RNA–Protein interactions for RNA: ENST00000494580.1

CTNNA3-204, Transcript of catenin alpha 3, humanhuman

TSL 3

Gene CTNNA3, Length 470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3-204ENST00000494580 URB2Q14146 1524 aaKnown RBP9.13□□□□□ -0.95
CTNNA3-204ENST00000494580 CEP164Q9UPV0 1460 aa9.13□□□□□ -0.95
CTNNA3-204ENST00000494580 WDR62O43379 1518 aa9.12□□□□□ -0.95
CTNNA3-204ENST00000494580 MRC2Q9UBG0 1479 aa9.12□□□□□ -0.95
CTNNA3-204ENST00000494580 PDS5BQ9NTI5 1447 aa9.12□□□□□ -0.95
CTNNA3-204ENST00000494580 CHRDL2Q6WN34 429 aa9.11□□□□□ -0.95
CTNNA3-204ENST00000494580 SP7Q8TDD2 431 aaPredicted RBP9.08□□□□□ -0.96
CTNNA3-204ENST00000494580 SSUH2Q9Y2M2 353 aa9.08□□□□□ -0.96
CTNNA3-204ENST00000494580 CUX2O14529 1486 aa9.08□□□□□ -0.96
CTNNA3-204ENST00000494580 AKT1S1Q96B36 256 aa9.07□□□□□ -0.96
CTNNA3-204ENST00000494580 CUX1P39880 1505 aa9.04□□□□□ -0.96
CTNNA3-204ENST00000494580 TOPBP1Q92547 1522 aa9.04□□□□□ -0.96
CTNNA3-204ENST00000494580 ABCC8Q09428 1581 aa9.03□□□□□ -0.96
CTNNA3-204ENST00000494580 DNMBPQ6XZF7 1577 aa9.03□□□□□ -0.96
CTNNA3-204ENST00000494580 SYNJ1O43426 1573 aa9□□□□□ -0.97
CTNNA3-204ENST00000494580 REM2Q8IYK8 340 aaPredicted RBP9□□□□□ -0.97
CTNNA3-204ENST00000494580 POLA1P09884 1462 aaPredicted RBP8.98□□□□□ -0.97
CTNNA3-204ENST00000494580 ZNF608Q9ULD9 1512 aaPredicted RBP8.98□□□□□ -0.97
CTNNA3-204ENST00000494580 PROM2Q8N271 834 aa8.97□□□□□ -0.97
CTNNA3-204ENST00000494580 TARBP1Q13395 1621 aaKnown RBP8.97□□□□□ -0.97
CTNNA3-204ENST00000494580 FGD5Q6ZNL6 1462 aa8.96□□□□□ -0.97
CTNNA3-204ENST00000494580 WDR97A6NE52 1622 aa8.96□□□□□ -0.98
CTNNA3-204ENST00000494580 RAD54L2Q9Y4B4 1467 aa8.96□□□□□ -0.98
CTNNA3-204ENST00000494580 EIF4G3O43432 1585 aaKnown RBP8.95□□□□□ -0.98
CTNNA3-204ENST00000494580 BIVM-ERCC5R4GMW8 1640 aa8.94□□□□□ -0.98
CTNNA3-204ENST00000494580 TOP2BQ02880 1626 aa8.92□□□□□ -0.98
CTNNA3-204ENST00000494580 IFT140Q96RY7 1462 aa8.91□□□□□ -0.98
CTNNA3-204ENST00000494580 WRNQ14191 1432 aaPredicted RBP eCLIP8.91□□□□□ -0.981e-6■■■■■ 58.5
CTNNA3-204ENST00000494580 SPDYE1Q8NFV5 336 aaPredicted RBP8.91□□□□□ -0.98
CTNNA3-204ENST00000494580 CLEC11AQ9Y240 323 aa8.91□□□□□ -0.98
CTNNA3-204ENST00000494580 STAG3Q9UJ98 1225 aa8.89□□□□□ -0.99
CTNNA3-204ENST00000494580 PITPNM1O00562 1244 aa8.88□□□□□ -0.99
CTNNA3-204ENST00000494580 ABCA5Q8WWZ7 1642 aa8.87□□□□□ -0.99
CTNNA3-204ENST00000494580 AQRO60306 1485 aaKnown RBP eCLIP8.87□□□□□ -0.99
CTNNA3-204ENST00000494580 FBXO3Q9UK99 471 aa8.86□□□□□ -0.99
CTNNA3-204ENST00000494580 TDRD9Q8NDG6 1382 aaKnown RBP8.85□□□□□ -0.99
CTNNA3-204ENST00000494580 ABCA10Q8WWZ4 1543 aa8.85□□□□□ -0.99
CTNNA3-204ENST00000494580 PBRM1Q86U86 1689 aa8.85□□□□□ -0.99
CTNNA3-204ENST00000494580 SOGA1O94964 1423 aa8.84□□□□□ -0.99
CTNNA3-204ENST00000494580 PRR29P0C7W0 189 aa8.83□□□□□ -1
CTNNA3-204ENST00000494580 CHD1O14646 1710 aa8.82□□□□□ -1
CTNNA3-204ENST00000494580 SNAPC4Q5SXM2 1469 aa8.82□□□□□ -1
CTNNA3-204ENST00000494580 ADAMTS12P58397 1594 aa8.79□□□□□ -1
CTNNA3-204ENST00000494580 HAX1O00165 279 aa8.78□□□□□ -1
CTNNA3-204ENST00000494580 GAPVD1Q14C86 1478 aa8.77□□□□□ -1
CTNNA3-204ENST00000494580 PIP4P2Q8N4L2 257 aa8.77□□□□□ -1.01
CTNNA3-204ENST00000494580 RUSC2Q8N2Y8 1516 aa8.76□□□□□ -1.01
CTNNA3-204ENST00000494580 GRIN2BQ13224 1484 aa8.76□□□□□ -1.01
CTNNA3-204ENST00000494580 MIER1Q8N108 512 aa8.75□□□□□ -1.01
CTNNA3-204ENST00000494580 MAGI1Q96QZ7 1491 aaPredicted RBP8.74□□□□□ -1.01
CTNNA3-204ENST00000494580 CLASP1Q7Z460 1538 aa8.72□□□□□ -1.01
CTNNA3-204ENST00000494580 VASPP50552 380 aaPredicted RBP8.72□□□□□ -1.01
CTNNA3-204ENST00000494580 CEP170Q5SW79 1584 aa8.72□□□□□ -1.01
CTNNA3-204ENST00000494580 SYNJ2O15056 1496 aa8.71□□□□□ -1.01
CTNNA3-204ENST00000494580 ERICH3Q5RHP9 1530 aa8.71□□□□□ -1.01
CTNNA3-204ENST00000494580 FXR2P51116 673 aaKnown RBP eCLIP8.71□□□□□ -1.02
CTNNA3-204ENST00000494580 PLCD3Q8N3E9 789 aa8.71□□□□□ -1.02
CTNNA3-204ENST00000494580 GRIN2AQ12879 1464 aa8.7□□□□□ -1.02
CTNNA3-204ENST00000494580 DNAJC5Q9H3Z4 198 aa8.69□□□□□ -1.02
CTNNA3-204ENST00000494580 PLEKHG5O94827 1062 aa8.68□□□□□ -1.02
CTNNA3-204ENST00000494580 CHADLQ6NUI6 762 aa8.68□□□□□ -1.02
CTNNA3-204ENST00000494580 CREBZFQ9NS37 354 aa8.68□□□□□ -1.02
CTNNA3-204ENST00000494580 PRKAR2AP13861 404 aaKnown RBP8.67□□□□□ -1.02
CTNNA3-204ENST00000494580 KIF27Q86VH2 1401 aa8.67□□□□□ -1.02
CTNNA3-204ENST00000494580 ERCC6L2Q5T890 1561 aa8.66□□□□□ -1.02
CTNNA3-204ENST00000494580 FHAD1B1AJZ9 1412 aa8.66□□□□□ -1.02
CTNNA3-204ENST00000494580 NUP160Q12769 1436 aa8.66□□□□□ -1.02
CTNNA3-204ENST00000494580 IGF1RP08069 1367 aa8.66□□□□□ -1.02
CTNNA3-204ENST00000494580 CUL7Q14999 1698 aa8.65□□□□□ -1.02
CTNNA3-204ENST00000494580 RIMBP3CA6NJZ7 1639 aa8.65□□□□□ -1.02
CTNNA3-204ENST00000494580 RIMBP3BA6NNM3 1639 aa8.65□□□□□ -1.02
CTNNA3-204ENST00000494580 RIMBP3Q9UFD9 1639 aa8.65□□□□□ -1.02
CTNNA3-204ENST00000494580 ARHGEF11O15085 1522 aa8.64□□□□□ -1.03
CTNNA3-204ENST00000494580 KLHL34Q8N239 644 aa8.63□□□□□ -1.03
CTNNA3-204ENST00000494580 TRIM41Q8WV44 630 aa8.62□□□□□ -1.03
CTNNA3-204ENST00000494580 ARAP1Q96P48 1450 aa8.62□□□□□ -1.03
CTNNA3-204ENST00000494580 SHROOM2Q13796 1616 aa8.62□□□□□ -1.03
CTNNA3-204ENST00000494580 EVX2Q03828 476 aa8.61□□□□□ -1.03
CTNNA3-204ENST00000494580 IFNLR1Q8IU57 520 aaPredicted RBP8.61□□□□□ -1.03
CTNNA3-204ENST00000494580 CHMP7Q8WUX9 453 aaPredicted RBP8.6□□□□□ -1.03
CTNNA3-204ENST00000494580 PRXQ9BXM0 1461 aa8.59□□□□□ -1.03
CTNNA3-204ENST00000494580 FARP1Q9Y4F1 1045 aaPredicted RBP8.59□□□□□ -1.03
CTNNA3-204ENST00000494580 CARMIL1Q5VZK9 1371 aa8.59□□□□□ -1.03
CTNNA3-204ENST00000494580 RAPGEF2Q9Y4G8 1499 aa8.58□□□□□ -1.04
CTNNA3-204ENST00000494580 ZBTB47Q9UFB7 747 aaPredicted RBP8.58□□□□□ -1.04
CTNNA3-204ENST00000494580 MNX1P50219 401 aaPredicted RBP8.57□□□□□ -1.04
CTNNA3-204ENST00000494580 NPM1P06748 294 aaKnown RBP eCLIP8.55□□□□□ -1.04
CTNNA3-204ENST00000494580 CTTNBP2Q8WZ74 1663 aa8.55□□□□□ -1.04
CTNNA3-204ENST00000494580 FAM9AQ8IZU1 332 aaPredicted RBP8.54□□□□□ -1.04
CTNNA3-204ENST00000494580 IQGAP2Q13576 1575 aa8.53□□□□□ -1.04
CTNNA3-204ENST00000494580 KIF21BO75037 1637 aa8.53□□□□□ -1.04
CTNNA3-204ENST00000494580 LHX8Q68G74 356 aa8.52□□□□□ -1.05
CTNNA3-204ENST00000494580 SPOCK2Q92563 424 aa8.52□□□□□ -1.05
CTNNA3-204ENST00000494580 KIAA0586Q9BVV6 1533 aa8.52□□□□□ -1.05
CTNNA3-204ENST00000494580 DISP1Q96F81 1524 aa8.51□□□□□ -1.05
CTNNA3-204ENST00000494580 PRG4Q92954 1404 aaPredicted RBP8.51□□□□□ -1.05
CTNNA3-204ENST00000494580 KIAA0556O60303 1618 aa8.5□□□□□ -1.05
CTNNA3-204ENST00000494580 UGGT2Q9NYU1 1516 aa8.49□□□□□ -1.05
CTNNA3-204ENST00000494580 EEA1Q15075 1411 aa8.49□□□□□ -1.05
CTNNA3-204ENST00000494580 PLSCR2Q9NRY7 297 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms