39B-207ENST00000507993 ZBTB12Q9Y330 459 aaPredicted RBP9.99□□□□□ -0.81
TTC39B-207ENST00000507993 MKRN4PQ13434 485 aaPredicted RBP9.98□□□□□ -0.81
TTC39B-207ENST00000507993 CHRDL2Q6WN34 429 aa9.98□□□□□ -0.81
TTC39B-207ENST00000507993 CUX2O14529 1486 aa9.98□□□□□ -0.81
TTC39B-207ENST00000507993 SMARCA2P51531 1590 aa9.95□□□□□ -0.82
TTC39B-207ENST00000507993 FAM9AQ8IZU1 332 aaPredicted RBP9.94□□□□□ -0.82
TTC39B-207ENST00000507993 MROH2BQ7Z745 1585 aa9.94□□□□□ -0.82
TTC39B-207ENST00000507993 BAZ1BQ9UIG0 1483 aaKnown RBP9.94□□□□□ -0.82
TTC39B-207ENST00000507993 HMGXB3Q12766 1538 aa9.94□□□□□ -0.82
TTC39B-207ENST00000507993 RGL2O15211 777 aa9.92□□□□□ -0.82
TTC39B-207ENST00000507993 SPDYE4A6NLX3 237 aa9.91□□□□□ -0.82
TTC39B-207ENST00000507993 BAZ1AQ9NRL2 1556 aaPredicted RBP9.91□□□□□ -0.82
TTC39B-207ENST00000507993 NEUROD1Q13562 356 aa9.9□□□□□ -0.82
TTC39B-207ENST00000507993 CENPBP07199 599 aaPredicted RBP9.88□□□□□ -0.83
TTC39B-207ENST00000507993 SP7Q8TDD2 431 aaPredicted RBP9.87□□□□□ -0.83
TTC39B-207ENST00000507993 THOC2Q8NI27 1593 aaKnown RBP9.86□□□□□ -0.83
TTC39B-207ENST00000507993 PEG3Q9GZU2 1588 aa9.86□□□□□ -0.83
TTC39B-207ENST00000507993 BRPF1P55201 1214 aaPredicted RBP9.85□□□□□ -0.83
TTC39B-207ENST00000507993 PROM2Q8N271 834 aa9.85□□□□□ -0.83
TTC39B-207ENST00000507993 KIF21AQ7Z4S6 1674 aa9.84□□□□□ -0.83
TTC39B-207ENST00000507993 CHGAP10645 457 aaKnown RBP9.84□□□□□ -0.83
TTC39B-207ENST00000507993 AKT1S1Q96B36 256 aa9.83□□□□□ -0.84
TTC39B-207ENST00000507993 LAMC3Q9Y6N6 1575 aa9.81□□□□□ -0.84
TTC39B-207ENST00000507993 WIZO95785 1651 aa9.81□□□□□ -0.84
TTC39B-207ENST00000507993 REM2Q8IYK8 340 aaPredicted RBP9.79□□□□□ -0.84
TTC39B-207ENST00000507993 CADPSQ9ULU8 1353 aa9.78□□□□□ -0.84
TTC39B-207ENST00000507993 PDS5BQ9NTI5 1447 aa9.78□□□□□ -0.84
TTC39B-207ENST00000507993 SPDYE2BA6NHP3 402 aa9.77□□□□□ -0.85
TTC39B-207ENST00000507993 SPDYE6P0CI01 402 aa9.77□□□□□ -0.85
TTC39B-207ENST00000507993 SPDYE2Q495Y8 402 aa9.77□□□□□ -0.85
TTC39B-207ENST00000507993 TRIM41Q8WV44 630 aa9.77□□□□□ -0.85
TTC39B-207ENST00000507993 SPOCK2Q92563 424 aa9.76□□□□□ -0.85
TTC39B-207ENST00000507993 ARID3AQ99856 593 aa9.76□□□□□ -0.85
TTC39B-207ENST00000507993 LOC105371045A0A1W2PR82 267 aa9.75□□□□□ -0.85
TTC39B-207ENST00000507993 SSUH2Q9Y2M2 353 aa9.72□□□□□ -0.85
TTC39B-207ENST00000507993 MRC2Q9UBG0 1479 aa9.72□□□□□ -0.85
TTC39B-207ENST00000507993 ZNF692Q9BU19 519 aaPredicted RBP9.71□□□□□ -0.86
TTC39B-207ENST00000507993 PITPNM1O00562 1244 aa9.7□□□□□ -0.86
TTC39B-207ENST00000507993 NEUROD2Q15784 382 aa9.7□□□□□ -0.86
TTC39B-207ENST00000507993 CCDC9Q9Y3X0 531 aaKnown RBP9.7□□□□□ -0.86
TTC39B-207ENST00000507993 WDR62O43379 1518 aa9.69□□□□□ -0.86
TTC39B-207ENST00000507993 RSF1Q96T23 1441 aaPredicted RBP9.69□□□□□ -0.86
TTC39B-207ENST00000507993 PLEKHG5O94827 1062 aa9.68□□□□□ -0.86
TTC39B-207ENST00000507993 FANCD2Q9BXW9 1451 aa9.68□□□□□ -0.86
TTC39B-207ENST00000507993 ANP32EQ9BTT0 268 aa9.67□□□□□ -0.86
TTC39B-207ENST00000507993 CEP164Q9UPV0 1460 aa9.67□□□□□ -0.86
TTC39B-207ENST00000507993 ZMYND15Q9H091 742 aa9.66□□□□□ -0.86
TTC39B-207ENST00000507993 LMOD2Q6P5Q4 547 aa9.66□□□□□ -0.86
TTC39B-207ENST00000507993 UBE2Q2Q8WVN8 375 aa9.66□□□□□ -0.86
TTC39B-207ENST00000507993 RSPH6AQ9H0K4 717 aa9.64□□□□□ -0.87
TTC39B-207ENST00000507993 CFTRP13569 1480 aa9.64□□□□□ -0.87
TTC39B-207ENST00000507993 URB2Q14146 1524 aaKnown RBP9.63□□□□□ -0.87
TTC39B-207ENST00000507993 ZBTB7CA1YPR0 619 aa9.63□□□□□ -0.87
TTC39B-207ENST00000507993 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.63□□□□□ -0.87
TTC39B-207ENST00000507993 PIP4P2Q8N4L2 257 aa9.63□□□□□ -0.87
TTC39B-207ENST00000507993 DIEXFQ68CQ4 756 aaKnown RBP9.62□□□□□ -0.87
TTC39B-207ENST00000507993 CLSPNQ9HAW4 1339 aa9.62□□□□□ -0.87
TTC39B-207ENST00000507993 HAX1O00165 279 aa9.61□□□□□ -0.87
TTC39B-207ENST00000507993 C1orf115Q9H7X2 142 aa9.61□□□□□ -0.87
TTC39B-207ENST00000507993 TOP2AP11388 1531 aaKnown RBP9.6□□□□□ -0.87
TTC39B-207ENST00000507993 NECTIN2Q92692 538 aa9.58□□□□□ -0.88
TTC39B-207ENST00000507993 HS6ST3Q8IZP7 471 aa9.57□□□□□ -0.88
TTC39B-207ENST00000507993 CLEC11AQ9Y240 323 aa9.57□□□□□ -0.88
TTC39B-207ENST00000507993 CCDC88BA6NC98 1476 aa9.56□□□□□ -0.88
TTC39B-207ENST00000507993 ZNF608Q9ULD9 1512 aaPredicted RBP9.56□□□□□ -0.88
TTC39B-207ENST00000507993 PDIA4P13667 645 aaKnown RBP9.56□□□□□ -0.88
TTC39B-207ENST00000507993 FXR2P51116 673 aaKnown RBP eCLIP9.55□□□□□ -0.88
TTC39B-207ENST00000507993 PLSCR2Q9NRY7 297 aa9.55□□□□□ -0.88
TTC39B-207ENST00000507993 NKX1-1Q15270 411 aaPredicted RBP9.54□□□□□ -0.88
TTC39B-207ENST00000507993 SPDYE1Q8NFV5 336 aaPredicted RBP9.54□□□□□ -0.88
TTC39B-207ENST00000507993 SLC24A3Q9HC58 644 aa9.53□□□□□ -0.88
TTC39B-207ENST00000507993 IGSF3O75054 1194 aa9.52□□□□□ -0.89
TTC39B-207ENST00000507993 GTPBP6O43824 516 aaPredicted RBP9.52□□□□□ -0.89
TTC39B-207ENST00000507993 ARID3CA6NKF2 412 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 1271.6 ms