RNA–Protein interactions for RNA: ENST00000497002.1

PLS1-211, Transcript of plastin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLS1, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLS1-211ENST00000497002 SHROOM4Q9ULL8 1493 aa8.35□□□□□ -1.07
PLS1-211ENST00000497002 BRPF1P55201 1214 aaPredicted RBP8.33□□□□□ -1.08
PLS1-211ENST00000497002 IFNLR1Q8IU57 520 aaPredicted RBP8.33□□□□□ -1.08
PLS1-211ENST00000497002 MYCNP04198 464 aaPredicted RBP8.32□□□□□ -1.08
PLS1-211ENST00000497002 DHX37Q8IY37 1157 aaKnown RBP8.32□□□□□ -1.08
PLS1-211ENST00000497002 DNAJC5Q9H3Z4 198 aa8.32□□□□□ -1.08
PLS1-211ENST00000497002 SPRYD3Q8NCJ5 442 aa8.31□□□□□ -1.08
PLS1-211ENST00000497002 C1orf115Q9H7X2 142 aa8.31□□□□□ -1.08
PLS1-211ENST00000497002 POLA2Q14181 598 aa8.29□□□□□ -1.08
PLS1-211ENST00000497002 ATF5Q9Y2D1 282 aaPredicted RBP8.29□□□□□ -1.08
PLS1-211ENST00000497002 ZBTB7CA1YPR0 619 aa8.24□□□□□ -1.09
PLS1-211ENST00000497002 UBE2Q2Q8WVN8 375 aa8.23□□□□□ -1.09
PLS1-211ENST00000497002 VASPP50552 380 aaPredicted RBP8.22□□□□□ -1.09
PLS1-211ENST00000497002 HSP90B1P14625 803 aaKnown RBP8.22□□□□□ -1.09
PLS1-211ENST00000497002 ZNF428Q96B54 188 aa8.22□□□□□ -1.09
PLS1-211ENST00000497002 ARID3CA6NKF2 412 aa8.19□□□□□ -1.1
PLS1-211ENST00000497002 ZMYND15Q9H091 742 aa8.18□□□□□ -1.1
PLS1-211ENST00000497002 RSPH6AQ9H0K4 717 aa8.15□□□□□ -1.1
PLS1-211ENST00000497002 BRD2P25440 801 aaKnown RBP8.15□□□□□ -1.1
PLS1-211ENST00000497002 RBM42Q9BTD8 480 aaKnown RBP8.15□□□□□ -1.1
PLS1-211ENST00000497002 NEUROD2Q15784 382 aa8.14□□□□□ -1.11
PLS1-211ENST00000497002 BCL11AQ9H165 835 aa8.14□□□□□ -1.11
PLS1-211ENST00000497002 RGL2O15211 777 aa8.13□□□□□ -1.11
PLS1-211ENST00000497002 ATXN8OSP0DMR3 200 aa8.13□□□□□ -1.11
PLS1-211ENST00000497002 PUS7Q96PZ0 661 aaKnown RBP8.13□□□□□ -1.11
PLS1-211ENST00000497002 HMGB1P09429 215 aaKnown RBP8.12□□□□□ -1.11
PLS1-211ENST00000497002 FAM9AQ8IZU1 332 aaPredicted RBP8.12□□□□□ -1.11
PLS1-211ENST00000497002 ECM2O94769 699 aaPredicted RBP8.12□□□□□ -1.11
PLS1-211ENST00000497002 KCTD17Q8N5Z5 321 aa8.11□□□□□ -1.11
PLS1-211ENST00000497002 RAD21O60216 631 aa8.1□□□□□ -1.11
PLS1-211ENST00000497002 PDE4CQ08493 712 aa8.1□□□□□ -1.11
PLS1-211ENST00000497002 CHRDL2Q6WN34 429 aa8.09□□□□□ -1.11
PLS1-211ENST00000497002 MTMR7Q9Y216 660 aa8.08□□□□□ -1.12
PLS1-211ENST00000497002 FOXD4L5Q5VV16 416 aaPredicted RBP8.08□□□□□ -1.12
PLS1-211ENST00000497002 FOXD4L4Q8WXT5 416 aaPredicted RBP8.08□□□□□ -1.12
PLS1-211ENST00000497002 RGS22Q8NE09 1264 aa8.07□□□□□ -1.12
PLS1-211ENST00000497002 POLR3GLQ9BT43 218 aa8.06□□□□□ -1.12
PLS1-211ENST00000497002 OSCARQ8IYS5 282 aa8.05□□□□□ -1.12
PLS1-211ENST00000497002 APBB1O00213 710 aa8.04□□□□□ -1.12
PLS1-211ENST00000497002 CHGAP10645 457 aaKnown RBP8.04□□□□□ -1.12
PLS1-211ENST00000497002 RBM25P49756 843 aaKnown RBP8.04□□□□□ -1.12
PLS1-211ENST00000497002 LMOD2Q6P5Q4 547 aa8.03□□□□□ -1.12
PLS1-211ENST00000497002 TAF7LQ5H9L4 462 aa8□□□□□ -1.13
PLS1-211ENST00000497002 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8□□□□□ -1.13
PLS1-211ENST00000497002 AKT1S1Q96B36 256 aa7.98□□□□□ -1.13
PLS1-211ENST00000497002 SLC24A3Q9HC58 644 aa7.98□□□□□ -1.13
PLS1-211ENST00000497002 REM2Q8IYK8 340 aaPredicted RBP7.96□□□□□ -1.13
PLS1-211ENST00000497002 ZBTB12Q9Y330 459 aaPredicted RBP7.96□□□□□ -1.13
PLS1-211ENST00000497002 ZNF692Q9BU19 519 aaPredicted RBP7.95□□□□□ -1.14
PLS1-211ENST00000497002 AEBP1Q8IUX7 1158 aa7.95□□□□□ -1.14
PLS1-211ENST00000497002 USP35Q9P2H5 1018 aa7.93□□□□□ -1.14
PLS1-211ENST00000497002 CCDC82Q8N4S0 544 aa7.92□□□□□ -1.14
PLS1-211ENST00000497002 BCL11BQ9C0K0 894 aaPredicted RBP7.92□□□□□ -1.14
PLS1-211ENST00000497002 IRX6P78412 446 aaPredicted RBP7.91□□□□□ -1.14
PLS1-211ENST00000497002 PITPNM1O00562 1244 aa7.9□□□□□ -1.14
PLS1-211ENST00000497002 FAM177A1Q8N128 213 aaPredicted RBP7.9□□□□□ -1.14
PLS1-211ENST00000497002 PIP4P2Q8N4L2 257 aa7.9□□□□□ -1.14
PLS1-211ENST00000497002 MFAP1P55081 439 aaKnown RBP7.9□□□□□ -1.15
PLS1-211ENST00000497002 MKRN3Q13064 507 aaKnown RBP7.89□□□□□ -1.15
PLS1-211ENST00000497002 ZC3H15Q8WU90 426 aaKnown RBP7.89□□□□□ -1.15
PLS1-211ENST00000497002 SPDYE4A6NLX3 237 aa7.88□□□□□ -1.15
PLS1-211ENST00000497002 MKRN4PQ13434 485 aaPredicted RBP7.87□□□□□ -1.15
PLS1-211ENST00000497002 BRPF3Q9ULD4 1205 aa7.87□□□□□ -1.15
PLS1-211ENST00000497002 TMCO4Q5TGY1 634 aa7.86□□□□□ -1.15
PLS1-211ENST00000497002 PROM2Q8N271 834 aa7.86□□□□□ -1.15
PLS1-211ENST00000497002 IL27Q8NEV9 243 aa7.86□□□□□ -1.15
PLS1-211ENST00000497002 GPBP1L1Q9HC44 474 aaPredicted RBP7.86□□□□□ -1.15
PLS1-211ENST00000497002 CWC22Q9HCG8 908 aaKnown RBP7.86□□□□□ -1.15
PLS1-211ENST00000497002 NKX1-1Q15270 411 aaPredicted RBP7.85□□□□□ -1.15
PLS1-211ENST00000497002 GZF1Q9H116 711 aaPredicted RBP7.85□□□□□ -1.15
PLS1-211ENST00000497002 NEFLP07196 543 aa7.84□□□□□ -1.15
PLS1-211ENST00000497002 ZFP91Q96JP5 570 aaPredicted RBP7.83□□□□□ -1.16
PLS1-211ENST00000497002 FXR2P51116 673 aaKnown RBP eCLIP7.82□□□□□ -1.16
PLS1-211ENST00000497002 SP7Q8TDD2 431 aaPredicted RBP7.81□□□□□ -1.16
PLS1-211ENST00000497002 SPOCK2Q92563 424 aa7.81□□□□□ -1.16
PLS1-211ENST00000497002 ZNF592Q92610 1267 aa7.81□□□□□ -1.16
PLS1-211ENST00000497002 TMED8Q6PL24 325 aaPredicted RBP7.8□□□□□ -1.16
PLS1-211ENST00000497002 KCNV2Q8TDN2 545 aa7.8□□□□□ -1.16
PLS1-211ENST00000497002 E9PSI1 815 aa7.8□□□□□ -1.16
PLS1-211ENST00000497002 PPM1GO15355 546 aaPredicted RBP7.8□□□□□ -1.16
PLS1-211ENST00000497002 TRAIPQ9BWF2 469 aa7.8□□□□□ -1.16
PLS1-211ENST00000497002 SPDYE2BA6NHP3 402 aa7.78□□□□□ -1.16
PLS1-211ENST00000497002 SPDYE6P0CI01 402 aa7.78□□□□□ -1.16
PLS1-211ENST00000497002 SPDYE2Q495Y8 402 aa7.78□□□□□ -1.16
PLS1-211ENST00000497002 CERS3Q8IU89 383 aa7.78□□□□□ -1.16
PLS1-211ENST00000497002 GTPBP6O43824 516 aaPredicted RBP7.78□□□□□ -1.16
PLS1-211ENST00000497002 EVX2Q03828 476 aa7.77□□□□□ -1.17
PLS1-211ENST00000497002 CCDC136Q96JN2 1154 aa7.77□□□□□ -1.17
PLS1-211ENST00000497002 BCCIPQ9P287 314 aaKnown RBP eCLIP7.76□□□□□ -1.17
PLS1-211ENST00000497002 HAX1O00165 279 aa7.76□□□□□ -1.17
PLS1-211ENST00000497002 HS6ST3Q8IZP7 471 aa7.75□□□□□ -1.17
PLS1-211ENST00000497002 CLUAP1Q96AJ1 413 aa7.75□□□□□ -1.17
PLS1-211ENST00000497002 PKNOX2Q96KN3 472 aa7.75□□□□□ -1.17
PLS1-211ENST00000497002 WDR70Q9NW82 654 aa7.75□□□□□ -1.17
PLS1-211ENST00000497002 IRF5Q13568 498 aa7.73□□□□□ -1.17
PLS1-211ENST00000497002 TRIM41Q8WV44 630 aa7.73□□□□□ -1.17
PLS1-211ENST00000497002 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.73□□□□□ -1.17
PLS1-211ENST00000497002 ZNF316A6NFI3 1004 aaPredicted RBP7.73□□□□□ -1.17
PLS1-211ENST00000497002 A0A0U1RQG5 324 aaPredicted RBP7.72□□□□□ -1.17
PLS1-211ENST00000497002 CLEC11AQ9Y240 323 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms