RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 SPRYD3Q8NCJ5 442 aa8.21□□□□□ -1.1
HMGB1P21-201ENST00000502313 SPDYE1Q8NFV5 336 aaPredicted RBP8.21□□□□□ -1.1
HMGB1P21-201ENST00000502313 CLEC11AQ9Y240 323 aa8.17□□□□□ -1.1
HMGB1P21-201ENST00000502313 NPM1P06748 294 aaKnown RBP eCLIP8.16□□□□□ -1.1
HMGB1P21-201ENST00000502313 CHRDL2Q6WN34 429 aa8.16□□□□□ -1.1
HMGB1P21-201ENST00000502313 DCAF8Q5TAQ9 597 aa8.15□□□□□ -1.1
HMGB1P21-201ENST00000502313 AKT1S1Q96B36 256 aa8.15□□□□□ -1.1
HMGB1P21-201ENST00000502313 KDM2AQ9Y2K7 1162 aa8.15□□□□□ -1.1
HMGB1P21-201ENST00000502313 PRR29P0C7W0 189 aa8.14□□□□□ -1.11
HMGB1P21-201ENST00000502313 FAM212AQ96EL1 285 aa8.14□□□□□ -1.11
HMGB1P21-201ENST00000502313 REM2Q8IYK8 340 aaPredicted RBP8.13□□□□□ -1.11
HMGB1P21-201ENST00000502313 HS6ST3Q8IZP7 471 aa8.1□□□□□ -1.11
HMGB1P21-201ENST00000502313 GTF3C3Q9Y5Q9 886 aa8.1□□□□□ -1.11
HMGB1P21-201ENST00000502313 RIOK3O14730 519 aaKnown RBP8.08□□□□□ -1.12
HMGB1P21-201ENST00000502313 NUBP1P53384 320 aa8.05□□□□□ -1.12
HMGB1P21-201ENST00000502313 TSHZ2Q9NRE2 1034 aa8.05□□□□□ -1.12
HMGB1P21-201ENST00000502313 STK25O00506 426 aa8.04□□□□□ -1.12
HMGB1P21-201ENST00000502313 NBR1Q14596 966 aa8.04□□□□□ -1.12
HMGB1P21-201ENST00000502313 PITPNM1O00562 1244 aa8.03□□□□□ -1.12
HMGB1P21-201ENST00000502313 VGFO15240 615 aaPredicted RBP8.03□□□□□ -1.12
HMGB1P21-201ENST00000502313 HOMEZQ8IX15 550 aa8.02□□□□□ -1.13
HMGB1P21-201ENST00000502313 PIP4P2Q8N4L2 257 aa8.02□□□□□ -1.13
HMGB1P21-201ENST00000502313 CREBZFQ9NS37 354 aa8.01□□□□□ -1.13
HMGB1P21-201ENST00000502313 RYDENQ9NUL5 291 aaKnown RBP8.01□□□□□ -1.13
HMGB1P21-201ENST00000502313 RNF25Q96BH1 459 aaPredicted RBP8□□□□□ -1.13
HMGB1P21-201ENST00000502313 FXR2P51116 673 aaKnown RBP eCLIP7.98□□□□□ -1.13
HMGB1P21-201ENST00000502313 STK24Q9Y6E0 443 aa7.97□□□□□ -1.13
HMGB1P21-201ENST00000502313 RASEFQ8IZ41 740 aa7.95□□□□□ -1.14
HMGB1P21-201ENST00000502313 DNAJC5Q9H3Z4 198 aa7.95□□□□□ -1.14
HMGB1P21-201ENST00000502313 PYGBP11216 843 aa7.94□□□□□ -1.14
HMGB1P21-201ENST00000502313 CHRM1P11229 460 aaPredicted RBP7.94□□□□□ -1.14
HMGB1P21-201ENST00000502313 BCL11BQ9C0K0 894 aaPredicted RBP7.94□□□□□ -1.14
HMGB1P21-201ENST00000502313 ERICH6Q7L0X2 663 aa7.92□□□□□ -1.14
HMGB1P21-201ENST00000502313 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.91□□□□□ -1.14
HMGB1P21-201ENST00000502313 MNX1P50219 401 aaPredicted RBP7.91□□□□□ -1.14
HMGB1P21-201ENST00000502313 TMEM132AQ24JP5 1023 aa7.91□□□□□ -1.14
HMGB1P21-201ENST00000502313 ZFP91Q96JP5 570 aaPredicted RBP7.91□□□□□ -1.14
HMGB1P21-201ENST00000502313 EVX2Q03828 476 aa7.89□□□□□ -1.15
HMGB1P21-201ENST00000502313 ZNF467Q7Z7K2 595 aaPredicted RBP7.89□□□□□ -1.15
HMGB1P21-201ENST00000502313 TSPYL2Q9H2G4 693 aaPredicted RBP7.89□□□□□ -1.15
HMGB1P21-201ENST00000502313 GTPBP6O43824 516 aaPredicted RBP7.88□□□□□ -1.15
HMGB1P21-201ENST00000502313 NKX1-1Q15270 411 aaPredicted RBP7.88□□□□□ -1.15
HMGB1P21-201ENST00000502313 SGIP1Q9BQI5 828 aa7.88□□□□□ -1.15
HMGB1P21-201ENST00000502313 PAK3O75914 559 aaPredicted RBP7.87□□□□□ -1.15
HMGB1P21-201ENST00000502313 C14orf37Q86TY3 774 aa7.85□□□□□ -1.15
HMGB1P21-201ENST00000502313 CHADLQ6NUI6 762 aa7.84□□□□□ -1.15
HMGB1P21-201ENST00000502313 PDAP1Q13442 181 aaKnown RBP7.83□□□□□ -1.16
HMGB1P21-201ENST00000502313 P3H3Q8IVL6 736 aa7.83□□□□□ -1.16
HMGB1P21-201ENST00000502313 SP7Q8TDD2 431 aaPredicted RBP7.83□□□□□ -1.16
HMGB1P21-201ENST00000502313 WDR70Q9NW82 654 aa7.83□□□□□ -1.16
HMGB1P21-201ENST00000502313 FARP1Q9Y4F1 1045 aaPredicted RBP7.82□□□□□ -1.16
HMGB1P21-201ENST00000502313 HAX1O00165 279 aa7.81□□□□□ -1.16
HMGB1P21-201ENST00000502313 PRKAR2AP13861 404 aaKnown RBP7.8□□□□□ -1.16
HMGB1P21-201ENST00000502313 PODXL2Q9NZ53 605 aa7.78□□□□□ -1.16
HMGB1P21-201ENST00000502313 RANGAP1P46060 587 aaPredicted RBP7.77□□□□□ -1.17
HMGB1P21-201ENST00000502313 PCDHB8Q9UN66 801 aa7.76□□□□□ -1.17
HMGB1P21-201ENST00000502313 PCDHB13Q9Y5F0 798 aa7.76□□□□□ -1.17
HMGB1P21-201ENST00000502313 PSEN1P49768 467 aa7.75□□□□□ -1.17
HMGB1P21-201ENST00000502313 ZNF579Q8NAF0 562 aaKnown RBP7.75□□□□□ -1.17
HMGB1P21-201ENST00000502313 C19orf67A6NJJ6 358 aa7.72□□□□□ -1.17
HMGB1P21-201ENST00000502313 SUPT5HO00267 1087 aaKnown RBP7.71□□□□□ -1.18
HMGB1P21-201ENST00000502313 CCDC61Q9Y6R9 512 aa7.71□□□□□ -1.18
HMGB1P21-201ENST00000502313 GOLGA2Q08379 1002 aa7.7□□□□□ -1.18
HMGB1P21-201ENST00000502313 NLRP6P59044 892 aa7.69□□□□□ -1.18
HMGB1P21-201ENST00000502313 CABP2Q9NPB3 220 aa7.68□□□□□ -1.18
HMGB1P21-201ENST00000502313 SOX12O15370 315 aa7.65□□□□□ -1.18
HMGB1P21-201ENST00000502313 IFNL1Q8IU54 200 aa7.65□□□□□ -1.18
HMGB1P21-201ENST00000502313 MFRPQ9BY79 579 aa7.65□□□□□ -1.18
HMGB1P21-201ENST00000502313 MAP3K13O43283 966 aa7.64□□□□□ -1.19
HMGB1P21-201ENST00000502313 EFCAB3Q8N7B9 438 aa7.64□□□□□ -1.19
HMGB1P21-201ENST00000502313 KCNV2Q8TDN2 545 aa7.63□□□□□ -1.19
HMGB1P21-201ENST00000502313 ZRANB1Q9UGI0 708 aa7.63□□□□□ -1.19
HMGB1P21-201ENST00000502313 CADPS2Q86UW7 1296 aa7.62□□□□□ -1.19
HMGB1P21-201ENST00000502313 GABBR2O75899 941 aa7.61□□□□□ -1.19
HMGB1P21-201ENST00000502313 CD44P16070 742 aaKnown RBP7.61□□□□□ -1.19
HMGB1P21-201ENST00000502313 KIF12Q96FN5 646 aa7.61□□□□□ -1.19
HMGB1P21-201ENST00000502313 E2F4Q16254 413 aa7.59□□□□□ -1.19
HMGB1P21-201ENST00000502313 LMOD2Q6P5Q4 547 aa7.59□□□□□ -1.19
HMGB1P21-201ENST00000502313 PHF8Q9UPP1 1060 aa7.59□□□□□ -1.19
HMGB1P21-201ENST00000502313 TRIM26Q12899 539 aaPredicted RBP7.57□□□□□ -1.2
HMGB1P21-201ENST00000502313 MKRN3Q13064 507 aaKnown RBP7.57□□□□□ -1.2
HMGB1P21-201ENST00000502313 ARHGEF1Q92888 912 aaKnown RBP7.57□□□□□ -1.2
HMGB1P21-201ENST00000502313 UBTFP17480 764 aaKnown RBP7.56□□□□□ -1.2
HMGB1P21-201ENST00000502313 NPM2Q86SE8 214 aaKnown RBP7.56□□□□□ -1.2
HMGB1P21-201ENST00000502313 FBXO22Q8NEZ5 403 aa7.55□□□□□ -1.2
HMGB1P21-201ENST00000502313 PHF12Q96QT6 1004 aa7.55□□□□□ -1.2
HMGB1P21-201ENST00000502313 TMEM106CQ9BVX2 250 aa7.55□□□□□ -1.2
HMGB1P21-201ENST00000502313 PPP1R37O75864 691 aa7.54□□□□□ -1.2
HMGB1P21-201ENST00000502313 PDE4AP27815 886 aa7.54□□□□□ -1.2
HMGB1P21-201ENST00000502313 SMYD5Q6GMV2 418 aa7.54□□□□□ -1.2
HMGB1P21-201ENST00000502313 LARP6Q9BRS8 491 aaKnown RBP7.54□□□□□ -1.2
HMGB1P21-201ENST00000502313 POTEIP0CG38 1075 aa7.53□□□□□ -1.2
HMGB1P21-201ENST00000502313 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.52□□□□□ -1.21
HMGB1P21-201ENST00000502313 DDX27Q96GQ7 796 aaKnown RBP7.52□□□□□ -1.21
HMGB1P21-201ENST00000502313 HRCP23327 699 aa7.5□□□□□ -1.21
HMGB1P21-201ENST00000502313 MS4A3Q96HJ5 214 aa7.47□□□□□ -1.21
HMGB1P21-201ENST00000502313 G3V3G9 751 aa7.46□□□□□ -1.22
HMGB1P21-201ENST00000502313 SEMA3EO15041 775 aa7.46□□□□□ -1.22
HMGB1P21-201ENST00000502313 BRPF1P55201 1214 aaPredicted RBP7.46□□□□□ -1.22
HMGB1P21-201ENST00000502313 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms