RNA–Protein interactions for RNA: ENST00000495985.5

ERCC8-207, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-207ENST00000495985 AEBP2Q6ZN18 517 aaPredicted RBP18.39■□□□□ 0.53
ERCC8-207ENST00000495985 CHIC1Q5VXU3 224 aa18.15■□□□□ 0.5
ERCC8-207ENST00000495985 PHF23Q9BUL5 403 aaPredicted RBP16.06■□□□□ 0.16
ERCC8-207ENST00000495985 SENP3Q9H4L4 574 aaPredicted RBP15.45■□□□□ 0.06
ERCC8-207ENST00000495985 PLPPR3Q6T4P5 718 aa14.84□□□□□ -0.03
ERCC8-207ENST00000495985 FOXD1Q16676 465 aa14.39□□□□□ -0.11
ERCC8-207ENST00000495985 PPP6R1Q9UPN7 881 aa14.11□□□□□ -0.15
ERCC8-207ENST00000495985 ADRA2BP18089 450 aa14.1□□□□□ -0.15
ERCC8-207ENST00000495985 PIAS4Q8N2W9 510 aaPredicted RBP13.61□□□□□ -0.23
ERCC8-207ENST00000495985 POTEDQ86YR6 584 aa13.52□□□□□ -0.25
ERCC8-207ENST00000495985 MSH5O43196 834 aa13.44□□□□□ -0.26
ERCC8-207ENST00000495985 KCNA4P22459 653 aa13.18□□□□□ -0.3
ERCC8-207ENST00000495985 PPP4R3CPQ6ZMV5 832 aa13.15□□□□□ -0.3
ERCC8-207ENST00000495985 NCBP3Q53F19 620 aaKnown RBP12.81□□□□□ -0.36
ERCC8-207ENST00000495985 SCAF1Q9H7N4 1312 aaKnown RBP12.78□□□□□ -0.36
ERCC8-207ENST00000495985 MAPK8IP2Q13387 824 aaPredicted RBP12.74□□□□□ -0.37
ERCC8-207ENST00000495985 NPM3O75607 178 aaKnown RBP12.7□□□□□ -0.38
ERCC8-207ENST00000495985 CNKSR2Q8WXI2 1034 aa12.68□□□□□ -0.38
ERCC8-207ENST00000495985 EHMT2Q96KQ7 1210 aa12.58□□□□□ -0.4
ERCC8-207ENST00000495985 SLC4A1APQ9BWU0 796 aaKnown RBP12.57□□□□□ -0.4
ERCC8-207ENST00000495985 DMRT2Q9Y5R5 561 aa12.4□□□□□ -0.42
ERCC8-207ENST00000495985 RNF216Q9NWF9 866 aaPredicted RBP12.36□□□□□ -0.43
ERCC8-207ENST00000495985 CSRNP3Q8WYN3 585 aa12.3□□□□□ -0.44
ERCC8-207ENST00000495985 HOXD11P31277 338 aaPredicted RBP12.25□□□□□ -0.45
ERCC8-207ENST00000495985 DNAJC5BQ9UF47 199 aa12.18□□□□□ -0.46
ERCC8-207ENST00000495985 ZBTB22O15209 634 aa12.16□□□□□ -0.46
ERCC8-207ENST00000495985 FOXD4L1Q9NU39 408 aa11.99□□□□□ -0.49
ERCC8-207ENST00000495985 SLC4A2P04920 1241 aa11.95□□□□□ -0.5
ERCC8-207ENST00000495985 DCAF8L1A6NGE4 600 aa11.91□□□□□ -0.5
ERCC8-207ENST00000495985 CACNB1Q02641 598 aaPredicted RBP11.7□□□□□ -0.54
ERCC8-207ENST00000495985 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.69□□□□□ -0.54
ERCC8-207ENST00000495985 MYCNP04198 464 aaPredicted RBP11.67□□□□□ -0.54
ERCC8-207ENST00000495985 U3KPZ7 1027 aaPredicted RBP11.56□□□□□ -0.56
ERCC8-207ENST00000495985 ATXN8OSP0DMR3 200 aa11.51□□□□□ -0.57
ERCC8-207ENST00000495985 ATF5Q9Y2D1 282 aaPredicted RBP11.46□□□□□ -0.57
ERCC8-207ENST00000495985 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.4□□□□□ -0.58
ERCC8-207ENST00000495985 HNRNPUL2Q1KMD3 747 aaKnown RBP11.4□□□□□ -0.58
ERCC8-207ENST00000495985 SAMD1Q6SPF0 538 aaPredicted RBP11.4□□□□□ -0.58
ERCC8-207ENST00000495985 RNF39Q9H2S5 420 aa11.36□□□□□ -0.59
ERCC8-207ENST00000495985 C1QBPQ07021 282 aaKnown RBP11.24□□□□□ -0.61
ERCC8-207ENST00000495985 APLP2Q06481 763 aa11.19□□□□□ -0.62
ERCC8-207ENST00000495985 SPINK5Q9NQ38 1064 aaPredicted RBP11.19□□□□□ -0.62
ERCC8-207ENST00000495985 ZNF219Q9P2Y4 722 aaPredicted RBP11.18□□□□□ -0.62
ERCC8-207ENST00000495985 TRHP20396 242 aaPredicted RBP11.12□□□□□ -0.63
ERCC8-207ENST00000495985 CAPN15O75808 1086 aa11.09□□□□□ -0.63
ERCC8-207ENST00000495985 FKBP8Q14318 412 aa11.09□□□□□ -0.63
ERCC8-207ENST00000495985 POLA2Q14181 598 aa11□□□□□ -0.65
ERCC8-207ENST00000495985 ABCB7O75027 752 aa10.94□□□□□ -0.66
ERCC8-207ENST00000495985 MKRN4PQ13434 485 aaPredicted RBP10.94□□□□□ -0.66
ERCC8-207ENST00000495985 DSG3P32926 999 aa10.84□□□□□ -0.67
ERCC8-207ENST00000495985 FBLN2P98095 1184 aa10.84□□□□□ -0.67
ERCC8-207ENST00000495985 SPDYE4A6NLX3 237 aa10.79□□□□□ -0.68
ERCC8-207ENST00000495985 ZBTB12Q9Y330 459 aaPredicted RBP10.72□□□□□ -0.69
ERCC8-207ENST00000495985 PROM2Q8N271 834 aa10.62□□□□□ -0.71
ERCC8-207ENST00000495985 OSCARQ8IYS5 282 aa10.61□□□□□ -0.71
ERCC8-207ENST00000495985 RTN4Q9NQC3 1192 aaKnown RBP10.59□□□□□ -0.71
ERCC8-207ENST00000495985 POTEHQ6S545 545 aa10.58□□□□□ -0.72
ERCC8-207ENST00000495985 ZNF692Q9BU19 519 aaPredicted RBP10.56□□□□□ -0.72
ERCC8-207ENST00000495985 FBXO3Q9UK99 471 aa10.53□□□□□ -0.72
ERCC8-207ENST00000495985 AMER1Q5JTC6 1135 aaPredicted RBP10.51□□□□□ -0.73
ERCC8-207ENST00000495985 SPDYE2BA6NHP3 402 aa10.5□□□□□ -0.73
ERCC8-207ENST00000495985 SPDYE6P0CI01 402 aa10.5□□□□□ -0.73
ERCC8-207ENST00000495985 SPDYE2Q495Y8 402 aa10.5□□□□□ -0.73
ERCC8-207ENST00000495985 SSUH2Q9Y2M2 353 aa10.46□□□□□ -0.73
ERCC8-207ENST00000495985 VASPP50552 380 aaPredicted RBP10.43□□□□□ -0.74
ERCC8-207ENST00000495985 PABPN1Q86U42 306 aaKnown RBP eCLIP10.43□□□□□ -0.74
ERCC8-207ENST00000495985 IFNLR1Q8IU57 520 aaPredicted RBP10.36□□□□□ -0.75
ERCC8-207ENST00000495985 STAG3Q9UJ98 1225 aa10.27□□□□□ -0.77
ERCC8-207ENST00000495985 RBM42Q9BTD8 480 aaKnown RBP10.24□□□□□ -0.77
ERCC8-207ENST00000495985 MIER1Q8N108 512 aa10.22□□□□□ -0.77
ERCC8-207ENST00000495985 KLHL34Q8N239 644 aa10.21□□□□□ -0.77
ERCC8-207ENST00000495985 PLCD3Q8N3E9 789 aa10.21□□□□□ -0.77
ERCC8-207ENST00000495985 SLC24A1O60721 1099 aa10.2□□□□□ -0.78
ERCC8-207ENST00000495985 AKT1S1Q96B36 256 aa10.2□□□□□ -0.78
ERCC8-207ENST00000495985 REM2Q8IYK8 340 aaPredicted RBP10.15□□□□□ -0.78
ERCC8-207ENST00000495985 CLEC11AQ9Y240 323 aa10.14□□□□□ -0.79
ERCC8-207ENST00000495985 SPOCK2Q92563 424 aa10.13□□□□□ -0.79
ERCC8-207ENST00000495985 SPDYE1Q8NFV5 336 aaPredicted RBP10.12□□□□□ -0.79
ERCC8-207ENST00000495985 PKD2Q13563 968 aa10.11□□□□□ -0.79
ERCC8-207ENST00000495985 PLEKHG5O94827 1062 aa10.06□□□□□ -0.8
ERCC8-207ENST00000495985 PRR29P0C7W0 189 aa10.06□□□□□ -0.8
ERCC8-207ENST00000495985 PITPNM1O00562 1244 aa10.04□□□□□ -0.8
ERCC8-207ENST00000495985 CREBZFQ9NS37 354 aa10.01□□□□□ -0.81
ERCC8-207ENST00000495985 CHRDL2Q6WN34 429 aa10□□□□□ -0.81
ERCC8-207ENST00000495985 ZBTB47Q9UFB7 747 aaPredicted RBP10□□□□□ -0.81
ERCC8-207ENST00000495985 DCAF8L2P0C7V8 631 aa9.99□□□□□ -0.81
ERCC8-207ENST00000495985 ECM2O94769 699 aaPredicted RBP9.97□□□□□ -0.81
ERCC8-207ENST00000495985 CIZ1Q9ULV3 898 aaPredicted RBP9.97□□□□□ -0.81
ERCC8-207ENST00000495985 MNX1P50219 401 aaPredicted RBP9.94□□□□□ -0.82
ERCC8-207ENST00000495985 NUBP1P53384 320 aa9.92□□□□□ -0.82
ERCC8-207ENST00000495985 RGL2O15211 777 aa9.9□□□□□ -0.82
ERCC8-207ENST00000495985 CHADLQ6NUI6 762 aa9.9□□□□□ -0.82
ERCC8-207ENST00000495985 DCAF8Q5TAQ9 597 aa9.86□□□□□ -0.83
ERCC8-207ENST00000495985 GSE1Q14687 1217 aa9.83□□□□□ -0.84
ERCC8-207ENST00000495985 RASEFQ8IZ41 740 aa9.83□□□□□ -0.84
ERCC8-207ENST00000495985 NPM1P06748 294 aaKnown RBP eCLIP9.82□□□□□ -0.84
ERCC8-207ENST00000495985 PRKAR2AP13861 404 aaKnown RBP9.79□□□□□ -0.84
ERCC8-207ENST00000495985 FAM212AQ96EL1 285 aa9.79□□□□□ -0.84
ERCC8-207ENST00000495985 FXR2P51116 673 aaKnown RBP eCLIP9.78□□□□□ -0.84
ERCC8-207ENST00000495985 SP7Q8TDD2 431 aaPredicted RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms