RNA–Protein interactions for RNA: ENST00000497015.5

SRSF4-205, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-205ENST00000497015 ADAMTS12P58397 1594 aa17.94■□□□□ 0.46
SRSF4-205ENST00000497015 FHAD1B1AJZ9 1412 aa17.91■□□□□ 0.46
SRSF4-205ENST00000497015 WRNQ14191 1432 aaPredicted RBP eCLIP17.87■□□□□ 0.45
SRSF4-205ENST00000497015 DIP2BQ9P265 1576 aa17.83■□□□□ 0.45
SRSF4-205ENST00000497015 NPM1P06748 294 aaKnown RBP eCLIP17.83■□□□□ 0.44
SRSF4-205ENST00000497015 MAPKBP1O60336 1514 aa17.82■□□□□ 0.44
SRSF4-205ENST00000497015 KDM6BO15054 1643 aa17.79■□□□□ 0.44
SRSF4-205ENST00000497015 ERICH3Q5RHP9 1530 aa17.78■□□□□ 0.44
SRSF4-205ENST00000497015 ADCY10Q96PN6 1610 aa17.78■□□□□ 0.44
SRSF4-205ENST00000497015 TOP2BQ02880 1626 aa17.72■□□□□ 0.43
SRSF4-205ENST00000497015 TSPOAP1O95153 1857 aa17.71■□□□□ 0.43
SRSF4-205ENST00000497015 BIVM-ERCC5R4GMW8 1640 aa17.71■□□□□ 0.43
SRSF4-205ENST00000497015 RUSC2Q8N2Y8 1516 aa17.7■□□□□ 0.42
SRSF4-205ENST00000497015 COL17A1Q9UMD9 1497 aaPredicted RBP17.66■□□□□ 0.42
SRSF4-205ENST00000497015 ADGRL1O94910 1474 aa17.65■□□□□ 0.42
SRSF4-205ENST00000497015 SENP3Q9H4L4 574 aaPredicted RBP17.65■□□□□ 0.42
SRSF4-205ENST00000497015 KIAA0586Q9BVV6 1533 aa17.62■□□□□ 0.41
SRSF4-205ENST00000497015 PPRC1Q5VV67 1664 aaKnown RBP17.6■□□□□ 0.41
SRSF4-205ENST00000497015 HECW2Q9P2P5 1572 aa17.58■□□□□ 0.41
SRSF4-205ENST00000497015 PTPRGP23470 1445 aa17.58■□□□□ 0.41
SRSF4-205ENST00000497015 IGF1RP08069 1367 aa17.58■□□□□ 0.4
SRSF4-205ENST00000497015 TTBK1Q5TCY1 1321 aaPredicted RBP17.58■□□□□ 0.4
SRSF4-205ENST00000497015 SUPT5HO00267 1087 aaKnown RBP17.58■□□□□ 0.4
SRSF4-205ENST00000497015 ASXL2Q76L83 1435 aa17.55■□□□□ 0.4
SRSF4-205ENST00000497015 GLI2P10070 1586 aa17.53■□□□□ 0.4
SRSF4-205ENST00000497015 ABCC2Q92887 1545 aa17.52■□□□□ 0.4
SRSF4-205ENST00000497015 PLB1Q6P1J6 1458 aa17.5■□□□□ 0.39
SRSF4-205ENST00000497015 TNIKQ9UKE5 1360 aa17.48■□□□□ 0.39
SRSF4-205ENST00000497015 FBXO41Q8TF61 875 aa17.45■□□□□ 0.38
SRSF4-205ENST00000497015 EPRSP07814 1512 aaKnown RBP17.44■□□□□ 0.38
SRSF4-205ENST00000497015 UHRF1BP1LA0JNW5 1464 aa17.44■□□□□ 0.38
SRSF4-205ENST00000497015 UACAQ9BZF9 1416 aa17.41■□□□□ 0.38
SRSF4-205ENST00000497015 MAP3K4Q9Y6R4 1608 aa17.4■□□□□ 0.38
SRSF4-205ENST00000497015 CUL7Q14999 1698 aa17.4■□□□□ 0.38
SRSF4-205ENST00000497015 CARMIL1Q5VZK9 1371 aa17.39■□□□□ 0.37
SRSF4-205ENST00000497015 CARMIL2Q6F5E8 1435 aa17.38■□□□□ 0.37
SRSF4-205ENST00000497015 KDM5BQ9UGL1 1544 aa17.38■□□□□ 0.37
SRSF4-205ENST00000497015 KIF27Q86VH2 1401 aa17.37■□□□□ 0.37
SRSF4-205ENST00000497015 DISP1Q96F81 1524 aa17.37■□□□□ 0.37
SRSF4-205ENST00000497015 TEX14Q8IWB6 1497 aa17.33■□□□□ 0.37
SRSF4-205ENST00000497015 ZCCHC11Q5TAX3 1644 aaKnown RBP17.29■□□□□ 0.36
SRSF4-205ENST00000497015 IQGAP2Q13576 1575 aa17.28■□□□□ 0.36
SRSF4-205ENST00000497015 CD109Q6YHK3 1445 aa17.25■□□□□ 0.35
SRSF4-205ENST00000497015 KCNH8Q96L42 1107 aa17.25■□□□□ 0.35
SRSF4-205ENST00000497015 WDR7Q9Y4E6 1490 aa17.24■□□□□ 0.35
SRSF4-205ENST00000497015 MAGI3Q5TCQ9 1506 aa17.23■□□□□ 0.35
SRSF4-205ENST00000497015 UGGT2Q9NYU1 1516 aa17.21■□□□□ 0.35
SRSF4-205ENST00000497015 KIF21BO75037 1637 aa17.19■□□□□ 0.34
SRSF4-205ENST00000497015 EHMT2Q96KQ7 1210 aa17.18■□□□□ 0.34
SRSF4-205ENST00000497015 PTPRMP28827 1452 aa17.18■□□□□ 0.34
SRSF4-205ENST00000497015 KIAA0556O60303 1618 aa17.15■□□□□ 0.34
SRSF4-205ENST00000497015 ADAMTSL3P82987 1691 aa17.13■□□□□ 0.33
SRSF4-205ENST00000497015 ARAP3Q8WWN8 1544 aa17.13■□□□□ 0.33
SRSF4-205ENST00000497015 CFAP43Q8NDM7 1665 aa17.11■□□□□ 0.33
SRSF4-205ENST00000497015 RAPGEF3O95398 923 aa17.11■□□□□ 0.33
SRSF4-205ENST00000497015 RAPGEF2Q9Y4G8 1499 aa17.11■□□□□ 0.33
SRSF4-205ENST00000497015 ILDR2Q71H61 639 aa17.1■□□□□ 0.33
SRSF4-205ENST00000497015 LMTK3Q96Q04 1460 aa17.09■□□□□ 0.33
SRSF4-205ENST00000497015 ABCA8O94911 1581 aa17.09■□□□□ 0.33
SRSF4-205ENST00000497015 HSPA2P54652 639 aa17.07■□□□□ 0.32
SRSF4-205ENST00000497015 ARID3CA6NKF2 412 aa17.05■□□□□ 0.32
SRSF4-205ENST00000497015 PCF11O94913 1555 aaKnown RBP17.05■□□□□ 0.32
SRSF4-205ENST00000497015 CERKQ8TCT0 537 aa17.03■□□□□ 0.32
SRSF4-205ENST00000497015 ATP10BO94823 1461 aa17.01■□□□□ 0.31
SRSF4-205ENST00000497015 MADDQ8WXG6 1647 aa16.99■□□□□ 0.31
SRSF4-205ENST00000497015 BCORL1Q5H9F3 1711 aa16.99■□□□□ 0.31
SRSF4-205ENST00000497015 ARID4BQ4LE39 1312 aaPredicted RBP16.98■□□□□ 0.31
SRSF4-205ENST00000497015 PHLDB1Q86UU1 1377 aa16.98■□□□□ 0.31
SRSF4-205ENST00000497015 SOCS7O14512 581 aa16.97■□□□□ 0.31
SRSF4-205ENST00000497015 FRMPD1Q5SYB0 1578 aa16.95■□□□□ 0.3
SRSF4-205ENST00000497015 P3H3Q8IVL6 736 aa16.95■□□□□ 0.3
SRSF4-205ENST00000497015 GOLGA3Q08378 1498 aa16.94■□□□□ 0.3
SRSF4-205ENST00000497015 ABCA9Q8IUA7 1624 aa16.93■□□□□ 0.3
SRSF4-205ENST00000497015 KCNA4P22459 653 aa16.92■□□□□ 0.3
SRSF4-205ENST00000497015 DISP3Q9P2K9 1392 aa16.91■□□□□ 0.3
SRSF4-205ENST00000497015 NEO1Q92859 1461 aa16.91■□□□□ 0.3
SRSF4-205ENST00000497015 RIMS1Q86UR5 1692 aaKnown RBP16.88■□□□□ 0.29
SRSF4-205ENST00000497015 CTTNBP2Q8WZ74 1663 aa16.88■□□□□ 0.29
SRSF4-205ENST00000497015 SIGLEC1Q9BZZ2 1709 aa16.86■□□□□ 0.29
SRSF4-205ENST00000497015 PRXQ9BXM0 1461 aa16.83■□□□□ 0.28
SRSF4-205ENST00000497015 YEATS2Q9ULM3 1422 aa16.82■□□□□ 0.28
SRSF4-205ENST00000497015 DENND4BO75064 1496 aaPredicted RBP16.81■□□□□ 0.28
SRSF4-205ENST00000497015 FHOD3Q2V2M9 1422 aa16.81■□□□□ 0.28
SRSF4-205ENST00000497015 MLECQ14165 292 aa16.81■□□□□ 0.28
SRSF4-205ENST00000497015 ARHGEF40Q8TER5 1519 aa16.8■□□□□ 0.28
SRSF4-205ENST00000497015 AKNAQ7Z591 1439 aa16.8■□□□□ 0.28
SRSF4-205ENST00000497015 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.8■□□□□ 0.28
SRSF4-205ENST00000497015 HNRNPUL2Q1KMD3 747 aaKnown RBP16.8■□□□□ 0.28
SRSF4-205ENST00000497015 CEBPAP49715 358 aaPredicted RBP16.79■□□□□ 0.28
SRSF4-205ENST00000497015 RICTORQ6R327 1708 aa16.79■□□□□ 0.28
SRSF4-205ENST00000497015 NUP153P49790 1475 aaKnown RBP16.75■□□□□ 0.27
SRSF4-205ENST00000497015 POGZQ7Z3K3 1410 aa16.74■□□□□ 0.27
SRSF4-205ENST00000497015 FAM9AQ8IZU1 332 aaPredicted RBP16.73■□□□□ 0.27
SRSF4-205ENST00000497015 RAPGEF6Q8TEU7 1601 aa16.73■□□□□ 0.27
SRSF4-205ENST00000497015 FANCAO15360 1455 aa16.73■□□□□ 0.27
SRSF4-205ENST00000497015 STRCQ7RTU9 1775 aa16.72■□□□□ 0.27
SRSF4-205ENST00000497015 PLEKHD1A6NEE1 506 aa16.72■□□□□ 0.27
SRSF4-205ENST00000497015 ZMYM4Q5VZL5 1548 aa16.71■□□□□ 0.27
SRSF4-205ENST00000497015 ADRA2BP18089 450 aa16.71■□□□□ 0.27
SRSF4-205ENST00000497015 TTC37Q6PGP7 1564 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms