RNA–Protein interactions for RNA: ENST00000494580.1

CTNNA3-204, Transcript of catenin alpha 3, humanhuman

TSL 3

Gene CTNNA3, Length 470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3-204ENST00000494580 AEBP2Q6ZN18 517 aaPredicted RBP16.26■□□□□ 0.19
CTNNA3-204ENST00000494580 CHIC1Q5VXU3 224 aa15.87■□□□□ 0.13
CTNNA3-204ENST00000494580 PHF23Q9BUL5 403 aaPredicted RBP13.97□□□□□ -0.17
CTNNA3-204ENST00000494580 SENP3Q9H4L4 574 aaPredicted RBP13.79□□□□□ -0.2
CTNNA3-204ENST00000494580 PLPPR3Q6T4P5 718 aa12.89□□□□□ -0.35
CTNNA3-204ENST00000494580 POTEDQ86YR6 584 aa12.88□□□□□ -0.35
CTNNA3-204ENST00000494580 FOXD1Q16676 465 aa12.81□□□□□ -0.36
CTNNA3-204ENST00000494580 NISCHQ9Y2I1 1504 aa12.42□□□□□ -0.42
CTNNA3-204ENST00000494580 PPP6R1Q9UPN7 881 aa12.35□□□□□ -0.43
CTNNA3-204ENST00000494580 ADRA2BP18089 450 aa12.34□□□□□ -0.43
CTNNA3-204ENST00000494580 MSH5O43196 834 aa12.18□□□□□ -0.46
CTNNA3-204ENST00000494580 PIAS4Q8N2W9 510 aaPredicted RBP12.09□□□□□ -0.47
CTNNA3-204ENST00000494580 PPP4R3CPQ6ZMV5 832 aa11.38□□□□□ -0.59
CTNNA3-204ENST00000494580 SCAF1Q9H7N4 1312 aaKnown RBP11.29□□□□□ -0.6
CTNNA3-204ENST00000494580 MAPK8IP2Q13387 824 aaPredicted RBP11.22□□□□□ -0.61
CTNNA3-204ENST00000494580 KCNA4P22459 653 aa11.09□□□□□ -0.63
CTNNA3-204ENST00000494580 NCBP3Q53F19 620 aaKnown RBP11.08□□□□□ -0.64
CTNNA3-204ENST00000494580 CNKSR2Q8WXI2 1034 aa11.05□□□□□ -0.64
CTNNA3-204ENST00000494580 CCDC180Q9P1Z9 1646 aa11.02□□□□□ -0.65
CTNNA3-204ENST00000494580 DMRT2Q9Y5R5 561 aa11□□□□□ -0.65
CTNNA3-204ENST00000494580 NPM3O75607 178 aaKnown RBP10.89□□□□□ -0.67
CTNNA3-204ENST00000494580 CACNB1Q02641 598 aaPredicted RBP10.83□□□□□ -0.68
CTNNA3-204ENST00000494580 RNF216Q9NWF9 866 aaPredicted RBP10.83□□□□□ -0.68
CTNNA3-204ENST00000494580 HOXD11P31277 338 aaPredicted RBP10.77□□□□□ -0.69
CTNNA3-204ENST00000494580 ABCC9O60706 1549 aa10.77□□□□□ -0.69
CTNNA3-204ENST00000494580 DCAF8L1A6NGE4 600 aa10.6□□□□□ -0.71
CTNNA3-204ENST00000494580 SLC4A1APQ9BWU0 796 aaKnown RBP10.57□□□□□ -0.72
CTNNA3-204ENST00000494580 DNAJC5BQ9UF47 199 aa10.52□□□□□ -0.73
CTNNA3-204ENST00000494580 ZCCHC6Q5VYS8 1495 aaKnown RBP10.42□□□□□ -0.74
CTNNA3-204ENST00000494580 RNF39Q9H2S5 420 aa10.34□□□□□ -0.75
CTNNA3-204ENST00000494580 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.31□□□□□ -0.76
CTNNA3-204ENST00000494580 RB1CC1Q8TDY2 1594 aa10.3□□□□□ -0.76
CTNNA3-204ENST00000494580 NACADO15069 1562 aa10.29□□□□□ -0.76
CTNNA3-204ENST00000494580 SLC4A2P04920 1241 aa10.28□□□□□ -0.76
CTNNA3-204ENST00000494580 EHMT2Q96KQ7 1210 aa10.28□□□□□ -0.76
CTNNA3-204ENST00000494580 MYO15BQ96JP2 1530 aa10.23□□□□□ -0.77
CTNNA3-204ENST00000494580 DCAF1Q9Y4B6 1507 aa10.23□□□□□ -0.77
CTNNA3-204ENST00000494580 DCAF8L2P0C7V8 631 aa10.22□□□□□ -0.77
CTNNA3-204ENST00000494580 UNC13AQ9UPW8 1703 aa10.21□□□□□ -0.77
CTNNA3-204ENST00000494580 ZBTB22O15209 634 aa10.19□□□□□ -0.78
CTNNA3-204ENST00000494580 FOXD4L1Q9NU39 408 aa10.19□□□□□ -0.78
CTNNA3-204ENST00000494580 C1QBPQ07021 282 aaKnown RBP10.15□□□□□ -0.78
CTNNA3-204ENST00000494580 CSRNP3Q8WYN3 585 aa10.15□□□□□ -0.78
CTNNA3-204ENST00000494580 SCRIBQ14160 1630 aa10.14□□□□□ -0.79
CTNNA3-204ENST00000494580 BICRAQ9NZM4 1560 aa10.12□□□□□ -0.79
CTNNA3-204ENST00000494580 U3KPZ7 1027 aaPredicted RBP10.1□□□□□ -0.79
CTNNA3-204ENST00000494580 MYCNP04198 464 aaPredicted RBP10.06□□□□□ -0.8
CTNNA3-204ENST00000494580 PABPN1Q86U42 306 aaKnown RBP eCLIP10.04□□□□□ -0.8
CTNNA3-204ENST00000494580 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.99□□□□□ -0.81
CTNNA3-204ENST00000494580 HNRNPUL2Q1KMD3 747 aaKnown RBP9.99□□□□□ -0.81
CTNNA3-204ENST00000494580 POTEHQ6S545 545 aa9.99□□□□□ -0.81
CTNNA3-204ENST00000494580 SAMD1Q6SPF0 538 aaPredicted RBP9.95□□□□□ -0.82
CTNNA3-204ENST00000494580 SHROOM4Q9ULL8 1493 aa9.88□□□□□ -0.83
CTNNA3-204ENST00000494580 APLP2Q06481 763 aa9.88□□□□□ -0.83
CTNNA3-204ENST00000494580 ATXN8OSP0DMR3 200 aa9.84□□□□□ -0.83
CTNNA3-204ENST00000494580 SPINK5Q9NQ38 1064 aaPredicted RBP9.84□□□□□ -0.83
CTNNA3-204ENST00000494580 CAPN15O75808 1086 aa9.83□□□□□ -0.84
CTNNA3-204ENST00000494580 ATF5Q9Y2D1 282 aaPredicted RBP9.82□□□□□ -0.84
CTNNA3-204ENST00000494580 EIF4G1Q04637 1599 aaKnown RBP9.8□□□□□ -0.84
CTNNA3-204ENST00000494580 TRHP20396 242 aaPredicted RBP9.79□□□□□ -0.84
CTNNA3-204ENST00000494580 CC2D2AQ9P2K1 1620 aa9.74□□□□□ -0.85
CTNNA3-204ENST00000494580 CECR2Q9BXF3 1484 aa9.74□□□□□ -0.85
CTNNA3-204ENST00000494580 ZNF219Q9P2Y4 722 aaPredicted RBP9.74□□□□□ -0.85
CTNNA3-204ENST00000494580 SMARCA4P51532 1647 aa9.67□□□□□ -0.86
CTNNA3-204ENST00000494580 MROH2BQ7Z745 1585 aa9.63□□□□□ -0.87
CTNNA3-204ENST00000494580 ABCB7O75027 752 aa9.63□□□□□ -0.87
CTNNA3-204ENST00000494580 DSG3P32926 999 aa9.63□□□□□ -0.87
CTNNA3-204ENST00000494580 POLA2Q14181 598 aa9.62□□□□□ -0.87
CTNNA3-204ENST00000494580 BAZ1AQ9NRL2 1556 aaPredicted RBP9.58□□□□□ -0.88
CTNNA3-204ENST00000494580 ATAD2BQ9ULI0 1458 aa9.57□□□□□ -0.88
CTNNA3-204ENST00000494580 PEG3Q9GZU2 1588 aa9.54□□□□□ -0.88
CTNNA3-204ENST00000494580 WIZO95785 1651 aa9.54□□□□□ -0.88
CTNNA3-204ENST00000494580 NCAPD3P42695 1498 aa9.5□□□□□ -0.89
CTNNA3-204ENST00000494580 HMGXB3Q12766 1538 aa9.5□□□□□ -0.89
CTNNA3-204ENST00000494580 SMARCA2P51531 1590 aa9.5□□□□□ -0.89
CTNNA3-204ENST00000494580 RSF1Q96T23 1441 aaPredicted RBP9.49□□□□□ -0.89
CTNNA3-204ENST00000494580 BAZ1BQ9UIG0 1483 aaKnown RBP9.47□□□□□ -0.89
CTNNA3-204ENST00000494580 ZBTB12Q9Y330 459 aaPredicted RBP9.42□□□□□ -0.9
CTNNA3-204ENST00000494580 FBLN2P98095 1184 aa9.41□□□□□ -0.9
CTNNA3-204ENST00000494580 TOP2AP11388 1531 aaKnown RBP9.41□□□□□ -0.9
CTNNA3-204ENST00000494580 NESP48681 1621 aa9.38□□□□□ -0.91
CTNNA3-204ENST00000494580 MKRN4PQ13434 485 aaPredicted RBP9.37□□□□□ -0.91
CTNNA3-204ENST00000494580 KIF21AQ7Z4S6 1674 aa9.27□□□□□ -0.93
CTNNA3-204ENST00000494580 CCDC88BA6NC98 1476 aa9.27□□□□□ -0.93
CTNNA3-204ENST00000494580 OSCARQ8IYS5 282 aa9.26□□□□□ -0.93
CTNNA3-204ENST00000494580 THOC2Q8NI27 1593 aaKnown RBP9.24□□□□□ -0.93
CTNNA3-204ENST00000494580 LAMC3Q9Y6N6 1575 aa9.24□□□□□ -0.93
CTNNA3-204ENST00000494580 CFTRP13569 1480 aa9.21□□□□□ -0.93
CTNNA3-204ENST00000494580 SUPT5HO00267 1087 aaKnown RBP9.21□□□□□ -0.94
CTNNA3-204ENST00000494580 CADPSQ9ULU8 1353 aa9.21□□□□□ -0.94
CTNNA3-204ENST00000494580 ERCC6Q03468 1493 aa9.2□□□□□ -0.94
CTNNA3-204ENST00000494580 FKBP8Q14318 412 aa9.19□□□□□ -0.94
CTNNA3-204ENST00000494580 PRDM2Q13029 1718 aa9.19□□□□□ -0.94
CTNNA3-204ENST00000494580 SPDYE4A6NLX3 237 aa9.18□□□□□ -0.94
CTNNA3-204ENST00000494580 ZNF692Q9BU19 519 aaPredicted RBP9.18□□□□□ -0.94
CTNNA3-204ENST00000494580 SPDYE2BA6NHP3 402 aa9.17□□□□□ -0.94
CTNNA3-204ENST00000494580 SPDYE6P0CI01 402 aa9.17□□□□□ -0.94
CTNNA3-204ENST00000494580 SPDYE2Q495Y8 402 aa9.17□□□□□ -0.94
CTNNA3-204ENST00000494580 RBM42Q9BTD8 480 aaKnown RBP9.17□□□□□ -0.94
CTNNA3-204ENST00000494580 FANCD2Q9BXW9 1451 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms