RNA–Protein interactions for RNA: ENST00000496722.1

UBE2L3-203, Transcript of ubiquitin conjugating enzyme E2 L3, humanhuman

TSL 2

Gene UBE2L3, Length 3,451 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2L3-203ENST00000496722 CARMIL1Q5VZK9 1371 aa20.37■□□□□ 0.85
UBE2L3-203ENST00000496722 HMGXB3Q12766 1538 aa20.36■□□□□ 0.85
UBE2L3-203ENST00000496722 SETD5Q9C0A6 1442 aa20.31■□□□□ 0.84
UBE2L3-203ENST00000496722 WDR97A6NE52 1622 aa20.31■□□□□ 0.84
UBE2L3-203ENST00000496722 FGD5Q6ZNL6 1462 aa20.3■□□□□ 0.84
UBE2L3-203ENST00000496722 TIAM1Q13009 1591 aa20.3■□□□□ 0.84
UBE2L3-203ENST00000496722 LRRC9Q6ZRR7 1453 aa20.28■□□□□ 0.84
UBE2L3-203ENST00000496722 TSHZ2Q9NRE2 1034 aa20.28■□□□□ 0.84
UBE2L3-203ENST00000496722 FHOD3Q2V2M9 1422 aa20.27■□□□□ 0.84
UBE2L3-203ENST00000496722 TRIM52Q96A61 297 aa20.26■□□□□ 0.83
UBE2L3-203ENST00000496722 FKBP8Q14318 412 aa20.23■□□□□ 0.83
UBE2L3-203ENST00000496722 CADPSQ9ULU8 1353 aa20.23■□□□□ 0.83
UBE2L3-203ENST00000496722 RAD54L2Q9Y4B4 1467 aa20.22■□□□□ 0.83
UBE2L3-203ENST00000496722 PCF11O94913 1555 aaKnown RBP20.18■□□□□ 0.82
UBE2L3-203ENST00000496722 PPP1R15AO75807 674 aaPredicted RBP20.17■□□□□ 0.82
UBE2L3-203ENST00000496722 MYT1Q01538 1121 aa20.15■□□□□ 0.82
UBE2L3-203ENST00000496722 FHAD1B1AJZ9 1412 aa20.1■□□□□ 0.81
UBE2L3-203ENST00000496722 NESP48681 1621 aa20.08■□□□□ 0.8
UBE2L3-203ENST00000496722 FANCD2Q9BXW9 1451 aa20.08■□□□□ 0.8
UBE2L3-203ENST00000496722 ARID3CA6NKF2 412 aa20.07■□□□□ 0.8
UBE2L3-203ENST00000496722 MAP3K1Q13233 1512 aa20.06■□□□□ 0.8
UBE2L3-203ENST00000496722 ANP32CO43423 234 aa20.06■□□□□ 0.8
UBE2L3-203ENST00000496722 CHIC2Q9UKJ5 165 aa20.05■□□□□ 0.8
UBE2L3-203ENST00000496722 PTPRKQ15262 1439 aa20.04■□□□□ 0.8
UBE2L3-203ENST00000496722 TONSLQ96HA7 1378 aa20.03■□□□□ 0.8
UBE2L3-203ENST00000496722 IRX6P78412 446 aaPredicted RBP20.01■□□□□ 0.79
UBE2L3-203ENST00000496722 TDRD9Q8NDG6 1382 aaKnown RBP20.01■□□□□ 0.79
UBE2L3-203ENST00000496722 RRP7BPQ9NSQ0 103 aa20.01■□□□□ 0.79
UBE2L3-203ENST00000496722 PRDM2Q13029 1718 aa20.01■□□□□ 0.79
UBE2L3-203ENST00000496722 MTUS2Q5JR59 1369 aa20.01■□□□□ 0.79
UBE2L3-203ENST00000496722 CFAP43Q8NDM7 1665 aa20■□□□□ 0.79
UBE2L3-203ENST00000496722 POLA1P09884 1462 aaPredicted RBP19.99■□□□□ 0.79
UBE2L3-203ENST00000496722 FGD6Q6ZV73 1430 aa19.97■□□□□ 0.79
UBE2L3-203ENST00000496722 CC2D2AQ9P2K1 1620 aa19.96■□□□□ 0.79
UBE2L3-203ENST00000496722 CASKIN1Q8WXD9 1431 aa19.96■□□□□ 0.79
UBE2L3-203ENST00000496722 DNAJC5BQ9UF47 199 aa19.95■□□□□ 0.78
UBE2L3-203ENST00000496722 AQRO60306 1485 aaKnown RBP eCLIP19.95■□□□□ 0.784e-7■■■■■ 32.3
UBE2L3-203ENST00000496722 CCDC18Q5T9S5 1454 aa19.95■□□□□ 0.78
UBE2L3-203ENST00000496722 NEFLP07196 543 aa19.95■□□□□ 0.78
UBE2L3-203ENST00000496722 FYCO1Q9BQS8 1478 aa19.94■□□□□ 0.78
UBE2L3-203ENST00000496722 TOPBP1Q92547 1522 aa19.94■□□□□ 0.78
UBE2L3-203ENST00000496722 FOXD1Q16676 465 aa19.94■□□□□ 0.78
UBE2L3-203ENST00000496722 HNRNPUQ00839 825 aaKnown RBP eCLIP19.9■□□□□ 0.78
UBE2L3-203ENST00000496722 TIMELESSQ9UNS1 1208 aa19.9■□□□□ 0.78
UBE2L3-203ENST00000496722 ABCA10Q8WWZ4 1543 aa19.89■□□□□ 0.78
UBE2L3-203ENST00000496722 CCER2I3L3R5 266 aa19.88■□□□□ 0.77
UBE2L3-203ENST00000496722 ANP32EQ9BTT0 268 aa19.88■□□□□ 0.77
UBE2L3-203ENST00000496722 CNGB1Q14028 1251 aaPredicted RBP19.88■□□□□ 0.77
UBE2L3-203ENST00000496722 RBM19Q9Y4C8 960 aaKnown RBP19.87■□□□□ 0.77
UBE2L3-203ENST00000496722 DNMBPQ6XZF7 1577 aa19.86■□□□□ 0.77
UBE2L3-203ENST00000496722 SNAPC4Q5SXM2 1469 aa19.86■□□□□ 0.77
UBE2L3-203ENST00000496722 CCDC184Q52MB2 194 aa19.86■□□□□ 0.77
UBE2L3-203ENST00000496722 NAIPQ13075 1403 aa19.85■□□□□ 0.77
UBE2L3-203ENST00000496722 FMN1Q68DA7 1419 aa19.84■□□□□ 0.77
UBE2L3-203ENST00000496722 NCOA2Q15596 1464 aa19.84■□□□□ 0.77
UBE2L3-203ENST00000496722 HSPA5P11021 654 aaKnown RBP19.84■□□□□ 0.77
UBE2L3-203ENST00000496722 UACAQ9BZF9 1416 aa19.83■□□□□ 0.76
UBE2L3-203ENST00000496722 HFM1A2PYH4 1435 aa19.83■□□□□ 0.76
UBE2L3-203ENST00000496722 PTPN23Q9H3S7 1636 aa19.81■□□□□ 0.76
UBE2L3-203ENST00000496722 WASHC2AQ641Q2 1341 aa19.81■□□□□ 0.76
UBE2L3-203ENST00000496722 EFCAB5A4FU69 1503 aa19.81■□□□□ 0.76
UBE2L3-203ENST00000496722 LRRIQ1Q96JM4 1722 aa19.81■□□□□ 0.76
UBE2L3-203ENST00000496722 URB2Q14146 1524 aaKnown RBP19.79■□□□□ 0.76
UBE2L3-203ENST00000496722 SENP3-EIF4A1A0A087X0R7 540 aa19.79■□□□□ 0.76
UBE2L3-203ENST00000496722 CTTNBP2Q8WZ74 1663 aa19.79■□□□□ 0.76
UBE2L3-203ENST00000496722 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.79■□□□□ 0.762e-7■□□□□ 9.7
UBE2L3-203ENST00000496722 MYOM3Q5VTT5 1437 aa19.79■□□□□ 0.76
UBE2L3-203ENST00000496722 C11orf95C9JLR9 678 aaPredicted RBP19.78■□□□□ 0.76
UBE2L3-203ENST00000496722 MAGI3Q5TCQ9 1506 aa19.75■□□□□ 0.75
UBE2L3-203ENST00000496722 FAM9BQ8IZU0 186 aa19.74■□□□□ 0.75
UBE2L3-203ENST00000496722 KDM5BQ9UGL1 1544 aa19.73■□□□□ 0.75
UBE2L3-203ENST00000496722 L3MBTL2Q969R5 705 aa19.73■□□□□ 0.75
UBE2L3-203ENST00000496722 GAPVD1Q14C86 1478 aa19.73■□□□□ 0.75
UBE2L3-203ENST00000496722 CUL7Q14999 1698 aa19.72■□□□□ 0.75
UBE2L3-203ENST00000496722 KDM6BO15054 1643 aa19.72■□□□□ 0.75
UBE2L3-203ENST00000496722 GRIN2BQ13224 1484 aa19.71■□□□□ 0.75
UBE2L3-203ENST00000496722 DENND4BO75064 1496 aaPredicted RBP19.7■□□□□ 0.74
UBE2L3-203ENST00000496722 MPHOSPH9Q99550 1183 aa19.7■□□□□ 0.74
UBE2L3-203ENST00000496722 ZNF644Q9H582 1327 aaPredicted RBP19.68■□□□□ 0.74
UBE2L3-203ENST00000496722 MSH5O43196 834 aa19.68■□□□□ 0.74
UBE2L3-203ENST00000496722 EIF4G2P78344 907 aaKnown RBP eCLIP19.68■□□□□ 0.744e-8■■■□□ 19.2
UBE2L3-203ENST00000496722 POLR3GLQ9BT43 218 aa19.66■□□□□ 0.74
UBE2L3-203ENST00000496722 NBPF8Q3BBV2 869 aa19.66■□□□□ 0.74
UBE2L3-203ENST00000496722 CDK13Q14004 1512 aaKnown RBP19.66■□□□□ 0.74
UBE2L3-203ENST00000496722 SAMD9Q5K651 1589 aa19.65■□□□□ 0.74
UBE2L3-203ENST00000496722 SUPT6HQ7KZ85 1726 aaKnown RBP19.64■□□□□ 0.73
UBE2L3-203ENST00000496722 UGGT2Q9NYU1 1516 aa19.62■□□□□ 0.73
UBE2L3-203ENST00000496722 ZNF326Q5BKZ1 582 aaKnown RBP19.61■□□□□ 0.73
UBE2L3-203ENST00000496722 MRS2Q9HD23 443 aa19.61■□□□□ 0.73
UBE2L3-203ENST00000496722 EHBP1L1Q8N3D4 1523 aa19.6■□□□□ 0.73
UBE2L3-203ENST00000496722 ABCA5Q8WWZ7 1642 aa19.59■□□□□ 0.73
UBE2L3-203ENST00000496722 B4GALNT3Q6L9W6 998 aa19.59■□□□□ 0.73
UBE2L3-203ENST00000496722 PRKRIP1Q9H875 184 aaPredicted RBP19.57■□□□□ 0.72
UBE2L3-203ENST00000496722 LAMC3Q9Y6N6 1575 aa19.57■□□□□ 0.72
UBE2L3-203ENST00000496722 SLC4A1APQ9BWU0 796 aaKnown RBP19.56■□□□□ 0.72
UBE2L3-203ENST00000496722 CDK11AQ9UQ88 783 aaPredicted RBP19.55■□□□□ 0.72
UBE2L3-203ENST00000496722 EPRSP07814 1512 aaKnown RBP19.54■□□□□ 0.72
UBE2L3-203ENST00000496722 CCDC7Q96M83 1385 aa19.53■□□□□ 0.72
UBE2L3-203ENST00000496722 ZNF777Q9ULD5 760 aaPredicted RBP19.53■□□□□ 0.72
UBE2L3-203ENST00000496722 THOC2Q8NI27 1593 aaKnown RBP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms