RNA–Protein interactions for RNA: ENST00000497886.5

TSC2-216, Transcript of TSC complex subunit 2, humanhuman

TSL 2

Gene TSC2, Length 3,248 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-216ENST00000497886 ARID3CA6NKF2 412 aa19.43■□□□□ 0.7
TSC2-216ENST00000497886 PHLDB1Q86UU1 1377 aa19.42■□□□□ 0.7
TSC2-216ENST00000497886 CFTRP13569 1480 aa19.41■□□□□ 0.7
TSC2-216ENST00000497886 FHOD3Q2V2M9 1422 aa19.38■□□□□ 0.69
TSC2-216ENST00000497886 FKBP8Q14318 412 aa19.38■□□□□ 0.69
TSC2-216ENST00000497886 SETD5Q9C0A6 1442 aa19.36■□□□□ 0.69
TSC2-216ENST00000497886 FGD5Q6ZNL6 1462 aa19.36■□□□□ 0.69
TSC2-216ENST00000497886 HMGXB3Q12766 1538 aa19.32■□□□□ 0.68
TSC2-216ENST00000497886 RAD54L2Q9Y4B4 1467 aa19.32■□□□□ 0.68
TSC2-216ENST00000497886 CADPSQ9ULU8 1353 aa19.31■□□□□ 0.68
TSC2-216ENST00000497886 CHIC2Q9UKJ5 165 aa19.3■□□□□ 0.68
TSC2-216ENST00000497886 CNGB1Q14028 1251 aaPredicted RBP19.3■□□□□ 0.68
TSC2-216ENST00000497886 WDR97A6NE52 1622 aa19.29■□□□□ 0.68
TSC2-216ENST00000497886 LRRC9Q6ZRR7 1453 aa19.29■□□□□ 0.68
TSC2-216ENST00000497886 MAPKBP1O60336 1514 aa19.28■□□□□ 0.68
TSC2-216ENST00000497886 TIAM1Q13009 1591 aa19.28■□□□□ 0.68
TSC2-216ENST00000497886 TSHZ2Q9NRE2 1034 aa19.26■□□□□ 0.67
TSC2-216ENST00000497886 ANP32CO43423 234 aa19.25■□□□□ 0.67
TSC2-216ENST00000497886 NEFLP07196 543 aa19.23■□□□□ 0.67
TSC2-216ENST00000497886 RRP7BPQ9NSQ0 103 aa19.23■□□□□ 0.67
TSC2-216ENST00000497886 TONSLQ96HA7 1378 aa19.22■□□□□ 0.67
TSC2-216ENST00000497886 IRX6P78412 446 aaPredicted RBP19.22■□□□□ 0.67
TSC2-216ENST00000497886 MTUS2Q5JR59 1369 aa19.21■□□□□ 0.67
TSC2-216ENST00000497886 FHAD1B1AJZ9 1412 aa19.19■□□□□ 0.66
TSC2-216ENST00000497886 NESP48681 1621 aa19.19■□□□□ 0.66
TSC2-216ENST00000497886 PCF11O94913 1555 aaKnown RBP19.19■□□□□ 0.66
TSC2-216ENST00000497886 TDRD9Q8NDG6 1382 aaKnown RBP19.18■□□□□ 0.66
TSC2-216ENST00000497886 PPP1R15AO75807 674 aaPredicted RBP19.18■□□□□ 0.66
TSC2-216ENST00000497886 FANCD2Q9BXW9 1451 aa19.18■□□□□ 0.66
TSC2-216ENST00000497886 FOXD1Q16676 465 aa19.13■□□□□ 0.65
TSC2-216ENST00000497886 HNRNPUQ00839 825 aaKnown RBP eCLIP19.1■□□□□ 0.65
TSC2-216ENST00000497886 DNAJC5BQ9UF47 199 aa19.1■□□□□ 0.65
TSC2-216ENST00000497886 SENP3-EIF4A1A0A087X0R7 540 aa19.09■□□□□ 0.65
TSC2-216ENST00000497886 POLR3GLQ9BT43 218 aa19.08■□□□□ 0.64
TSC2-216ENST00000497886 CC2D2AQ9P2K1 1620 aa19.05■□□□□ 0.64
TSC2-216ENST00000497886 POLA1P09884 1462 aaPredicted RBP19.05■□□□□ 0.64
TSC2-216ENST00000497886 CCDC18Q5T9S5 1454 aa19.03■□□□□ 0.64
TSC2-216ENST00000497886 BCL11AQ9H165 835 aa19.02■□□□□ 0.64
TSC2-216ENST00000497886 FGD6Q6ZV73 1430 aa19.02■□□□□ 0.64
TSC2-216ENST00000497886 PTPRKQ15262 1439 aa19.02■□□□□ 0.64
TSC2-216ENST00000497886 TOPBP1Q92547 1522 aa19■□□□□ 0.63
TSC2-216ENST00000497886 CASKIN1Q8WXD9 1431 aa18.98■□□□□ 0.63
TSC2-216ENST00000497886 FAM9BQ8IZU0 186 aa18.98■□□□□ 0.63
TSC2-216ENST00000497886 ZNF326Q5BKZ1 582 aaKnown RBP18.98■□□□□ 0.63
TSC2-216ENST00000497886 HSPA5P11021 654 aaKnown RBP18.96■□□□□ 0.63
TSC2-216ENST00000497886 FYCO1Q9BQS8 1478 aa18.96■□□□□ 0.63
TSC2-216ENST00000497886 MAP3K1Q13233 1512 aa18.96■□□□□ 0.63
TSC2-216ENST00000497886 FMN1Q68DA7 1419 aa18.95■□□□□ 0.62
TSC2-216ENST00000497886 AQRO60306 1485 aaKnown RBP eCLIP18.94■□□□□ 0.627e-7■■■■■ 38.9
TSC2-216ENST00000497886 CFAP43Q8NDM7 1665 aa18.94■□□□□ 0.62
TSC2-216ENST00000497886 CCER2I3L3R5 266 aa18.92■□□□□ 0.62
TSC2-216ENST00000497886 CCDC184Q52MB2 194 aa18.92■□□□□ 0.62
TSC2-216ENST00000497886 TIMELESSQ9UNS1 1208 aa18.92■□□□□ 0.62
TSC2-216ENST00000497886 RBM19Q9Y4C8 960 aaKnown RBP18.92■□□□□ 0.62
TSC2-216ENST00000497886 PRDM2Q13029 1718 aa18.92■□□□□ 0.62
TSC2-216ENST00000497886 NCOA2Q15596 1464 aa18.91■□□□□ 0.62
TSC2-216ENST00000497886 ANP32EQ9BTT0 268 aa18.91■□□□□ 0.62
TSC2-216ENST00000497886 ABCA10Q8WWZ4 1543 aa18.9■□□□□ 0.62
TSC2-216ENST00000497886 DNMBPQ6XZF7 1577 aa18.89■□□□□ 0.61
TSC2-216ENST00000497886 ZNF777Q9ULD5 760 aaPredicted RBP18.88■□□□□ 0.61
TSC2-216ENST00000497886 NAIPQ13075 1403 aa18.87■□□□□ 0.61
TSC2-216ENST00000497886 UACAQ9BZF9 1416 aa18.87■□□□□ 0.61
TSC2-216ENST00000497886 WASHC2AQ641Q2 1341 aa18.87■□□□□ 0.61
TSC2-216ENST00000497886 L3MBTL2Q969R5 705 aa18.87■□□□□ 0.61
TSC2-216ENST00000497886 EIF4G2P78344 907 aaKnown RBP eCLIP18.86■□□□□ 0.61
TSC2-216ENST00000497886 MYOM3Q5VTT5 1437 aa18.85■□□□□ 0.61
TSC2-216ENST00000497886 GAPVD1Q14C86 1478 aa18.85■□□□□ 0.61
TSC2-216ENST00000497886 MPHOSPH9Q99550 1183 aa18.84■□□□□ 0.61
TSC2-216ENST00000497886 URB2Q14146 1524 aaKnown RBP18.84■□□□□ 0.61
TSC2-216ENST00000497886 HFM1A2PYH4 1435 aa18.84■□□□□ 0.61
TSC2-216ENST00000497886 ZNF644Q9H582 1327 aaPredicted RBP18.83■□□□□ 0.61
TSC2-216ENST00000497886 MRS2Q9HD23 443 aa18.83■□□□□ 0.61
TSC2-216ENST00000497886 EFCAB5A4FU69 1503 aa18.83■□□□□ 0.6
TSC2-216ENST00000497886 SNAPC4Q5SXM2 1469 aa18.82■□□□□ 0.6
TSC2-216ENST00000497886 C11orf95C9JLR9 678 aaPredicted RBP18.82■□□□□ 0.6
TSC2-216ENST00000497886 PTPN23Q9H3S7 1636 aa18.81■□□□□ 0.6
TSC2-216ENST00000497886 FBLN2P98095 1184 aa18.81■□□□□ 0.6
TSC2-216ENST00000497886 SLC4A1APQ9BWU0 796 aaKnown RBP18.79■□□□□ 0.6
TSC2-216ENST00000497886 CTTNBP2Q8WZ74 1663 aa18.79■□□□□ 0.6
TSC2-216ENST00000497886 CDK13Q14004 1512 aaKnown RBP18.76■□□□□ 0.59
TSC2-216ENST00000497886 B4GALNT3Q6L9W6 998 aa18.76■□□□□ 0.59
TSC2-216ENST00000497886 CDK11AQ9UQ88 783 aaPredicted RBP18.75■□□□□ 0.59
TSC2-216ENST00000497886 ERICH6Q7L0X2 663 aa18.75■□□□□ 0.59
TSC2-216ENST00000497886 NBPF8Q3BBV2 869 aa18.74■□□□□ 0.59
TSC2-216ENST00000497886 CUL7Q14999 1698 aa18.74■□□□□ 0.59
TSC2-216ENST00000497886 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.73■□□□□ 0.592e-6■■■■■ 33.8
TSC2-216ENST00000497886 MAGI3Q5TCQ9 1506 aa18.73■□□□□ 0.59
TSC2-216ENST00000497886 LRRIQ1Q96JM4 1722 aa18.72■□□□□ 0.59
TSC2-216ENST00000497886 GRIN2BQ13224 1484 aa18.7■□□□□ 0.58
TSC2-216ENST00000497886 KDM6BO15054 1643 aa18.7■□□□□ 0.58
TSC2-216ENST00000497886 SUPT6HQ7KZ85 1726 aaKnown RBP18.7■□□□□ 0.58
TSC2-216ENST00000497886 PDS5BQ9NTI5 1447 aa18.68■□□□□ 0.58
TSC2-216ENST00000497886 KDM2AQ9Y2K7 1162 aa18.68■□□□□ 0.58
TSC2-216ENST00000497886 SALL2Q9Y467 1007 aaPredicted RBP18.67■□□□□ 0.58
TSC2-216ENST00000497886 PRKRIP1Q9H875 184 aaPredicted RBP18.67■□□□□ 0.58
TSC2-216ENST00000497886 EHBP1L1Q8N3D4 1523 aa18.65■□□□□ 0.58
TSC2-216ENST00000497886 MSH5O43196 834 aa18.65■□□□□ 0.58
TSC2-216ENST00000497886 CFDP1Q9UEE9 299 aaPredicted RBP18.61■□□□□ 0.57
TSC2-216ENST00000497886 EPRSP07814 1512 aaKnown RBP18.61■□□□□ 0.57
TSC2-216ENST00000497886 UGGT2Q9NYU1 1516 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms