RNA–Protein interactions for RNA: ENST00000504676.5

CSNK1A1-204, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 2 BASIC

Gene CSNK1A1, Length 1,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-204ENST00000504676 NBR1Q14596 966 aa11.06□□□□□ -0.64
CSNK1A1-204ENST00000504676 BBXQ8WY36 941 aaPredicted RBP11.05□□□□□ -0.64
CSNK1A1-204ENST00000504676 WIZO95785 1651 aa11.05□□□□□ -0.64
CSNK1A1-204ENST00000504676 ABCB7O75027 752 aa11.05□□□□□ -0.64
CSNK1A1-204ENST00000504676 ATXN8OSP0DMR3 200 aa11.05□□□□□ -0.64
CSNK1A1-204ENST00000504676 TSHZ2Q9NRE2 1034 aa11.04□□□□□ -0.64
CSNK1A1-204ENST00000504676 PKD2Q13563 968 aa11.03□□□□□ -0.64
CSNK1A1-204ENST00000504676 UBTFP17480 764 aaKnown RBP11.03□□□□□ -0.64
CSNK1A1-204ENST00000504676 TOP2AP11388 1531 aaKnown RBP11.02□□□□□ -0.65
CSNK1A1-204ENST00000504676 EIF4G1Q04637 1599 aaKnown RBP11□□□□□ -0.65
CSNK1A1-204ENST00000504676 NPM1P06748 294 aaKnown RBP eCLIP10.99□□□□□ -0.65
CSNK1A1-204ENST00000504676 ATF5Q9Y2D1 282 aaPredicted RBP10.98□□□□□ -0.65
CSNK1A1-204ENST00000504676 SMARCA4P51532 1647 aa10.98□□□□□ -0.65
CSNK1A1-204ENST00000504676 EEA1Q15075 1411 aa10.93□□□□□ -0.66
CSNK1A1-204ENST00000504676 CCDC88BA6NC98 1476 aa10.92□□□□□ -0.66
CSNK1A1-204ENST00000504676 POLA2Q14181 598 aa10.91□□□□□ -0.66
CSNK1A1-204ENST00000504676 FAM9AQ8IZU1 332 aaPredicted RBP10.9□□□□□ -0.66
CSNK1A1-204ENST00000504676 SMARCA2P51531 1590 aa10.9□□□□□ -0.66
CSNK1A1-204ENST00000504676 PPARGC1BQ86YN6 1023 aaKnown RBP10.9□□□□□ -0.67
CSNK1A1-204ENST00000504676 PEG3Q9GZU2 1588 aa10.89□□□□□ -0.67
CSNK1A1-204ENST00000504676 DNAJC5Q9H3Z4 198 aa10.88□□□□□ -0.67
CSNK1A1-204ENST00000504676 UNC13AQ9UPW8 1703 aa10.87□□□□□ -0.67
CSNK1A1-204ENST00000504676 WRNQ14191 1432 aaPredicted RBP eCLIP10.87□□□□□ -0.67
CSNK1A1-204ENST00000504676 IFNLR1Q8IU57 520 aaPredicted RBP10.85□□□□□ -0.67
CSNK1A1-204ENST00000504676 SPRYD3Q8NCJ5 442 aa10.84□□□□□ -0.67
CSNK1A1-204ENST00000504676 VASPP50552 380 aaPredicted RBP10.82□□□□□ -0.68
CSNK1A1-204ENST00000504676 TNIKQ9UKE5 1360 aa10.82□□□□□ -0.68
CSNK1A1-204ENST00000504676 BICRAQ9NZM4 1560 aa10.81□□□□□ -0.68
CSNK1A1-204ENST00000504676 EIF5BO60841 1220 aaKnown RBP10.78□□□□□ -0.68
CSNK1A1-204ENST00000504676 ABCC8Q09428 1581 aa10.76□□□□□ -0.69
CSNK1A1-204ENST00000504676 CEP162Q5TB80 1403 aa10.73□□□□□ -0.69
CSNK1A1-204ENST00000504676 GOLGA3Q08378 1498 aa10.72□□□□□ -0.69
CSNK1A1-204ENST00000504676 SOGA1O94964 1423 aa10.71□□□□□ -0.69
CSNK1A1-204ENST00000504676 ATAD2BQ9ULI0 1458 aa10.71□□□□□ -0.69
CSNK1A1-204ENST00000504676 ZBTB12Q9Y330 459 aaPredicted RBP10.7□□□□□ -0.7
CSNK1A1-204ENST00000504676 CEP164Q9UPV0 1460 aa10.67□□□□□ -0.7
CSNK1A1-204ENST00000504676 KIF21BO75037 1637 aa10.67□□□□□ -0.7
CSNK1A1-204ENST00000504676 BAZ1BQ9UIG0 1483 aaKnown RBP10.66□□□□□ -0.7
CSNK1A1-204ENST00000504676 PABPN1Q86U42 306 aaKnown RBP eCLIP10.65□□□□□ -0.7
CSNK1A1-204ENST00000504676 BRPF1P55201 1214 aaPredicted RBP10.65□□□□□ -0.71
CSNK1A1-204ENST00000504676 RBM42Q9BTD8 480 aaKnown RBP10.65□□□□□ -0.71
CSNK1A1-204ENST00000504676 ECM2O94769 699 aaPredicted RBP10.63□□□□□ -0.71
CSNK1A1-204ENST00000504676 CCER1Q8TC90 406 aaPredicted RBP10.62□□□□□ -0.71
CSNK1A1-204ENST00000504676 RUSC2Q8N2Y8 1516 aa10.61□□□□□ -0.71
CSNK1A1-204ENST00000504676 SYNJ1O43426 1573 aa10.6□□□□□ -0.71
CSNK1A1-204ENST00000504676 CCDC9Q9Y3X0 531 aaKnown RBP10.59□□□□□ -0.71
CSNK1A1-204ENST00000504676 NCAPD3P42695 1498 aa10.58□□□□□ -0.72
CSNK1A1-204ENST00000504676 HMGXB3Q12766 1538 aa10.58□□□□□ -0.72
CSNK1A1-204ENST00000504676 TOP2BQ02880 1626 aa10.57□□□□□ -0.72
CSNK1A1-204ENST00000504676 RGL2O15211 777 aa10.57□□□□□ -0.72
CSNK1A1-204ENST00000504676 CLIP1P30622 1438 aa10.55□□□□□ -0.72
CSNK1A1-204ENST00000504676 VPS8Q8N3P4 1428 aa10.55□□□□□ -0.72
CSNK1A1-204ENST00000504676 BIVM-ERCC5R4GMW8 1640 aa10.54□□□□□ -0.72
CSNK1A1-204ENST00000504676 OSCARQ8IYS5 282 aa10.54□□□□□ -0.72
CSNK1A1-204ENST00000504676 ERICH3Q5RHP9 1530 aa10.53□□□□□ -0.72
CSNK1A1-204ENST00000504676 PROM2Q8N271 834 aa10.53□□□□□ -0.72
CSNK1A1-204ENST00000504676 ARID3AQ99856 593 aa10.49□□□□□ -0.73
CSNK1A1-204ENST00000504676 PRXQ9BXM0 1461 aa10.49□□□□□ -0.73
CSNK1A1-204ENST00000504676 SPDYE4A6NLX3 237 aa10.48□□□□□ -0.73
CSNK1A1-204ENST00000504676 MKRN4PQ13434 485 aaPredicted RBP10.48□□□□□ -0.73
CSNK1A1-204ENST00000504676 RAPGEF2Q9Y4G8 1499 aa10.47□□□□□ -0.73
CSNK1A1-204ENST00000504676 ZMYND15Q9H091 742 aa10.47□□□□□ -0.73
CSNK1A1-204ENST00000504676 CLSPNQ9HAW4 1339 aa10.46□□□□□ -0.73
CSNK1A1-204ENST00000504676 CFTRP13569 1480 aa10.46□□□□□ -0.73
CSNK1A1-204ENST00000504676 CHGAP10645 457 aaKnown RBP10.46□□□□□ -0.74
CSNK1A1-204ENST00000504676 AKT1S1Q96B36 256 aa10.46□□□□□ -0.74
CSNK1A1-204ENST00000504676 ZBTB7CA1YPR0 619 aa10.45□□□□□ -0.74
CSNK1A1-204ENST00000504676 DIEXFQ68CQ4 756 aaKnown RBP10.45□□□□□ -0.74
CSNK1A1-204ENST00000504676 RSPH6AQ9H0K4 717 aa10.45□□□□□ -0.74
CSNK1A1-204ENST00000504676 IGSF3O75054 1194 aa10.44□□□□□ -0.74
CSNK1A1-204ENST00000504676 KIF27Q86VH2 1401 aa10.44□□□□□ -0.74
CSNK1A1-204ENST00000504676 NECTIN2Q92692 538 aa10.44□□□□□ -0.74
CSNK1A1-204ENST00000504676 ZNF316A6NFI3 1004 aaPredicted RBP10.43□□□□□ -0.74
CSNK1A1-204ENST00000504676 C1orf115Q9H7X2 142 aa10.42□□□□□ -0.74
CSNK1A1-204ENST00000504676 CENPBP07199 599 aaPredicted RBP10.42□□□□□ -0.74
CSNK1A1-204ENST00000504676 NEUROD2Q15784 382 aa10.42□□□□□ -0.74
CSNK1A1-204ENST00000504676 ACIN1Q9UKV3 1341 aaKnown RBP10.4□□□□□ -0.74
CSNK1A1-204ENST00000504676 CUX1P39880 1505 aa10.4□□□□□ -0.75
CSNK1A1-204ENST00000504676 SPDYE2BA6NHP3 402 aa10.39□□□□□ -0.75
CSNK1A1-204ENST00000504676 SPDYE6P0CI01 402 aa10.39□□□□□ -0.75
CSNK1A1-204ENST00000504676 SPDYE2Q495Y8 402 aa10.39□□□□□ -0.75
CSNK1A1-204ENST00000504676 LMOD2Q6P5Q4 547 aa10.37□□□□□ -0.75
CSNK1A1-204ENST00000504676 SPOCK2Q92563 424 aa10.37□□□□□ -0.75
CSNK1A1-204ENST00000504676 PDIA4P13667 645 aaKnown RBP10.37□□□□□ -0.75
CSNK1A1-204ENST00000504676 PRDM2Q13029 1718 aa10.36□□□□□ -0.75
CSNK1A1-204ENST00000504676 PLEKHG5O94827 1062 aa10.36□□□□□ -0.75
CSNK1A1-204ENST00000504676 REM2Q8IYK8 340 aaPredicted RBP10.36□□□□□ -0.75
CSNK1A1-204ENST00000504676 ARAP1Q96P48 1450 aa10.36□□□□□ -0.75
CSNK1A1-204ENST00000504676 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.35□□□□□ -0.75
CSNK1A1-204ENST00000504676 MAP3K1Q13233 1512 aa10.35□□□□□ -0.75
CSNK1A1-204ENST00000504676 RRBP1Q9P2E9 1410 aaKnown RBP10.34□□□□□ -0.75
CSNK1A1-204ENST00000504676 CADPSQ9ULU8 1353 aa10.33□□□□□ -0.76
CSNK1A1-204ENST00000504676 CHRDL2Q6WN34 429 aa10.33□□□□□ -0.76
CSNK1A1-204ENST00000504676 CUX2O14529 1486 aa10.33□□□□□ -0.76
CSNK1A1-204ENST00000504676 ZNF692Q9BU19 519 aaPredicted RBP10.31□□□□□ -0.76
CSNK1A1-204ENST00000504676 CDK11BP21127 795 aaKnown RBP10.3□□□□□ -0.76
CSNK1A1-204ENST00000504676 CDK11AQ9UQ88 783 aaPredicted RBP10.3□□□□□ -0.76
CSNK1A1-204ENST00000504676 IGF1RP08069 1367 aa10.3□□□□□ -0.76
CSNK1A1-204ENST00000504676 NEUROD1Q13562 356 aa10.28□□□□□ -0.76
CSNK1A1-204ENST00000504676 ARHGAP35Q9NRY4 1499 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms