RNA–Protein interactions for RNA: ENST00000503114.1

TRIM41-203, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 1,904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-203ENST00000503114 ACIN1Q9UKV3 1341 aaKnown RBP28.24■■■□□ 2.11
TRIM41-203ENST00000503114 CTTNBP2Q8WZ74 1663 aa28.24■■■□□ 2.11
TRIM41-203ENST00000503114 LRRC9Q6ZRR7 1453 aa28.22■■■□□ 2.11
TRIM41-203ENST00000503114 EFCAB5A4FU69 1503 aa28.21■■■□□ 2.11
TRIM41-203ENST00000503114 PCF11O94913 1555 aaKnown RBP28.21■■■□□ 2.11
TRIM41-203ENST00000503114 URB2Q14146 1524 aaKnown RBP28.18■■■□□ 2.1
TRIM41-203ENST00000503114 NEUROD1Q13562 356 aa28.15■■■□□ 2.1
TRIM41-203ENST00000503114 ABCA5Q8WWZ7 1642 aa28.14■■■□□ 2.09
TRIM41-203ENST00000503114 CENPBP07199 599 aaPredicted RBP28.12■■■□□ 2.09
TRIM41-203ENST00000503114 FYCO1Q9BQS8 1478 aa28.11■■■□□ 2.09
TRIM41-203ENST00000503114 AQRO60306 1485 aaKnown RBP eCLIP28.11■■■□□ 2.095e-7■■■■□ 25.2
TRIM41-203ENST00000503114 PDS5BQ9NTI5 1447 aa28.1■■■□□ 2.09
TRIM41-203ENST00000503114 FHOD3Q2V2M9 1422 aa28.06■■■□□ 2.08
TRIM41-203ENST00000503114 PHLDB1Q86UU1 1377 aa28.05■■■□□ 2.08
TRIM41-203ENST00000503114 CASKIN1Q8WXD9 1431 aa28.05■■■□□ 2.08
TRIM41-203ENST00000503114 KIF21AQ7Z4S6 1674 aa28.01■■■□□ 2.07
TRIM41-203ENST00000503114 RAB3GAP2Q9H2M9 1393 aa27.98■■■□□ 2.07
TRIM41-203ENST00000503114 SAMD9Q5K651 1589 aa27.98■■■□□ 2.07
TRIM41-203ENST00000503114 P3H3Q8IVL6 736 aa27.96■■■□□ 2.07
TRIM41-203ENST00000503114 GAPVD1Q14C86 1478 aa27.96■■■□□ 2.07
TRIM41-203ENST00000503114 MIER1Q8N108 512 aa27.94■■■□□ 2.06
TRIM41-203ENST00000503114 MAPKBP1O60336 1514 aa27.94■■■□□ 2.06
TRIM41-203ENST00000503114 FMN1Q68DA7 1419 aa27.94■■■□□ 2.06
TRIM41-203ENST00000503114 SNAPC4Q5SXM2 1469 aa27.93■■■□□ 2.06
TRIM41-203ENST00000503114 SETD5Q9C0A6 1442 aa27.93■■■□□ 2.06
TRIM41-203ENST00000503114 ITGAEP38570 1179 aa27.92■■■□□ 2.06
TRIM41-203ENST00000503114 TARBP1Q13395 1621 aaKnown RBP27.91■■■□□ 2.06
TRIM41-203ENST00000503114 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.9■■■□□ 2.062e-8■■□□□ 13.2
TRIM41-203ENST00000503114 TDRD9Q8NDG6 1382 aaKnown RBP27.89■■■□□ 2.06
TRIM41-203ENST00000503114 LRRIQ1Q96JM4 1722 aa27.86■■■□□ 2.05
TRIM41-203ENST00000503114 DNAJC5BQ9UF47 199 aa27.84■■■□□ 2.05
TRIM41-203ENST00000503114 THOC2Q8NI27 1593 aaKnown RBP27.83■■■□□ 2.05
TRIM41-203ENST00000503114 GTF3C3Q9Y5Q9 886 aa27.81■■■□□ 2.04
TRIM41-203ENST00000503114 PBRM1Q86U86 1689 aa27.8■■■□□ 2.04
TRIM41-203ENST00000503114 FAM50AQ14320 339 aaKnown RBP27.79■■■□□ 2.04
TRIM41-203ENST00000503114 ATP1B4Q9UN42 357 aaPredicted RBP27.79■■■□□ 2.04
TRIM41-203ENST00000503114 GRIN2BQ13224 1484 aa27.78■■■□□ 2.04
TRIM41-203ENST00000503114 FGD6Q6ZV73 1430 aa27.75■■■□□ 2.03
TRIM41-203ENST00000503114 MRC2Q9UBG0 1479 aa27.71■■■□□ 2.03
TRIM41-203ENST00000503114 YTHDC1Q96MU7 727 aaKnown RBP27.69■■■□□ 2.02
TRIM41-203ENST00000503114 SUPT6HQ7KZ85 1726 aaKnown RBP27.68■■■□□ 2.02
TRIM41-203ENST00000503114 PELP1Q8IZL8 1130 aaKnown RBP27.68■■■□□ 2.02
TRIM41-203ENST00000503114 ADAMTS12P58397 1594 aa27.67■■■□□ 2.02
TRIM41-203ENST00000503114 EHBP1L1Q8N3D4 1523 aa27.67■■■□□ 2.02
TRIM41-203ENST00000503114 MTUS2Q5JR59 1369 aa27.67■■■□□ 2.02
TRIM41-203ENST00000503114 NCOA2Q15596 1464 aa27.62■■■□□ 2.01
TRIM41-203ENST00000503114 IQGAP2Q13576 1575 aa27.61■■■□□ 2.01
TRIM41-203ENST00000503114 ARHGEF11O15085 1522 aa27.6■■■□□ 2.01
TRIM41-203ENST00000503114 MYOM3Q5VTT5 1437 aa27.6■■■□□ 2.01
TRIM41-203ENST00000503114 CCDC18Q5T9S5 1454 aa27.6■■■□□ 2.01
TRIM41-203ENST00000503114 UGGT2Q9NYU1 1516 aa27.58■■■□□ 2.01
TRIM41-203ENST00000503114 HECW1Q76N89 1606 aa27.57■■■□□ 2
TRIM41-203ENST00000503114 TIMELESSQ9UNS1 1208 aa27.57■■■□□ 2
TRIM41-203ENST00000503114 HFM1A2PYH4 1435 aa27.56■■■□□ 2
TRIM41-203ENST00000503114 PTPN23Q9H3S7 1636 aa27.56■■■□□ 2
TRIM41-203ENST00000503114 WDR62O43379 1518 aa27.56■■■□□ 2
TRIM41-203ENST00000503114 MAGI3Q5TCQ9 1506 aa27.54■■■□□ 2
TRIM41-203ENST00000503114 PTPRKQ15262 1439 aa27.53■■■□□ 2
TRIM41-203ENST00000503114 SIN3AQ96ST3 1273 aa27.5■■□□□ 1.99
TRIM41-203ENST00000503114 IFT140Q96RY7 1462 aa27.48■■□□□ 1.99
TRIM41-203ENST00000503114 UACAQ9BZF9 1416 aa27.47■■□□□ 1.99
TRIM41-203ENST00000503114 TCOF1Q13428 1488 aaKnown RBP27.46■■□□□ 1.99
TRIM41-203ENST00000503114 NAIPQ13075 1403 aa27.44■■□□□ 1.98
TRIM41-203ENST00000503114 EPRSP07814 1512 aaKnown RBP27.44■■□□□ 1.98
TRIM41-203ENST00000503114 GCC2Q8IWJ2 1684 aa27.41■■□□□ 1.98
TRIM41-203ENST00000503114 ZNF608Q9ULD9 1512 aaPredicted RBP27.38■■□□□ 1.97
TRIM41-203ENST00000503114 PPP1R15AO75807 674 aaPredicted RBP27.35■■□□□ 1.97
TRIM41-203ENST00000503114 CDK13Q14004 1512 aaKnown RBP27.34■■□□□ 1.97
TRIM41-203ENST00000503114 AKNAQ7Z591 1439 aa27.34■■□□□ 1.97
TRIM41-203ENST00000503114 KIAA0556O60303 1618 aa27.34■■□□□ 1.97
TRIM41-203ENST00000503114 KIAA0586Q9BVV6 1533 aa27.32■■□□□ 1.96
TRIM41-203ENST00000503114 ERCC6Q03468 1493 aa27.32■■□□□ 1.96
TRIM41-203ENST00000503114 MIA2Q96PC5 1412 aa27.31■■□□□ 1.96
TRIM41-203ENST00000503114 EIF4G3O43432 1585 aaKnown RBP27.31■■□□□ 1.96
TRIM41-203ENST00000503114 DISP1Q96F81 1524 aa27.28■■□□□ 1.96
TRIM41-203ENST00000503114 TONSLQ96HA7 1378 aa27.26■■□□□ 1.95
TRIM41-203ENST00000503114 GRIN2AQ12879 1464 aa27.25■■□□□ 1.95
TRIM41-203ENST00000503114 KDM5BQ9UGL1 1544 aa27.22■■□□□ 1.95
TRIM41-203ENST00000503114 RAPGEF6Q8TEU7 1601 aa27.22■■□□□ 1.95
TRIM41-203ENST00000503114 KDM6BO15054 1643 aa27.18■■□□□ 1.94
TRIM41-203ENST00000503114 NUP153P49790 1475 aaKnown RBP27.18■■□□□ 1.94
TRIM41-203ENST00000503114 DENND4BO75064 1496 aaPredicted RBP27.17■■□□□ 1.94
TRIM41-203ENST00000503114 MAGI1Q96QZ7 1491 aaPredicted RBP27.16■■□□□ 1.94
TRIM41-203ENST00000503114 DDX10Q13206 875 aaKnown RBP27.14■■□□□ 1.94
TRIM41-203ENST00000503114 DNMT1P26358 1616 aaKnown RBP27.13■■□□□ 1.93
TRIM41-203ENST00000503114 RRP7BPQ9NSQ0 103 aa27.12■■□□□ 1.93
TRIM41-203ENST00000503114 CEP170Q5SW79 1584 aa27.09■■□□□ 1.93
TRIM41-203ENST00000503114 ROCK1Q13464 1354 aa27.08■■□□□ 1.93
TRIM41-203ENST00000503114 CHIC2Q9UKJ5 165 aa27.08■■□□□ 1.93
TRIM41-203ENST00000503114 DAPK1P53355 1430 aa27.08■■□□□ 1.93
TRIM41-203ENST00000503114 SYNJ2O15056 1496 aa27.07■■□□□ 1.92
TRIM41-203ENST00000503114 KCNH8Q96L42 1107 aa27.06■■□□□ 1.92
TRIM41-203ENST00000503114 ADCY10Q96PN6 1610 aa27.03■■□□□ 1.92
TRIM41-203ENST00000503114 ARID3CA6NKF2 412 aa27.02■■□□□ 1.92
TRIM41-203ENST00000503114 ABCC5O15440 1437 aa27.02■■□□□ 1.92
TRIM41-203ENST00000503114 HIRIP3Q9BW71 556 aaPredicted RBP27.02■■□□□ 1.92
TRIM41-203ENST00000503114 ITSN2Q9NZM3 1697 aa27.01■■□□□ 1.91
TRIM41-203ENST00000503114 TROQ12816 1431 aaPredicted RBP26.99■■□□□ 1.91
TRIM41-203ENST00000503114 CCER2I3L3R5 266 aa26.98■■□□□ 1.91
TRIM41-203ENST00000503114 CDK11AQ9UQ88 783 aaPredicted RBP26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms