RNA–Protein interactions for RNA: ENST00000504246.5

LINC00461-203, long intergenic non-protein coding RNA 461, humanhuman

TSL 2 BASIC

Gene LINC00461, Length 2,300 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00461-203ENST00000504246 ITGAEP38570 1179 aa26.89■■□□□ 1.89
LINC00461-203ENST00000504246 CFAP43Q8NDM7 1665 aa26.87■■□□□ 1.89
LINC00461-203ENST00000504246 ABCA10Q8WWZ4 1543 aa26.84■■□□□ 1.89
LINC00461-203ENST00000504246 SETD5Q9C0A6 1442 aa26.82■■□□□ 1.88
LINC00461-203ENST00000504246 MAPKBP1O60336 1514 aa26.82■■□□□ 1.88
LINC00461-203ENST00000504246 PCF11O94913 1555 aaKnown RBP26.81■■□□□ 1.88
LINC00461-203ENST00000504246 TOPBP1Q92547 1522 aa26.81■■□□□ 1.88
LINC00461-203ENST00000504246 PHLDB1Q86UU1 1377 aa26.8■■□□□ 1.88
LINC00461-203ENST00000504246 POLA1P09884 1462 aaPredicted RBP26.78■■□□□ 1.88
LINC00461-203ENST00000504246 RAD54L2Q9Y4B4 1467 aa26.77■■□□□ 1.88
LINC00461-203ENST00000504246 EFCAB5A4FU69 1503 aa26.77■■□□□ 1.88
LINC00461-203ENST00000504246 CUL7Q14999 1698 aa26.76■■□□□ 1.87
LINC00461-203ENST00000504246 FYCO1Q9BQS8 1478 aa26.74■■□□□ 1.87
LINC00461-203ENST00000504246 NESP48681 1621 aa26.71■■□□□ 1.87
LINC00461-203ENST00000504246 AQRO60306 1485 aaKnown RBP eCLIP26.71■■□□□ 1.87
LINC00461-203ENST00000504246 CTTNBP2Q8WZ74 1663 aa26.69■■□□□ 1.86
LINC00461-203ENST00000504246 FAM50AQ14320 339 aaKnown RBP26.68■■□□□ 1.86
LINC00461-203ENST00000504246 CASKIN1Q8WXD9 1431 aa26.68■■□□□ 1.86
LINC00461-203ENST00000504246 FHOD3Q2V2M9 1422 aa26.68■■□□□ 1.86
LINC00461-203ENST00000504246 P3H3Q8IVL6 736 aa26.66■■□□□ 1.86
LINC00461-203ENST00000504246 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.66■■□□□ 1.86
LINC00461-203ENST00000504246 LAMC3Q9Y6N6 1575 aa26.65■■□□□ 1.86
LINC00461-203ENST00000504246 WDR97A6NE52 1622 aa26.65■■□□□ 1.86
LINC00461-203ENST00000504246 ATP1B4Q9UN42 357 aaPredicted RBP26.61■■□□□ 1.85
LINC00461-203ENST00000504246 TIMELESSQ9UNS1 1208 aa26.6■■□□□ 1.85
LINC00461-203ENST00000504246 FMN1Q68DA7 1419 aa26.58■■□□□ 1.85
LINC00461-203ENST00000504246 URB2Q14146 1524 aaKnown RBP26.58■■□□□ 1.85
LINC00461-203ENST00000504246 ABCA5Q8WWZ7 1642 aa26.53■■□□□ 1.84
LINC00461-203ENST00000504246 SIN3AQ96ST3 1273 aa26.5■■□□□ 1.83
LINC00461-203ENST00000504246 SNAPC4Q5SXM2 1469 aa26.49■■□□□ 1.83
LINC00461-203ENST00000504246 MYT1Q01538 1121 aa26.49■■□□□ 1.83
LINC00461-203ENST00000504246 FGD6Q6ZV73 1430 aa26.49■■□□□ 1.83
LINC00461-203ENST00000504246 SUPT16HQ9Y5B9 1047 aaKnown RBP26.46■■□□□ 1.83
LINC00461-203ENST00000504246 SAMD9Q5K651 1589 aa26.46■■□□□ 1.83
LINC00461-203ENST00000504246 GAPVD1Q14C86 1478 aa26.43■■□□□ 1.82
LINC00461-203ENST00000504246 PDS5BQ9NTI5 1447 aa26.43■■□□□ 1.82
LINC00461-203ENST00000504246 MTUS2Q5JR59 1369 aa26.42■■□□□ 1.82
LINC00461-203ENST00000504246 TDRD9Q8NDG6 1382 aaKnown RBP26.4■■□□□ 1.82
LINC00461-203ENST00000504246 THOC2Q8NI27 1593 aaKnown RBP26.4■■□□□ 1.82
LINC00461-203ENST00000504246 PPP1R15AO75807 674 aaPredicted RBP26.37■■□□□ 1.81
LINC00461-203ENST00000504246 CCDC18Q5T9S5 1454 aa26.37■■□□□ 1.81
LINC00461-203ENST00000504246 HFM1A2PYH4 1435 aa26.36■■□□□ 1.81
LINC00461-203ENST00000504246 DDX10Q13206 875 aaKnown RBP26.35■■□□□ 1.81
LINC00461-203ENST00000504246 KIF21AQ7Z4S6 1674 aa26.35■■□□□ 1.81
LINC00461-203ENST00000504246 GRIN2BQ13224 1484 aa26.35■■□□□ 1.81
LINC00461-203ENST00000504246 LRRIQ1Q96JM4 1722 aa26.33■■□□□ 1.81
LINC00461-203ENST00000504246 UACAQ9BZF9 1416 aa26.32■■□□□ 1.8
LINC00461-203ENST00000504246 PTPN23Q9H3S7 1636 aa26.32■■□□□ 1.8
LINC00461-203ENST00000504246 MYOM3Q5VTT5 1437 aa26.31■■□□□ 1.8
LINC00461-203ENST00000504246 NCOA2Q15596 1464 aa26.31■■□□□ 1.8
LINC00461-203ENST00000504246 KCNH8Q96L42 1107 aa26.31■■□□□ 1.8
LINC00461-203ENST00000504246 EHBP1L1Q8N3D4 1523 aa26.31■■□□□ 1.8
LINC00461-203ENST00000504246 SUPT6HQ7KZ85 1726 aaKnown RBP26.3■■□□□ 1.8
LINC00461-203ENST00000504246 TARBP1Q13395 1621 aaKnown RBP26.29■■□□□ 1.8
LINC00461-203ENST00000504246 TONSLQ96HA7 1378 aa26.29■■□□□ 1.8
LINC00461-203ENST00000504246 PTPRKQ15262 1439 aa26.28■■□□□ 1.8
LINC00461-203ENST00000504246 NAIPQ13075 1403 aa26.24■■□□□ 1.79
LINC00461-203ENST00000504246 CCER2I3L3R5 266 aa26.21■■□□□ 1.79
LINC00461-203ENST00000504246 UGGT2Q9NYU1 1516 aa26.21■■□□□ 1.79
LINC00461-203ENST00000504246 PBRM1Q86U86 1689 aa26.2■■□□□ 1.79
LINC00461-203ENST00000504246 ARHGEF11O15085 1522 aa26.19■■□□□ 1.78
LINC00461-203ENST00000504246 ANP32CO43423 234 aa26.17■■□□□ 1.78
LINC00461-203ENST00000504246 DNAJC5BQ9UF47 199 aa26.16■■□□□ 1.78
LINC00461-203ENST00000504246 HIRIP3Q9BW71 556 aaPredicted RBP26.14■■□□□ 1.78
LINC00461-203ENST00000504246 HECW1Q76N89 1606 aa26.13■■□□□ 1.77
LINC00461-203ENST00000504246 TCOF1Q13428 1488 aaKnown RBP26.12■■□□□ 1.77
LINC00461-203ENST00000504246 ADAMTS12P58397 1594 aa26.11■■□□□ 1.77
LINC00461-203ENST00000504246 MAGI3Q5TCQ9 1506 aa26.11■■□□□ 1.77
LINC00461-203ENST00000504246 IQGAP2Q13576 1575 aa26.11■■□□□ 1.77
LINC00461-203ENST00000504246 GCC2Q8IWJ2 1684 aa26.08■■□□□ 1.77
LINC00461-203ENST00000504246 AKNAQ7Z591 1439 aa26.08■■□□□ 1.77
LINC00461-203ENST00000504246 MRC2Q9UBG0 1479 aa26.05■■□□□ 1.76
LINC00461-203ENST00000504246 KDM5BQ9UGL1 1544 aa26.05■■□□□ 1.76
LINC00461-203ENST00000504246 EPRSP07814 1512 aaKnown RBP26.03■■□□□ 1.76
LINC00461-203ENST00000504246 TSHZ2Q9NRE2 1034 aa26.02■■□□□ 1.76
LINC00461-203ENST00000504246 MIA2Q96PC5 1412 aa26.01■■□□□ 1.76
LINC00461-203ENST00000504246 FKBP8Q14318 412 aa25.98■■□□□ 1.75
LINC00461-203ENST00000504246 WDR62O43379 1518 aa25.98■■□□□ 1.75
LINC00461-203ENST00000504246 RRP7BPQ9NSQ0 103 aa25.98■■□□□ 1.75
LINC00461-203ENST00000504246 NEFLP07196 543 aa25.96■■□□□ 1.75
LINC00461-203ENST00000504246 CHIC2Q9UKJ5 165 aa25.93■■□□□ 1.74
LINC00461-203ENST00000504246 CDK13Q14004 1512 aaKnown RBP25.93■■□□□ 1.74
LINC00461-203ENST00000504246 DENND4BO75064 1496 aaPredicted RBP25.92■■□□□ 1.74
LINC00461-203ENST00000504246 TRIM52Q96A61 297 aa25.92■■□□□ 1.74
LINC00461-203ENST00000504246 IFT140Q96RY7 1462 aa25.91■■□□□ 1.74
LINC00461-203ENST00000504246 BCANQ96GW7 911 aa25.89■■□□□ 1.74
LINC00461-203ENST00000504246 KDM6BO15054 1643 aa25.88■■□□□ 1.73
LINC00461-203ENST00000504246 MPHOSPH9Q99550 1183 aa25.85■■□□□ 1.73
LINC00461-203ENST00000504246 HSPA5P11021 654 aaKnown RBP25.83■■□□□ 1.73
LINC00461-203ENST00000504246 KIAA0556O60303 1618 aa25.83■■□□□ 1.73
LINC00461-203ENST00000504246 ROCK1Q13464 1354 aa25.83■■□□□ 1.73
LINC00461-203ENST00000504246 ZNF608Q9ULD9 1512 aaPredicted RBP25.83■■□□□ 1.73
LINC00461-203ENST00000504246 KIAA0586Q9BVV6 1533 aa25.82■■□□□ 1.72
LINC00461-203ENST00000504246 EIF4G2P78344 907 aaKnown RBP eCLIP25.81■■□□□ 1.72
LINC00461-203ENST00000504246 WASHC2AQ641Q2 1341 aa25.81■■□□□ 1.72
LINC00461-203ENST00000504246 DAPK1P53355 1430 aa25.79■■□□□ 1.72
LINC00461-203ENST00000504246 DISP1Q96F81 1524 aa25.79■■□□□ 1.72
LINC00461-203ENST00000504246 DNMT1P26358 1616 aaKnown RBP25.77■■□□□ 1.72
LINC00461-203ENST00000504246 CNTLNQ9NXG0 1405 aa25.74■■□□□ 1.71
LINC00461-203ENST00000504246 RAPGEF6Q8TEU7 1601 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms