RNA–Protein interactions for RNA: ENST00000507993.5

TTC39B-207, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 1,950 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-207ENST00000507993 AEBP2Q6ZN18 517 aaPredicted RBP17.91■□□□□ 0.46
TTC39B-207ENST00000507993 CHIC1Q5VXU3 224 aa17.1■□□□□ 0.33
TTC39B-207ENST00000507993 PHF23Q9BUL5 403 aaPredicted RBP15.1■□□□□ 0.01
TTC39B-207ENST00000507993 SENP3Q9H4L4 574 aaPredicted RBP15.09■□□□□ 0.01
TTC39B-207ENST00000507993 POTEDQ86YR6 584 aa14.31□□□□□ -0.12
TTC39B-207ENST00000507993 FOXD1Q16676 465 aa14.14□□□□□ -0.15
TTC39B-207ENST00000507993 PLPPR3Q6T4P5 718 aa13.71□□□□□ -0.22
TTC39B-207ENST00000507993 PPP6R1Q9UPN7 881 aa13.44□□□□□ -0.26
TTC39B-207ENST00000507993 MSH5O43196 834 aa13.41□□□□□ -0.26
TTC39B-207ENST00000507993 ADRA2BP18089 450 aa13.37□□□□□ -0.27
TTC39B-207ENST00000507993 PIAS4Q8N2W9 510 aaPredicted RBP13.22□□□□□ -0.29
TTC39B-207ENST00000507993 SLC24A1O60721 1099 aa13.21□□□□□ -0.29
TTC39B-207ENST00000507993 EHMT2Q96KQ7 1210 aa13.2□□□□□ -0.3
TTC39B-207ENST00000507993 NISCHQ9Y2I1 1504 aa12.82□□□□□ -0.36
TTC39B-207ENST00000507993 KCNA4P22459 653 aa12.45□□□□□ -0.42
TTC39B-207ENST00000507993 CSRNP3Q8WYN3 585 aa12.4□□□□□ -0.42
TTC39B-207ENST00000507993 RTN4Q9NQC3 1192 aaKnown RBP12.36□□□□□ -0.43
TTC39B-207ENST00000507993 MAPK8IP2Q13387 824 aaPredicted RBP12.25□□□□□ -0.45
TTC39B-207ENST00000507993 AMER1Q5JTC6 1135 aaPredicted RBP12.15□□□□□ -0.46
TTC39B-207ENST00000507993 PPP4R3CPQ6ZMV5 832 aa12.08□□□□□ -0.48
TTC39B-207ENST00000507993 SCAF1Q9H7N4 1312 aaKnown RBP12.05□□□□□ -0.48
TTC39B-207ENST00000507993 DMRT2Q9Y5R5 561 aa12.03□□□□□ -0.48
TTC39B-207ENST00000507993 SLC4A1APQ9BWU0 796 aaKnown RBP12□□□□□ -0.49
TTC39B-207ENST00000507993 NCBP3Q53F19 620 aaKnown RBP11.83□□□□□ -0.52
TTC39B-207ENST00000507993 CACNB1Q02641 598 aaPredicted RBP11.77□□□□□ -0.53
TTC39B-207ENST00000507993 CNKSR2Q8WXI2 1034 aa11.76□□□□□ -0.53
TTC39B-207ENST00000507993 ABCC9O60706 1549 aa11.7□□□□□ -0.54
TTC39B-207ENST00000507993 HOXD11P31277 338 aaPredicted RBP11.67□□□□□ -0.54
TTC39B-207ENST00000507993 RNF216Q9NWF9 866 aaPredicted RBP11.61□□□□□ -0.55
TTC39B-207ENST00000507993 PRKCSHP14314 528 aaPredicted RBP11.58□□□□□ -0.56
TTC39B-207ENST00000507993 MYT1Q01538 1121 aa11.56□□□□□ -0.56
TTC39B-207ENST00000507993 NPM3O75607 178 aaKnown RBP11.54□□□□□ -0.56
TTC39B-207ENST00000507993 ZBTB22O15209 634 aa11.52□□□□□ -0.56
TTC39B-207ENST00000507993 DAXXQ9UER7 740 aaPredicted RBP11.52□□□□□ -0.56
TTC39B-207ENST00000507993 DCAF8L1A6NGE4 600 aa11.52□□□□□ -0.57
TTC39B-207ENST00000507993 PELP1Q8IZL8 1130 aaKnown RBP11.49□□□□□ -0.57
TTC39B-207ENST00000507993 CCDC180Q9P1Z9 1646 aa11.43□□□□□ -0.58
TTC39B-207ENST00000507993 TTBK1Q5TCY1 1321 aaPredicted RBP11.34□□□□□ -0.59
TTC39B-207ENST00000507993 RNF39Q9H2S5 420 aa11.34□□□□□ -0.59
TTC39B-207ENST00000507993 TAOK2Q9UL54 1235 aa11.29□□□□□ -0.6
TTC39B-207ENST00000507993 BCANQ96GW7 911 aa11.24□□□□□ -0.61
TTC39B-207ENST00000507993 PLCB2Q00722 1185 aa11.19□□□□□ -0.62
TTC39B-207ENST00000507993 C1QBPQ07021 282 aaKnown RBP11.19□□□□□ -0.62
TTC39B-207ENST00000507993 DNAJC5BQ9UF47 199 aa11.17□□□□□ -0.62
TTC39B-207ENST00000507993 TIMELESSQ9UNS1 1208 aa11.17□□□□□ -0.62
TTC39B-207ENST00000507993 ARXQ96QS3 562 aa11.14□□□□□ -0.63
TTC39B-207ENST00000507993 FKBP8Q14318 412 aa11.13□□□□□ -0.63
TTC39B-207ENST00000507993 TPRNQ4KMQ1 711 aa11.12□□□□□ -0.63
TTC39B-207ENST00000507993 HAP1P54257 671 aaPredicted RBP11.1□□□□□ -0.63
TTC39B-207ENST00000507993 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.08□□□□□ -0.649e-8■□□□□ 10.2
TTC39B-207ENST00000507993 TULP1O00294 542 aaPredicted RBP11.06□□□□□ -0.64
TTC39B-207ENST00000507993 POTEHQ6S545 545 aa11.02□□□□□ -0.65
TTC39B-207ENST00000507993 SLC4A2P04920 1241 aa11.01□□□□□ -0.65
TTC39B-207ENST00000507993 DCAF8L2P0C7V8 631 aa11.01□□□□□ -0.65
TTC39B-207ENST00000507993 FOXD4L1Q9NU39 408 aa10.99□□□□□ -0.65
TTC39B-207ENST00000507993 RB1CC1Q8TDY2 1594 aa10.96□□□□□ -0.66
TTC39B-207ENST00000507993 U3KPZ7 1027 aaPredicted RBP10.96□□□□□ -0.66
TTC39B-207ENST00000507993 PABPN1Q86U42 306 aaKnown RBP eCLIP10.95□□□□□ -0.66
TTC39B-207ENST00000507993 NACADO15069 1562 aa10.85□□□□□ -0.67
TTC39B-207ENST00000507993 VSIG10Q8N0Z9 540 aa10.85□□□□□ -0.67
TTC39B-207ENST00000507993 HOMEZQ8IX15 550 aa10.83□□□□□ -0.68
TTC39B-207ENST00000507993 ERICH6Q7L0X2 663 aa10.83□□□□□ -0.68
TTC39B-207ENST00000507993 APLP2Q06481 763 aa10.82□□□□□ -0.68
TTC39B-207ENST00000507993 HRCP23327 699 aa10.81□□□□□ -0.68
TTC39B-207ENST00000507993 GTF3C3Q9Y5Q9 886 aa10.81□□□□□ -0.68
TTC39B-207ENST00000507993 UNC13AQ9UPW8 1703 aa10.78□□□□□ -0.68
TTC39B-207ENST00000507993 SPINK5Q9NQ38 1064 aaPredicted RBP10.77□□□□□ -0.69
TTC39B-207ENST00000507993 BICRAQ9NZM4 1560 aa10.73□□□□□ -0.69
TTC39B-207ENST00000507993 KDM2AQ9Y2K7 1162 aa10.72□□□□□ -0.69
TTC39B-207ENST00000507993 CAPN15O75808 1086 aa10.65□□□□□ -0.71
TTC39B-207ENST00000507993 RANGAP1P46060 587 aaPredicted RBP10.65□□□□□ -0.71
TTC39B-207ENST00000507993 FBLN2P98095 1184 aa10.65□□□□□ -0.71
TTC39B-207ENST00000507993 MYO15BQ96JP2 1530 aa10.63□□□□□ -0.71
TTC39B-207ENST00000507993 MYCNP04198 464 aaPredicted RBP10.59□□□□□ -0.71
TTC39B-207ENST00000507993 DSG3P32926 999 aa10.59□□□□□ -0.71
TTC39B-207ENST00000507993 ZCCHC6Q5VYS8 1495 aaKnown RBP10.59□□□□□ -0.71
TTC39B-207ENST00000507993 TMEM132AQ24JP5 1023 aa10.57□□□□□ -0.72
TTC39B-207ENST00000507993 SCRIBQ14160 1630 aa10.56□□□□□ -0.72
TTC39B-207ENST00000507993 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.56□□□□□ -0.72
TTC39B-207ENST00000507993 HNRNPUL2Q1KMD3 747 aaKnown RBP10.56□□□□□ -0.72
TTC39B-207ENST00000507993 TRHP20396 242 aaPredicted RBP10.55□□□□□ -0.72
TTC39B-207ENST00000507993 SAMD1Q6SPF0 538 aaPredicted RBP10.54□□□□□ -0.72
TTC39B-207ENST00000507993 PODXL2Q9NZ53 605 aa10.54□□□□□ -0.72
TTC39B-207ENST00000507993 CC2D2AQ9P2K1 1620 aa10.51□□□□□ -0.73
TTC39B-207ENST00000507993 C14orf37Q86TY3 774 aa10.5□□□□□ -0.73
TTC39B-207ENST00000507993 CECR2Q9BXF3 1484 aa10.49□□□□□ -0.73
TTC39B-207ENST00000507993 DCAF1Q9Y4B6 1507 aa10.48□□□□□ -0.73
TTC39B-207ENST00000507993 ABCB7O75027 752 aa10.48□□□□□ -0.73
TTC39B-207ENST00000507993 ATF5Q9Y2D1 282 aaPredicted RBP10.48□□□□□ -0.73
TTC39B-207ENST00000507993 ZNF219Q9P2Y4 722 aaPredicted RBP10.47□□□□□ -0.73
TTC39B-207ENST00000507993 EIF4G1Q04637 1599 aaKnown RBP10.45□□□□□ -0.74
TTC39B-207ENST00000507993 ATXN8OSP0DMR3 200 aa10.39□□□□□ -0.75
TTC39B-207ENST00000507993 PAXIP1Q6ZW49 1069 aaPredicted RBP10.39□□□□□ -0.75
TTC39B-207ENST00000507993 SHROOM4Q9ULL8 1493 aa10.39□□□□□ -0.75
TTC39B-207ENST00000507993 KLHL34Q8N239 644 aa10.37□□□□□ -0.75
TTC39B-207ENST00000507993 CFAP44Q96MT7 982 aa10.37□□□□□ -0.75
TTC39B-207ENST00000507993 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.36□□□□□ -0.75
TTC39B-207ENST00000507993 PPARGC1BQ86YN6 1023 aaKnown RBP10.34□□□□□ -0.75
TTC39B-207ENST00000507993 POLA2Q14181 598 aa10.32□□□□□ -0.76
TTC39B-207ENST00000507993 PKD2Q13563 968 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms