RNA–Protein interactions for RNA: ENST00000494062.2

SPART-209, Transcript of spartin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPART, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPART-209ENST00000494062 ZNF316A6NFI3 1004 aaPredicted RBP27.25■■□□□ 1.95
SPART-209ENST00000494062 ARID3CA6NKF2 412 aa27.24■■□□□ 1.95
SPART-209ENST00000494062 AQRO60306 1485 aaKnown RBP eCLIP27.21■■□□□ 1.952e-9■■□□□ 12.5
SPART-209ENST00000494062 RRBP1Q9P2E9 1410 aaKnown RBP27.21■■□□□ 1.95
SPART-209ENST00000494062 FHAD1B1AJZ9 1412 aa27.21■■□□□ 1.95
SPART-209ENST00000494062 PHLDB1Q86UU1 1377 aa27.2■■□□□ 1.95
SPART-209ENST00000494062 TIAM1Q13009 1591 aa27.19■■□□□ 1.94
SPART-209ENST00000494062 PCF11O94913 1555 aaKnown RBP27.18■■□□□ 1.94
SPART-209ENST00000494062 DHX57Q6P158 1386 aaKnown RBP27.17■■□□□ 1.94
SPART-209ENST00000494062 LRRC9Q6ZRR7 1453 aa27.16■■□□□ 1.94
SPART-209ENST00000494062 CUL7Q14999 1698 aa27.12■■□□□ 1.93
SPART-209ENST00000494062 ABCA5Q8WWZ7 1642 aa27.07■■□□□ 1.92
SPART-209ENST00000494062 WDR97A6NE52 1622 aa27.07■■□□□ 1.92
SPART-209ENST00000494062 RAB3GAP2Q9H2M9 1393 aa27.04■■□□□ 1.92
SPART-209ENST00000494062 YTHDC1Q96MU7 727 aaKnown RBP27.03■■□□□ 1.92
SPART-209ENST00000494062 MTUS2Q5JR59 1369 aa27.02■■□□□ 1.92
SPART-209ENST00000494062 MRC2Q9UBG0 1479 aa27■■□□□ 1.91
SPART-209ENST00000494062 CTTNBP2Q8WZ74 1663 aa27■■□□□ 1.91
SPART-209ENST00000494062 ZNF608Q9ULD9 1512 aaPredicted RBP27■■□□□ 1.91
SPART-209ENST00000494062 FBLN2P98095 1184 aa27■■□□□ 1.91
SPART-209ENST00000494062 CASKIN1Q8WXD9 1431 aa27■■□□□ 1.91
SPART-209ENST00000494062 TARBP1Q13395 1621 aaKnown RBP26.99■■□□□ 1.91
SPART-209ENST00000494062 FMN1Q68DA7 1419 aa26.98■■□□□ 1.91
SPART-209ENST00000494062 EFCAB5A4FU69 1503 aa26.98■■□□□ 1.91
SPART-209ENST00000494062 NEUROD1Q13562 356 aa26.97■■□□□ 1.91
SPART-209ENST00000494062 ERCC6Q03468 1493 aa26.96■■□□□ 1.91
SPART-209ENST00000494062 FYCO1Q9BQS8 1478 aa26.96■■□□□ 1.91
SPART-209ENST00000494062 MAP3K1Q13233 1512 aa26.93■■□□□ 1.9
SPART-209ENST00000494062 MIER1Q8N108 512 aa26.92■■□□□ 1.9
SPART-209ENST00000494062 SIN3AQ96ST3 1273 aa26.9■■□□□ 1.9
SPART-209ENST00000494062 SCAF1Q9H7N4 1312 aaKnown RBP26.89■■□□□ 1.9
SPART-209ENST00000494062 SETD5Q9C0A6 1442 aa26.88■■□□□ 1.89
SPART-209ENST00000494062 SNAPC4Q5SXM2 1469 aa26.87■■□□□ 1.89
SPART-209ENST00000494062 CFAP43Q8NDM7 1665 aa26.87■■□□□ 1.89
SPART-209ENST00000494062 CLSPNQ9HAW4 1339 aa26.84■■□□□ 1.89
SPART-209ENST00000494062 GRIN2BQ13224 1484 aa26.83■■□□□ 1.89
SPART-209ENST00000494062 CHIC2Q9UKJ5 165 aa26.82■■□□□ 1.88
SPART-209ENST00000494062 PBRM1Q86U86 1689 aa26.8■■□□□ 1.88
SPART-209ENST00000494062 CHMP7Q8WUX9 453 aaPredicted RBP26.78■■□□□ 1.88
SPART-209ENST00000494062 SAMD9Q5K651 1589 aa26.77■■□□□ 1.88
SPART-209ENST00000494062 FGD6Q6ZV73 1430 aa26.77■■□□□ 1.88
SPART-209ENST00000494062 IFT140Q96RY7 1462 aa26.75■■□□□ 1.87
SPART-209ENST00000494062 ACIN1Q9UKV3 1341 aaKnown RBP26.74■■□□□ 1.87
SPART-209ENST00000494062 ADAMTS12P58397 1594 aa26.73■■□□□ 1.87
SPART-209ENST00000494062 NCOA2Q15596 1464 aa26.73■■□□□ 1.87
SPART-209ENST00000494062 RRP7BPQ9NSQ0 103 aa26.72■■□□□ 1.87
SPART-209ENST00000494062 IQGAP2Q13576 1575 aa26.72■■□□□ 1.87
SPART-209ENST00000494062 CENPBP07199 599 aaPredicted RBP26.69■■□□□ 1.86
SPART-209ENST00000494062 LRRIQ1Q96JM4 1722 aa26.69■■□□□ 1.86
SPART-209ENST00000494062 MAPKBP1O60336 1514 aa26.68■■□□□ 1.86
SPART-209ENST00000494062 CDK13Q14004 1512 aaKnown RBP26.68■■□□□ 1.86
SPART-209ENST00000494062 PTPRKQ15262 1439 aa26.68■■□□□ 1.86
SPART-209ENST00000494062 WDR62O43379 1518 aa26.67■■□□□ 1.86
SPART-209ENST00000494062 HIRIP3Q9BW71 556 aaPredicted RBP26.66■■□□□ 1.86
SPART-209ENST00000494062 MAGI3Q5TCQ9 1506 aa26.65■■□□□ 1.86
SPART-209ENST00000494062 MYOM3Q5VTT5 1437 aa26.62■■□□□ 1.85
SPART-209ENST00000494062 EIF4G3O43432 1585 aaKnown RBP26.6■■□□□ 1.85
SPART-209ENST00000494062 EPRSP07814 1512 aaKnown RBP26.58■■□□□ 1.85
SPART-209ENST00000494062 TRIM52Q96A61 297 aa26.57■■□□□ 1.84
SPART-209ENST00000494062 GTF3C3Q9Y5Q9 886 aa26.57■■□□□ 1.84
SPART-209ENST00000494062 GRIN2AQ12879 1464 aa26.56■■□□□ 1.84
SPART-209ENST00000494062 EHBP1L1Q8N3D4 1523 aa26.53■■□□□ 1.84
SPART-209ENST00000494062 CCDC18Q5T9S5 1454 aa26.52■■□□□ 1.84
SPART-209ENST00000494062 KIAA0586Q9BVV6 1533 aa26.52■■□□□ 1.84
SPART-209ENST00000494062 SUPT6HQ7KZ85 1726 aaKnown RBP26.52■■□□□ 1.84
SPART-209ENST00000494062 ZNF644Q9H582 1327 aaPredicted RBP26.52■■□□□ 1.84
SPART-209ENST00000494062 THOC2Q8NI27 1593 aaKnown RBP26.5■■□□□ 1.83
SPART-209ENST00000494062 HECW1Q76N89 1606 aa26.49■■□□□ 1.83
SPART-209ENST00000494062 ZNF777Q9ULD5 760 aaPredicted RBP26.49■■□□□ 1.83
SPART-209ENST00000494062 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.49■■□□□ 1.83
SPART-209ENST00000494062 DISP1Q96F81 1524 aa26.49■■□□□ 1.83
SPART-209ENST00000494062 JPH4Q96JJ6 628 aa26.48■■□□□ 1.83
SPART-209ENST00000494062 UGGT2Q9NYU1 1516 aa26.46■■□□□ 1.83
SPART-209ENST00000494062 FOXD1Q16676 465 aa26.44■■□□□ 1.82
SPART-209ENST00000494062 NAIPQ13075 1403 aa26.44■■□□□ 1.82
SPART-209ENST00000494062 PTPN23Q9H3S7 1636 aa26.44■■□□□ 1.82
SPART-209ENST00000494062 HFM1A2PYH4 1435 aa26.43■■□□□ 1.82
SPART-209ENST00000494062 DDX10Q13206 875 aaKnown RBP26.42■■□□□ 1.82
SPART-209ENST00000494062 PLB1Q6P1J6 1458 aa26.41■■□□□ 1.82
SPART-209ENST00000494062 KIAA0556O60303 1618 aa26.41■■□□□ 1.82
SPART-209ENST00000494062 TONSLQ96HA7 1378 aa26.4■■□□□ 1.82
SPART-209ENST00000494062 SYNJ2O15056 1496 aa26.39■■□□□ 1.81
SPART-209ENST00000494062 CDK11AQ9UQ88 783 aaPredicted RBP26.39■■□□□ 1.81
SPART-209ENST00000494062 NUP153P49790 1475 aaKnown RBP26.38■■□□□ 1.81
SPART-209ENST00000494062 PRG4Q92954 1404 aaPredicted RBP26.38■■□□□ 1.81
SPART-209ENST00000494062 CEP170Q5SW79 1584 aa26.37■■□□□ 1.81
SPART-209ENST00000494062 PPP1R15AO75807 674 aaPredicted RBP26.36■■□□□ 1.81
SPART-209ENST00000494062 MAGI1Q96QZ7 1491 aaPredicted RBP26.36■■□□□ 1.81
SPART-209ENST00000494062 UACAQ9BZF9 1416 aa26.33■■□□□ 1.81
SPART-209ENST00000494062 KCNH8Q96L42 1107 aa26.32■■□□□ 1.8
SPART-209ENST00000494062 ARHGEF11O15085 1522 aa26.32■■□□□ 1.8
SPART-209ENST00000494062 CFDP1Q9UEE9 299 aaPredicted RBP26.31■■□□□ 1.8
SPART-209ENST00000494062 CARMIL2Q6F5E8 1435 aa26.26■■□□□ 1.79
SPART-209ENST00000494062 RAPGEF6Q8TEU7 1601 aa26.26■■□□□ 1.79
SPART-209ENST00000494062 KDM6BO15054 1643 aa26.24■■□□□ 1.79
SPART-209ENST00000494062 MPHOSPH9Q99550 1183 aa26.24■■□□□ 1.79
SPART-209ENST00000494062 TCOF1Q13428 1488 aaKnown RBP26.21■■□□□ 1.79
SPART-209ENST00000494062 MIA2Q96PC5 1412 aa26.21■■□□□ 1.79
SPART-209ENST00000494062 PLEKHD1A6NEE1 506 aa26.2■■□□□ 1.79
SPART-209ENST00000494062 TIMELESSQ9UNS1 1208 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms