RNA–Protein interactions for RNA: ENST00000503784.1

RFC1-206, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-206ENST00000503784 FGD5Q6ZNL6 1462 aa13.05□□□□□ -0.32
RFC1-206ENST00000503784 CNKSR2Q8WXI2 1034 aa13.05□□□□□ -0.32
RFC1-206ENST00000503784 ERCC6L2Q5T890 1561 aa13.02□□□□□ -0.33
RFC1-206ENST00000503784 WDR97A6NE52 1622 aa13.01□□□□□ -0.33
RFC1-206ENST00000503784 CUX1P39880 1505 aa12.95□□□□□ -0.34
RFC1-206ENST00000503784 KDM4FA0A1W2PPD8 638 aa12.94□□□□□ -0.34
RFC1-206ENST00000503784 PBRM1Q86U86 1689 aa12.93□□□□□ -0.34
RFC1-206ENST00000503784 CEP170Q5SW79 1584 aa12.92□□□□□ -0.34
RFC1-206ENST00000503784 FAM69CQ0P6D2 419 aa12.9□□□□□ -0.34
RFC1-206ENST00000503784 GRIN2AQ12879 1464 aa12.9□□□□□ -0.34
RFC1-206ENST00000503784 KIF13AQ9H1H9 1805 aa12.9□□□□□ -0.34
RFC1-206ENST00000503784 NUP160Q12769 1436 aa12.86□□□□□ -0.35
RFC1-206ENST00000503784 ABCA5Q8WWZ7 1642 aa12.85□□□□□ -0.35
RFC1-206ENST00000503784 ABCC10Q5T3U5 1492 aa12.84□□□□□ -0.35
RFC1-206ENST00000503784 ABCA10Q8WWZ4 1543 aa12.83□□□□□ -0.35
RFC1-206ENST00000503784 ADAMTS12P58397 1594 aa12.82□□□□□ -0.36
RFC1-206ENST00000503784 KDM6BO15054 1643 aa12.82□□□□□ -0.36
RFC1-206ENST00000503784 PRG4Q92954 1404 aaPredicted RBP12.81□□□□□ -0.36
RFC1-206ENST00000503784 SHROOM2Q13796 1616 aa12.8□□□□□ -0.36
RFC1-206ENST00000503784 DIP2BQ9P265 1576 aa12.79□□□□□ -0.36
RFC1-206ENST00000503784 NPM1P06748 294 aaKnown RBP eCLIP12.79□□□□□ -0.36
RFC1-206ENST00000503784 FHAD1B1AJZ9 1412 aa12.76□□□□□ -0.37
RFC1-206ENST00000503784 MAPKBP1O60336 1514 aa12.75□□□□□ -0.37
RFC1-206ENST00000503784 ADGRL1O94910 1474 aa12.73□□□□□ -0.37
RFC1-206ENST00000503784 JPH4Q96JJ6 628 aa12.73□□□□□ -0.37
RFC1-206ENST00000503784 HECW2Q9P2P5 1572 aa12.71□□□□□ -0.37
RFC1-206ENST00000503784 WRNQ14191 1432 aaPredicted RBP eCLIP12.71□□□□□ -0.38
RFC1-206ENST00000503784 ADCY10Q96PN6 1610 aa12.7□□□□□ -0.38
RFC1-206ENST00000503784 TSPOAP1O95153 1857 aa12.7□□□□□ -0.38
RFC1-206ENST00000503784 POTEHQ6S545 545 aa12.66□□□□□ -0.38
RFC1-206ENST00000503784 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.65□□□□□ -0.381e-7■■■■□ 19.9
RFC1-206ENST00000503784 RUSC2Q8N2Y8 1516 aa12.65□□□□□ -0.38
RFC1-206ENST00000503784 ERICH3Q5RHP9 1530 aa12.64□□□□□ -0.39
RFC1-206ENST00000503784 TTBK1Q5TCY1 1321 aaPredicted RBP12.63□□□□□ -0.39
RFC1-206ENST00000503784 FBXO41Q8TF61 875 aa12.6□□□□□ -0.39
RFC1-206ENST00000503784 COL17A1Q9UMD9 1497 aaPredicted RBP12.56□□□□□ -0.4
RFC1-206ENST00000503784 TOP2BQ02880 1626 aa12.55□□□□□ -0.4
RFC1-206ENST00000503784 ASXL2Q76L83 1435 aa12.55□□□□□ -0.4
RFC1-206ENST00000503784 BIVM-ERCC5R4GMW8 1640 aa12.54□□□□□ -0.4
RFC1-206ENST00000503784 PPRC1Q5VV67 1664 aaKnown RBP12.54□□□□□ -0.4
RFC1-206ENST00000503784 PTPRGP23470 1445 aa12.53□□□□□ -0.4
RFC1-206ENST00000503784 ABCC2Q92887 1545 aa12.52□□□□□ -0.41
RFC1-206ENST00000503784 KIAA0586Q9BVV6 1533 aa12.52□□□□□ -0.41
RFC1-206ENST00000503784 PLB1Q6P1J6 1458 aa12.51□□□□□ -0.41
RFC1-206ENST00000503784 GLI2P10070 1586 aa12.49□□□□□ -0.41
RFC1-206ENST00000503784 NCBP3Q53F19 620 aaKnown RBP12.48□□□□□ -0.41
RFC1-206ENST00000503784 LMTK3Q96Q04 1460 aa12.46□□□□□ -0.41
RFC1-206ENST00000503784 TEX14Q8IWB6 1497 aa12.46□□□□□ -0.42
RFC1-206ENST00000503784 TNIKQ9UKE5 1360 aa12.45□□□□□ -0.42
RFC1-206ENST00000503784 EPRSP07814 1512 aaKnown RBP12.45□□□□□ -0.42
RFC1-206ENST00000503784 CUL7Q14999 1698 aa12.43□□□□□ -0.42
RFC1-206ENST00000503784 CARMIL2Q6F5E8 1435 aa12.43□□□□□ -0.42
RFC1-206ENST00000503784 MAP3K4Q9Y6R4 1608 aa12.42□□□□□ -0.42
RFC1-206ENST00000503784 SUPT5HO00267 1087 aaKnown RBP12.41□□□□□ -0.42
RFC1-206ENST00000503784 DSG3P32926 999 aa12.41□□□□□ -0.42
RFC1-206ENST00000503784 UACAQ9BZF9 1416 aa12.41□□□□□ -0.42
RFC1-206ENST00000503784 UHRF1BP1LA0JNW5 1464 aa12.4□□□□□ -0.43
RFC1-206ENST00000503784 IGF1RP08069 1367 aa12.39□□□□□ -0.43
RFC1-206ENST00000503784 U3KPZ7 1027 aaPredicted RBP12.38□□□□□ -0.43
RFC1-206ENST00000503784 KIF21BO75037 1637 aa12.36□□□□□ -0.43
RFC1-206ENST00000503784 KDM5BQ9UGL1 1544 aa12.36□□□□□ -0.43
RFC1-206ENST00000503784 NPM3O75607 178 aaKnown RBP12.35□□□□□ -0.43
RFC1-206ENST00000503784 SPINK5Q9NQ38 1064 aaPredicted RBP12.35□□□□□ -0.43
RFC1-206ENST00000503784 ZCCHC11Q5TAX3 1644 aaKnown RBP12.34□□□□□ -0.43
RFC1-206ENST00000503784 ILDR2Q71H61 639 aa12.34□□□□□ -0.43
RFC1-206ENST00000503784 KIF27Q86VH2 1401 aa12.34□□□□□ -0.43
RFC1-206ENST00000503784 WDR7Q9Y4E6 1490 aa12.34□□□□□ -0.43
RFC1-206ENST00000503784 IQGAP2Q13576 1575 aa12.33□□□□□ -0.44
RFC1-206ENST00000503784 PTPRMP28827 1452 aa12.33□□□□□ -0.44
RFC1-206ENST00000503784 DISP1Q96F81 1524 aa12.32□□□□□ -0.44
RFC1-206ENST00000503784 DISP3Q9P2K9 1392 aa12.32□□□□□ -0.44
RFC1-206ENST00000503784 CD109Q6YHK3 1445 aa12.32□□□□□ -0.44
RFC1-206ENST00000503784 CARMIL1Q5VZK9 1371 aa12.31□□□□□ -0.44
RFC1-206ENST00000503784 CAPN15O75808 1086 aa12.31□□□□□ -0.44
RFC1-206ENST00000503784 KCNH8Q96L42 1107 aa12.31□□□□□ -0.44
RFC1-206ENST00000503784 SOCS7O14512 581 aa12.3□□□□□ -0.44
RFC1-206ENST00000503784 MAGI3Q5TCQ9 1506 aa12.29□□□□□ -0.44
RFC1-206ENST00000503784 PCF11O94913 1555 aaKnown RBP12.29□□□□□ -0.44
RFC1-206ENST00000503784 HSPA2P54652 639 aa12.26□□□□□ -0.45
RFC1-206ENST00000503784 ARID4BQ4LE39 1312 aaPredicted RBP12.24□□□□□ -0.45
RFC1-206ENST00000503784 CERKQ8TCT0 537 aa12.24□□□□□ -0.45
RFC1-206ENST00000503784 ADAMTSL3P82987 1691 aa12.23□□□□□ -0.45
RFC1-206ENST00000503784 KIAA0556O60303 1618 aa12.23□□□□□ -0.45
RFC1-206ENST00000503784 CFAP43Q8NDM7 1665 aa12.22□□□□□ -0.45
RFC1-206ENST00000503784 UGGT2Q9NYU1 1516 aa12.21□□□□□ -0.45
RFC1-206ENST00000503784 MADDQ8WXG6 1647 aa12.21□□□□□ -0.46
RFC1-206ENST00000503784 ARID3CA6NKF2 412 aa12.2□□□□□ -0.46
RFC1-206ENST00000503784 RAPGEF3O95398 923 aa12.2□□□□□ -0.46
RFC1-206ENST00000503784 ARAP3Q8WWN8 1544 aa12.2□□□□□ -0.46
RFC1-206ENST00000503784 BCORL1Q5H9F3 1711 aa12.17□□□□□ -0.46
RFC1-206ENST00000503784 SPATA31D1Q6ZQQ2 1576 aa12.15□□□□□ -0.46
RFC1-206ENST00000503784 RIMS1Q86UR5 1692 aaKnown RBP12.14□□□□□ -0.47
RFC1-206ENST00000503784 RAPGEF2Q9Y4G8 1499 aa12.14□□□□□ -0.47
RFC1-206ENST00000503784 ABCA8O94911 1581 aa12.13□□□□□ -0.47
RFC1-206ENST00000503784 FRMPD1Q5SYB0 1578 aa12.11□□□□□ -0.47
RFC1-206ENST00000503784 PHLDB1Q86UU1 1377 aa12.09□□□□□ -0.47
RFC1-206ENST00000503784 GOLGA3Q08378 1498 aa12.08□□□□□ -0.47
RFC1-206ENST00000503784 ARHGEF40Q8TER5 1519 aa12.08□□□□□ -0.48
RFC1-206ENST00000503784 MLECQ14165 292 aa12.07□□□□□ -0.48
RFC1-206ENST00000503784 NEO1Q92859 1461 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms