RNA–Protein interactions for RNA: ENST00000503114.1

TRIM41-203, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 1,904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-203ENST00000503114 NISCHQ9Y2I1 1504 aa40.39■■■■■ 4.06
TRIM41-203ENST00000503114 CCDC180Q9P1Z9 1646 aa34.65■■■■□ 3.14
TRIM41-203ENST00000503114 ZCCHC6Q5VYS8 1495 aaKnown RBP34.18■■■■□ 3.06
TRIM41-203ENST00000503114 SHROOM4Q9ULL8 1493 aa33.88■■■■□ 3.01
TRIM41-203ENST00000503114 DCAF1Q9Y4B6 1507 aa33.34■■■□□ 2.93
TRIM41-203ENST00000503114 SUPT5HO00267 1087 aaKnown RBP33.12■■■□□ 2.89
TRIM41-203ENST00000503114 DCAF8L2P0C7V8 631 aa32.98■■■□□ 2.87
TRIM41-203ENST00000503114 MYO15BQ96JP2 1530 aa32.47■■■□□ 2.79
TRIM41-203ENST00000503114 CHIC1Q5VXU3 224 aa32.31■■■□□ 2.76
TRIM41-203ENST00000503114 ABCC9O60706 1549 aa32.25■■■□□ 2.75
TRIM41-203ENST00000503114 SCRIBQ14160 1630 aa32.13■■■□□ 2.73
TRIM41-203ENST00000503114 NACADO15069 1562 aa31.96■■■□□ 2.71
TRIM41-203ENST00000503114 RSF1Q96T23 1441 aaPredicted RBP31.81■■■□□ 2.68
TRIM41-203ENST00000503114 RB1CC1Q8TDY2 1594 aa31.54■■■□□ 2.64
TRIM41-203ENST00000503114 CECR2Q9BXF3 1484 aa31.36■■■□□ 2.61
TRIM41-203ENST00000503114 MROH2BQ7Z745 1585 aa31.31■■■□□ 2.6
TRIM41-203ENST00000503114 LOC105371045A0A1W2PR82 267 aa31.17■■■□□ 2.58
TRIM41-203ENST00000503114 WIZO95785 1651 aa31.16■■■□□ 2.58
TRIM41-203ENST00000503114 BAZ1AQ9NRL2 1556 aaPredicted RBP31.08■■■□□ 2.57
TRIM41-203ENST00000503114 UNC13AQ9UPW8 1703 aa31.03■■■□□ 2.56
TRIM41-203ENST00000503114 HRCP23327 699 aa31.02■■■□□ 2.56
TRIM41-203ENST00000503114 TRIM41Q8WV44 630 aa30.98■■■□□ 2.55
TRIM41-203ENST00000503114 PCGF6Q9BYE7 350 aa30.96■■■□□ 2.55
TRIM41-203ENST00000503114 EIF4G1Q04637 1599 aaKnown RBP30.85■■■□□ 2.53
TRIM41-203ENST00000503114 SMARCA4P51532 1647 aa30.83■■■□□ 2.53
TRIM41-203ENST00000503114 TOP2AP11388 1531 aaKnown RBP30.77■■■□□ 2.52
TRIM41-203ENST00000503114 TRIM26Q12899 539 aaPredicted RBP30.6■■■□□ 2.49
TRIM41-203ENST00000503114 BICRAQ9NZM4 1560 aa30.57■■■□□ 2.48
TRIM41-203ENST00000503114 SMARCA2P51531 1590 aa30.56■■■□□ 2.48
TRIM41-203ENST00000503114 FAM9AQ8IZU1 332 aaPredicted RBP30.53■■■□□ 2.48
TRIM41-203ENST00000503114 CCDC88BA6NC98 1476 aa30.5■■■□□ 2.47
TRIM41-203ENST00000503114 PEG3Q9GZU2 1588 aa30.37■■■□□ 2.45
TRIM41-203ENST00000503114 ABCC8Q09428 1581 aa30.3■■■□□ 2.44
TRIM41-203ENST00000503114 PABPN1Q86U42 306 aaKnown RBP eCLIP30.22■■■□□ 2.43
TRIM41-203ENST00000503114 PPARGC1BQ86YN6 1023 aaKnown RBP30.19■■■□□ 2.42
TRIM41-203ENST00000503114 EHMT2Q96KQ7 1210 aa30.12■■■□□ 2.41
TRIM41-203ENST00000503114 ATAD2BQ9ULI0 1458 aa30.01■■■□□ 2.39
TRIM41-203ENST00000503114 EEA1Q15075 1411 aa30■■■□□ 2.39
TRIM41-203ENST00000503114 SOGA1O94964 1423 aa29.95■■■□□ 2.38
TRIM41-203ENST00000503114 ZEB1P37275 1124 aaPredicted RBP29.92■■■□□ 2.38
TRIM41-203ENST00000503114 BAZ1BQ9UIG0 1483 aaKnown RBP29.89■■■□□ 2.37
TRIM41-203ENST00000503114 WRNQ14191 1432 aaPredicted RBP eCLIP29.87■■■□□ 2.374e-9■■□□□ 14.1
TRIM41-203ENST00000503114 TNIKQ9UKE5 1360 aa29.82■■■□□ 2.36
TRIM41-203ENST00000503114 RUSC2Q8N2Y8 1516 aa29.8■■■□□ 2.36
TRIM41-203ENST00000503114 CEP162Q5TB80 1403 aa29.79■■■□□ 2.36
TRIM41-203ENST00000503114 SYNJ1O43426 1573 aa29.79■■■□□ 2.36
TRIM41-203ENST00000503114 CSRNP3Q8WYN3 585 aa29.75■■■□□ 2.35
TRIM41-203ENST00000503114 GOLGA3Q08378 1498 aa29.7■■■□□ 2.34
TRIM41-203ENST00000503114 KIF21BO75037 1637 aa29.64■■■□□ 2.34
TRIM41-203ENST00000503114 HMGXB3Q12766 1538 aa29.58■■■□□ 2.33
TRIM41-203ENST00000503114 CEP164Q9UPV0 1460 aa29.56■■■□□ 2.32
TRIM41-203ENST00000503114 TOP2BQ02880 1626 aa29.52■■■□□ 2.32
TRIM41-203ENST00000503114 NCAPD3P42695 1498 aa29.5■■■□□ 2.31
TRIM41-203ENST00000503114 BIVM-ERCC5R4GMW8 1640 aa29.49■■■□□ 2.31
TRIM41-203ENST00000503114 UBTFP17480 764 aaKnown RBP29.49■■■□□ 2.31
TRIM41-203ENST00000503114 RAPGEF2Q9Y4G8 1499 aa29.28■■■□□ 2.28
TRIM41-203ENST00000503114 CLIP1P30622 1438 aa29.26■■■□□ 2.28
TRIM41-203ENST00000503114 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.24■■■□□ 2.27
TRIM41-203ENST00000503114 PRDM2Q13029 1718 aa29.21■■■□□ 2.27
TRIM41-203ENST00000503114 CFTRP13569 1480 aa29.2■■■□□ 2.27
TRIM41-203ENST00000503114 CCER1Q8TC90 406 aaPredicted RBP29.2■■■□□ 2.26
TRIM41-203ENST00000503114 CUX1P39880 1505 aa29.19■■■□□ 2.26
TRIM41-203ENST00000503114 ERICH3Q5RHP9 1530 aa29.19■■■□□ 2.26
TRIM41-203ENST00000503114 VPS8Q8N3P4 1428 aa29.19■■■□□ 2.26
TRIM41-203ENST00000503114 TTBK1Q5TCY1 1321 aaPredicted RBP29.15■■■□□ 2.26
TRIM41-203ENST00000503114 PRXQ9BXM0 1461 aa29.12■■■□□ 2.25
TRIM41-203ENST00000503114 KIF27Q86VH2 1401 aa28.98■■■□□ 2.23
TRIM41-203ENST00000503114 CC2D2AQ9P2K1 1620 aa28.95■■■□□ 2.23
TRIM41-203ENST00000503114 ARAP1Q96P48 1450 aa28.89■■■□□ 2.22
TRIM41-203ENST00000503114 CADPSQ9ULU8 1353 aa28.84■■■□□ 2.21
TRIM41-203ENST00000503114 APLP2Q06481 763 aa28.83■■■□□ 2.21
TRIM41-203ENST00000503114 RANGAP1P46060 587 aaPredicted RBP28.73■■■□□ 2.19
TRIM41-203ENST00000503114 CUX2O14529 1486 aa28.68■■■□□ 2.18
TRIM41-203ENST00000503114 HNRNPUL2Q1KMD3 747 aaKnown RBP28.68■■■□□ 2.18
TRIM41-203ENST00000503114 FGD5Q6ZNL6 1462 aa28.66■■■□□ 2.18
TRIM41-203ENST00000503114 ARHGAP35Q9NRY4 1499 aa28.66■■■□□ 2.18
TRIM41-203ENST00000503114 IGF1RP08069 1367 aa28.64■■■□□ 2.18
TRIM41-203ENST00000503114 DIEXFQ68CQ4 756 aaKnown RBP28.56■■■□□ 2.16
TRIM41-203ENST00000503114 FANCD2Q9BXW9 1451 aa28.56■■■□□ 2.16
TRIM41-203ENST00000503114 RRBP1Q9P2E9 1410 aaKnown RBP28.52■■■□□ 2.16
TRIM41-203ENST00000503114 DNMBPQ6XZF7 1577 aa28.52■■■□□ 2.16
TRIM41-203ENST00000503114 KANK4Q5T7N3 995 aaPredicted RBP28.51■■■□□ 2.16
TRIM41-203ENST00000503114 CARMIL1Q5VZK9 1371 aa28.5■■■□□ 2.15
TRIM41-203ENST00000503114 ZNF316A6NFI3 1004 aaPredicted RBP28.47■■■□□ 2.15
TRIM41-203ENST00000503114 MAP3K1Q13233 1512 aa28.45■■■□□ 2.14
TRIM41-203ENST00000503114 ABCA10Q8WWZ4 1543 aa28.41■■■□□ 2.14
TRIM41-203ENST00000503114 TOPBP1Q92547 1522 aa28.4■■■□□ 2.14
TRIM41-203ENST00000503114 CLSPNQ9HAW4 1339 aa28.39■■■□□ 2.13
TRIM41-203ENST00000503114 TIAM1Q13009 1591 aa28.39■■■□□ 2.13
TRIM41-203ENST00000503114 LAMC3Q9Y6N6 1575 aa28.39■■■□□ 2.13
TRIM41-203ENST00000503114 SCAF1Q9H7N4 1312 aaKnown RBP28.36■■■□□ 2.13
TRIM41-203ENST00000503114 POLA1P09884 1462 aaPredicted RBP28.36■■■□□ 2.13
TRIM41-203ENST00000503114 DHX57Q6P158 1386 aaKnown RBP28.33■■■□□ 2.13
TRIM41-203ENST00000503114 NESP48681 1621 aa28.32■■■□□ 2.12
TRIM41-203ENST00000503114 CUL7Q14999 1698 aa28.32■■■□□ 2.12
TRIM41-203ENST00000503114 CCNB3Q8WWL7 1395 aa28.31■■■□□ 2.12
TRIM41-203ENST00000503114 RAD54L2Q9Y4B4 1467 aa28.31■■■□□ 2.12
TRIM41-203ENST00000503114 WDR97A6NE52 1622 aa28.3■■■□□ 2.12
TRIM41-203ENST00000503114 CFAP43Q8NDM7 1665 aa28.29■■■□□ 2.12
TRIM41-203ENST00000503114 FHAD1B1AJZ9 1412 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms