RNA–Protein interactions for RNA: ENST00000497886.5

TSC2-216, Transcript of TSC complex subunit 2, humanhuman

TSL 2

Gene TSC2, Length 3,248 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-216ENST00000497886 NISCHQ9Y2I1 1504 aa26.98■■□□□ 1.91
TSC2-216ENST00000497886 SHROOM4Q9ULL8 1493 aa24.12■■□□□ 1.45
TSC2-216ENST00000497886 SUPT5HO00267 1087 aaKnown RBP23.76■■□□□ 1.39
TSC2-216ENST00000497886 DCAF8L2P0C7V8 631 aa23.52■■□□□ 1.35
TSC2-216ENST00000497886 ZCCHC6Q5VYS8 1495 aaKnown RBP22.77■■□□□ 1.24
TSC2-216ENST00000497886 CHIC1Q5VXU3 224 aa22.73■■□□□ 1.23
TSC2-216ENST00000497886 MYO15BQ96JP2 1530 aa22.66■■□□□ 1.22
TSC2-216ENST00000497886 PCGF6Q9BYE7 350 aa22.62■■□□□ 1.21
TSC2-216ENST00000497886 CCDC180Q9P1Z9 1646 aa22.46■■□□□ 1.19
TSC2-216ENST00000497886 LOC105371045A0A1W2PR82 267 aa22.43■■□□□ 1.18
TSC2-216ENST00000497886 HRCP23327 699 aa22.36■■□□□ 1.17
TSC2-216ENST00000497886 PPARGC1BQ86YN6 1023 aaKnown RBP22.34■■□□□ 1.17
TSC2-216ENST00000497886 EHMT2Q96KQ7 1210 aa22.29■■□□□ 1.16
TSC2-216ENST00000497886 FAM9AQ8IZU1 332 aaPredicted RBP22.11■■□□□ 1.13
TSC2-216ENST00000497886 TRIM41Q8WV44 630 aa21.84■■□□□ 1.09
TSC2-216ENST00000497886 SCRIBQ14160 1630 aa21.78■■□□□ 1.08
TSC2-216ENST00000497886 TRIM26Q12899 539 aaPredicted RBP21.74■■□□□ 1.07
TSC2-216ENST00000497886 DCAF1Q9Y4B6 1507 aa21.69■■□□□ 1.06
TSC2-216ENST00000497886 RSF1Q96T23 1441 aaPredicted RBP21.59■■□□□ 1.05
TSC2-216ENST00000497886 TTBK1Q5TCY1 1321 aaPredicted RBP21.54■■□□□ 1.04
TSC2-216ENST00000497886 ABCC9O60706 1549 aa21.54■■□□□ 1.04
TSC2-216ENST00000497886 RB1CC1Q8TDY2 1594 aa21.47■■□□□ 1.03
TSC2-216ENST00000497886 CECR2Q9BXF3 1484 aa21.35■■□□□ 1.01
TSC2-216ENST00000497886 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.23■□□□□ 0.99
TSC2-216ENST00000497886 ZEB1P37275 1124 aaPredicted RBP21.19■□□□□ 0.98
TSC2-216ENST00000497886 MROH2BQ7Z745 1585 aa21.18■□□□□ 0.98
TSC2-216ENST00000497886 CCER1Q8TC90 406 aaPredicted RBP21.12■□□□□ 0.97
TSC2-216ENST00000497886 WIZO95785 1651 aa21.09■□□□□ 0.97
TSC2-216ENST00000497886 RANGAP1P46060 587 aaPredicted RBP20.95■□□□□ 0.94
TSC2-216ENST00000497886 UBTFP17480 764 aaKnown RBP20.93■□□□□ 0.94
TSC2-216ENST00000497886 PABPN1Q86U42 306 aaKnown RBP eCLIP20.92■□□□□ 0.948e-7■■■□□ 18.8
TSC2-216ENST00000497886 NACADO15069 1562 aa20.9■□□□□ 0.94
TSC2-216ENST00000497886 SCAF1Q9H7N4 1312 aaKnown RBP20.9■□□□□ 0.94
TSC2-216ENST00000497886 ABCC8Q09428 1581 aa20.88■□□□□ 0.93
TSC2-216ENST00000497886 CCDC88BA6NC98 1476 aa20.78■□□□□ 0.92
TSC2-216ENST00000497886 SOGA1O94964 1423 aa20.74■□□□□ 0.91
TSC2-216ENST00000497886 PELP1Q8IZL8 1130 aaKnown RBP20.73■□□□□ 0.91
TSC2-216ENST00000497886 HNRNPUL2Q1KMD3 747 aaKnown RBP20.69■□□□□ 0.9
TSC2-216ENST00000497886 DIEXFQ68CQ4 756 aaKnown RBP20.68■□□□□ 0.9
TSC2-216ENST00000497886 BAZ1AQ9NRL2 1556 aaPredicted RBP20.68■□□□□ 0.9
TSC2-216ENST00000497886 YTHDC1Q96MU7 727 aaKnown RBP20.66■□□□□ 0.9
TSC2-216ENST00000497886 RUSC2Q8N2Y8 1516 aa20.65■□□□□ 0.9
TSC2-216ENST00000497886 CEP162Q5TB80 1403 aa20.64■□□□□ 0.89
TSC2-216ENST00000497886 NEUROD1Q13562 356 aa20.64■□□□□ 0.89
TSC2-216ENST00000497886 CSRNP3Q8WYN3 585 aa20.64■□□□□ 0.89
TSC2-216ENST00000497886 ACIN1Q9UKV3 1341 aaKnown RBP20.53■□□□□ 0.88
TSC2-216ENST00000497886 GTF3C3Q9Y5Q9 886 aa20.51■□□□□ 0.87
TSC2-216ENST00000497886 TOP2AP11388 1531 aaKnown RBP20.51■□□□□ 0.87
TSC2-216ENST00000497886 SMARCA4P51532 1647 aa20.49■□□□□ 0.87
TSC2-216ENST00000497886 SMARCA2P51531 1590 aa20.48■□□□□ 0.87
TSC2-216ENST00000497886 EIF4G1Q04637 1599 aaKnown RBP20.46■□□□□ 0.87
TSC2-216ENST00000497886 APLP2Q06481 763 aa20.45■□□□□ 0.86
TSC2-216ENST00000497886 CENPBP07199 599 aaPredicted RBP20.43■□□□□ 0.86
TSC2-216ENST00000497886 TNIKQ9UKE5 1360 aa20.42■□□□□ 0.86
TSC2-216ENST00000497886 WRNQ14191 1432 aaPredicted RBP eCLIP20.35■□□□□ 0.85
TSC2-216ENST00000497886 ZNF316A6NFI3 1004 aaPredicted RBP20.34■□□□□ 0.85
TSC2-216ENST00000497886 UNC13AQ9UPW8 1703 aa20.31■□□□□ 0.84
TSC2-216ENST00000497886 GOLGA3Q08378 1498 aa20.3■□□□□ 0.84
TSC2-216ENST00000497886 MIER1Q8N108 512 aa20.25■□□□□ 0.83
TSC2-216ENST00000497886 ITGAEP38570 1179 aa20.25■□□□□ 0.83
TSC2-216ENST00000497886 CLIP1P30622 1438 aa20.24■□□□□ 0.83
TSC2-216ENST00000497886 EEA1Q15075 1411 aa20.19■□□□□ 0.82
TSC2-216ENST00000497886 SYNJ1O43426 1573 aa20.16■□□□□ 0.82
TSC2-216ENST00000497886 RAPGEF2Q9Y4G8 1499 aa20.14■□□□□ 0.81
TSC2-216ENST00000497886 CEP164Q9UPV0 1460 aa20.12■□□□□ 0.81
TSC2-216ENST00000497886 BAZ1BQ9UIG0 1483 aaKnown RBP20.09■□□□□ 0.81
TSC2-216ENST00000497886 BICRAQ9NZM4 1560 aa20.08■□□□□ 0.8
TSC2-216ENST00000497886 KANK4Q5T7N3 995 aaPredicted RBP20.03■□□□□ 0.8
TSC2-216ENST00000497886 VPS8Q8N3P4 1428 aa20.02■□□□□ 0.8
TSC2-216ENST00000497886 ATAD2BQ9ULI0 1458 aa20.02■□□□□ 0.8
TSC2-216ENST00000497886 ATP1B4Q9UN42 357 aaPredicted RBP20.01■□□□□ 0.79
TSC2-216ENST00000497886 P3H3Q8IVL6 736 aa19.89■□□□□ 0.78
TSC2-216ENST00000497886 KIF21BO75037 1637 aa19.89■□□□□ 0.77
TSC2-216ENST00000497886 MYT1Q01538 1121 aa19.85■□□□□ 0.77
TSC2-216ENST00000497886 FAM50AQ14320 339 aaKnown RBP19.78■□□□□ 0.76
TSC2-216ENST00000497886 DHX57Q6P158 1386 aaKnown RBP19.77■□□□□ 0.76
TSC2-216ENST00000497886 PEG3Q9GZU2 1588 aa19.76■□□□□ 0.75
TSC2-216ENST00000497886 HIRIP3Q9BW71 556 aaPredicted RBP19.75■□□□□ 0.75
TSC2-216ENST00000497886 ARAP1Q96P48 1450 aa19.74■□□□□ 0.75
TSC2-216ENST00000497886 KCNH8Q96L42 1107 aa19.71■□□□□ 0.75
TSC2-216ENST00000497886 TOP2BQ02880 1626 aa19.7■□□□□ 0.74
TSC2-216ENST00000497886 KIF27Q86VH2 1401 aa19.68■□□□□ 0.74
TSC2-216ENST00000497886 BCANQ96GW7 911 aa19.68■□□□□ 0.74
TSC2-216ENST00000497886 SIN3AQ96ST3 1273 aa19.66■□□□□ 0.74
TSC2-216ENST00000497886 CUX1P39880 1505 aa19.64■□□□□ 0.74
TSC2-216ENST00000497886 PRXQ9BXM0 1461 aa19.63■□□□□ 0.73
TSC2-216ENST00000497886 CCNB3Q8WWL7 1395 aa19.63■□□□□ 0.73
TSC2-216ENST00000497886 DDX10Q13206 875 aaKnown RBP19.61■□□□□ 0.73
TSC2-216ENST00000497886 CUX2O14529 1486 aa19.59■□□□□ 0.73
TSC2-216ENST00000497886 RAB3GAP2Q9H2M9 1393 aa19.56■□□□□ 0.72
TSC2-216ENST00000497886 ARHGAP35Q9NRY4 1499 aa19.55■□□□□ 0.72
TSC2-216ENST00000497886 SUPT16HQ9Y5B9 1047 aaKnown RBP19.55■□□□□ 0.72
TSC2-216ENST00000497886 ERICH3Q5RHP9 1530 aa19.51■□□□□ 0.71
TSC2-216ENST00000497886 BIVM-ERCC5R4GMW8 1640 aa19.51■□□□□ 0.71
TSC2-216ENST00000497886 CLSPNQ9HAW4 1339 aa19.49■□□□□ 0.71
TSC2-216ENST00000497886 CARMIL1Q5VZK9 1371 aa19.47■□□□□ 0.71
TSC2-216ENST00000497886 IGF1RP08069 1367 aa19.46■□□□□ 0.71
TSC2-216ENST00000497886 RRBP1Q9P2E9 1410 aaKnown RBP19.46■□□□□ 0.71
TSC2-216ENST00000497886 TRIM52Q96A61 297 aa19.44■□□□□ 0.7
TSC2-216ENST00000497886 NCAPD3P42695 1498 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms