RNA–Protein interactions for RNA: ENST00000495985.5

ERCC8-207, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-207ENST00000495985 TRIM41Q8WV44 630 aa9.77□□□□□ -0.85
ERCC8-207ENST00000495985 RNF25Q96BH1 459 aaPredicted RBP9.77□□□□□ -0.85
ERCC8-207ENST00000495985 FARP1Q9Y4F1 1045 aaPredicted RBP9.77□□□□□ -0.85
ERCC8-207ENST00000495985 PLCB2Q00722 1185 aa9.76□□□□□ -0.85
ERCC8-207ENST00000495985 PIP4P2Q8N4L2 257 aa9.73□□□□□ -0.85
ERCC8-207ENST00000495985 CHGAP10645 457 aaKnown RBP9.72□□□□□ -0.85
ERCC8-207ENST00000495985 PYGBP11216 843 aa9.72□□□□□ -0.85
ERCC8-207ENST00000495985 TSPYL2Q9H2G4 693 aaPredicted RBP9.72□□□□□ -0.85
ERCC8-207ENST00000495985 BBXQ8WY36 941 aaPredicted RBP9.71□□□□□ -0.86
ERCC8-207ENST00000495985 RIOK3O14730 519 aaKnown RBP9.67□□□□□ -0.86
ERCC8-207ENST00000495985 CHRM1P11229 460 aaPredicted RBP9.67□□□□□ -0.86
ERCC8-207ENST00000495985 HAP1P54257 671 aaPredicted RBP9.65□□□□□ -0.86
ERCC8-207ENST00000495985 PAXIP1Q6ZW49 1069 aaPredicted RBP9.65□□□□□ -0.86
ERCC8-207ENST00000495985 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.65□□□□□ -0.86
ERCC8-207ENST00000495985 CFAP44Q96MT7 982 aa9.64□□□□□ -0.87
ERCC8-207ENST00000495985 HAX1O00165 279 aa9.63□□□□□ -0.87
ERCC8-207ENST00000495985 HS6ST3Q8IZP7 471 aa9.62□□□□□ -0.87
ERCC8-207ENST00000495985 CCDC61Q9Y6R9 512 aa9.6□□□□□ -0.87
ERCC8-207ENST00000495985 STK25O00506 426 aa9.58□□□□□ -0.88
ERCC8-207ENST00000495985 VGFO15240 615 aaPredicted RBP9.58□□□□□ -0.88
ERCC8-207ENST00000495985 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.57□□□□□ -0.88
ERCC8-207ENST00000495985 SPRYD3Q8NCJ5 442 aa9.57□□□□□ -0.88
ERCC8-207ENST00000495985 ZFP91Q96JP5 570 aaPredicted RBP9.57□□□□□ -0.88
ERCC8-207ENST00000495985 TAOK2Q9UL54 1235 aa9.56□□□□□ -0.88
ERCC8-207ENST00000495985 PCDHB8Q9UN66 801 aa9.56□□□□□ -0.88
ERCC8-207ENST00000495985 PCDHB13Q9Y5F0 798 aa9.56□□□□□ -0.88
ERCC8-207ENST00000495985 NKX1-1Q15270 411 aaPredicted RBP9.55□□□□□ -0.88
ERCC8-207ENST00000495985 BCL11BQ9C0K0 894 aaPredicted RBP9.54□□□□□ -0.88
ERCC8-207ENST00000495985 PAK3O75914 559 aaPredicted RBP9.53□□□□□ -0.88
ERCC8-207ENST00000495985 STK24Q9Y6E0 443 aa9.53□□□□□ -0.88
ERCC8-207ENST00000495985 SGIP1Q9BQI5 828 aa9.52□□□□□ -0.89
ERCC8-207ENST00000495985 DNAJC5Q9H3Z4 198 aa9.52□□□□□ -0.89
ERCC8-207ENST00000495985 ZRANB1Q9UGI0 708 aa9.52□□□□□ -0.89
ERCC8-207ENST00000495985 CD44P16070 742 aaKnown RBP9.51□□□□□ -0.89
ERCC8-207ENST00000495985 ZNF467Q7Z7K2 595 aaPredicted RBP9.51□□□□□ -0.89
ERCC8-207ENST00000495985 MAP3K13O43283 966 aa9.5□□□□□ -0.89
ERCC8-207ENST00000495985 TSHZ2Q9NRE2 1034 aa9.5□□□□□ -0.89
ERCC8-207ENST00000495985 KIF12Q96FN5 646 aa9.49□□□□□ -0.89
ERCC8-207ENST00000495985 IFNL1Q8IU54 200 aa9.48□□□□□ -0.89
ERCC8-207ENST00000495985 GTPBP6O43824 516 aaPredicted RBP9.47□□□□□ -0.89
ERCC8-207ENST00000495985 ZNF579Q8NAF0 562 aaKnown RBP9.47□□□□□ -0.89
ERCC8-207ENST00000495985 PHF12Q96QT6 1004 aa9.47□□□□□ -0.89
ERCC8-207ENST00000495985 KDM2AQ9Y2K7 1162 aa9.47□□□□□ -0.89
ERCC8-207ENST00000495985 PDAP1Q13442 181 aaKnown RBP9.46□□□□□ -0.9
ERCC8-207ENST00000495985 VSIG10Q8N0Z9 540 aa9.46□□□□□ -0.9
ERCC8-207ENST00000495985 PSEN1P49768 467 aa9.45□□□□□ -0.9
ERCC8-207ENST00000495985 C19orf67A6NJJ6 358 aa9.43□□□□□ -0.9
ERCC8-207ENST00000495985 EVX2Q03828 476 aa9.36□□□□□ -0.91
ERCC8-207ENST00000495985 TRPC6Q9Y210 931 aa9.36□□□□□ -0.91
ERCC8-207ENST00000495985 MS4A3Q96HJ5 214 aa9.35□□□□□ -0.91
ERCC8-207ENST00000495985 CABP2Q9NPB3 220 aa9.35□□□□□ -0.91
ERCC8-207ENST00000495985 EFCAB3Q8N7B9 438 aa9.33□□□□□ -0.92
ERCC8-207ENST00000495985 MFRPQ9BY79 579 aa9.33□□□□□ -0.92
ERCC8-207ENST00000495985 RYDENQ9NUL5 291 aaKnown RBP9.31□□□□□ -0.92
ERCC8-207ENST00000495985 TMEM106CQ9BVX2 250 aa9.29□□□□□ -0.92
ERCC8-207ENST00000495985 PHF8Q9UPP1 1060 aa9.28□□□□□ -0.92
ERCC8-207ENST00000495985 GALR2O43603 387 aaPredicted RBP9.27□□□□□ -0.93
ERCC8-207ENST00000495985 PPP1R37O75864 691 aa9.26□□□□□ -0.93
ERCC8-207ENST00000495985 FBXO22Q8NEZ5 403 aa9.25□□□□□ -0.93
ERCC8-207ENST00000495985 SOX12O15370 315 aa9.24□□□□□ -0.93
ERCC8-207ENST00000495985 NLRP6P59044 892 aa9.24□□□□□ -0.93
ERCC8-207ENST00000495985 CADPS2Q86UW7 1296 aa9.23□□□□□ -0.93
ERCC8-207ENST00000495985 BCANQ96GW7 911 aa9.23□□□□□ -0.93
ERCC8-207ENST00000495985 TTLL13PA6NNM8 815 aa9.22□□□□□ -0.93
ERCC8-207ENST00000495985 TIE1P35590 1138 aa9.21□□□□□ -0.94
ERCC8-207ENST00000495985 GOLGA2Q08379 1002 aa9.21□□□□□ -0.94
ERCC8-207ENST00000495985 BMP2KQ9NSY1 1161 aaPredicted RBP9.21□□□□□ -0.94
ERCC8-207ENST00000495985 GABBR2O75899 941 aa9.2□□□□□ -0.94
ERCC8-207ENST00000495985 MS4A4AQ96JQ5 239 aa9.2□□□□□ -0.94
ERCC8-207ENST00000495985 MKRN3Q13064 507 aaKnown RBP9.17□□□□□ -0.94
ERCC8-207ENST00000495985 LHX8Q68G74 356 aa9.17□□□□□ -0.94
ERCC8-207ENST00000495985 TRIM35Q9UPQ4 493 aa9.16□□□□□ -0.94
ERCC8-207ENST00000495985 ATN1P54259 1190 aaPredicted RBP9.14□□□□□ -0.95
ERCC8-207ENST00000495985 CLCN6P51797 869 aa9.12□□□□□ -0.95
ERCC8-207ENST00000495985 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.12□□□□□ -0.951e-6■■□□□ 11.9
ERCC8-207ENST00000495985 ATMINO43313 823 aaPredicted RBP9.11□□□□□ -0.95
ERCC8-207ENST00000495985 DPY19L2Q6NUT2 758 aa9.1□□□□□ -0.95
ERCC8-207ENST00000495985 ILDR1Q86SU0 546 aaPredicted RBP9.09□□□□□ -0.95
ERCC8-207ENST00000495985 WDR70Q9NW82 654 aa9.09□□□□□ -0.95
ERCC8-207ENST00000495985 PRKCSHP14314 528 aaPredicted RBP9.08□□□□□ -0.96
ERCC8-207ENST00000495985 ASTLQ6HA08 431 aaPredicted RBP9.08□□□□□ -0.96
ERCC8-207ENST00000495985 NBR1Q14596 966 aa9.06□□□□□ -0.96
ERCC8-207ENST00000495985 NCKAP5LQ9HCH0 1330 aa9.05□□□□□ -0.96
ERCC8-207ENST00000495985 PELP1Q8IZL8 1130 aaKnown RBP9.05□□□□□ -0.96
ERCC8-207ENST00000495985 PDCD7Q8N8D1 485 aaKnown RBP9.04□□□□□ -0.96
ERCC8-207ENST00000495985 KCNV2Q8TDN2 545 aa9.04□□□□□ -0.96
ERCC8-207ENST00000495985 IRX5P78411 483 aaPredicted RBP9.03□□□□□ -0.96
ERCC8-207ENST00000495985 LARP6Q9BRS8 491 aaKnown RBP9.03□□□□□ -0.96
ERCC8-207ENST00000495985 PDE4AP27815 886 aa9.01□□□□□ -0.97
ERCC8-207ENST00000495985 DCBLD2Q96PD2 775 aa9.01□□□□□ -0.97
ERCC8-207ENST00000495985 CRISPLD2Q9H0B8 497 aa9□□□□□ -0.97
ERCC8-207ENST00000495985 OCEL1Q9H607 264 aa9□□□□□ -0.97
ERCC8-207ENST00000495985 IER5LQ5T953 404 aa8.99□□□□□ -0.97
ERCC8-207ENST00000495985 P3H3Q8IVL6 736 aa8.99□□□□□ -0.97
ERCC8-207ENST00000495985 MICALL2Q8IY33 904 aa8.98□□□□□ -0.97
ERCC8-207ENST00000495985 POTEIP0CG38 1075 aa8.97□□□□□ -0.97
ERCC8-207ENST00000495985 E2F4Q16254 413 aa8.97□□□□□ -0.97
ERCC8-207ENST00000495985 TPRNQ4KMQ1 711 aa8.97□□□□□ -0.97
ERCC8-207ENST00000495985 COLQQ9Y215 455 aaPredicted RBP8.97□□□□□ -0.97
ERCC8-207ENST00000495985 MFSD10Q14728 455 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms