RNA–Protein interactions for RNA: ENST00000492260.5

ABCA2-221, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 5

Gene ABCA2, Length 2,062 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-221ENST00000492260 CTTNBP2Q8WZ74 1663 aa28.32■■■□□ 2.12
ABCA2-221ENST00000492260 CFAP43Q8NDM7 1665 aa28.3■■■□□ 2.12
ABCA2-221ENST00000492260 ABCA5Q8WWZ7 1642 aa28.29■■■□□ 2.12
ABCA2-221ENST00000492260 LRRC9Q6ZRR7 1453 aa28.28■■■□□ 2.12
ABCA2-221ENST00000492260 DHX57Q6P158 1386 aaKnown RBP28.28■■■□□ 2.12
ABCA2-221ENST00000492260 PCF11O94913 1555 aaKnown RBP28.26■■■□□ 2.11
ABCA2-221ENST00000492260 AQRO60306 1485 aaKnown RBP eCLIP28.22■■■□□ 2.116e-7■■■■□ 20.2
ABCA2-221ENST00000492260 FYCO1Q9BQS8 1478 aa28.22■■■□□ 2.11
ABCA2-221ENST00000492260 KIF21AQ7Z4S6 1674 aa28.2■■■□□ 2.11
ABCA2-221ENST00000492260 GAPVD1Q14C86 1478 aa28.18■■■□□ 2.1
ABCA2-221ENST00000492260 CASKIN1Q8WXD9 1431 aa28.17■■■□□ 2.1
ABCA2-221ENST00000492260 FHOD3Q2V2M9 1422 aa28.17■■■□□ 2.1
ABCA2-221ENST00000492260 TDRD9Q8NDG6 1382 aaKnown RBP28.12■■■□□ 2.09
ABCA2-221ENST00000492260 FMN1Q68DA7 1419 aa28.1■■■□□ 2.09
ABCA2-221ENST00000492260 TARBP1Q13395 1621 aaKnown RBP28.1■■■□□ 2.09
ABCA2-221ENST00000492260 DNAJC5BQ9UF47 199 aa28.1■■■□□ 2.09
ABCA2-221ENST00000492260 P3H3Q8IVL6 736 aa28.09■■■□□ 2.09
ABCA2-221ENST00000492260 PHLDB1Q86UU1 1377 aa28.09■■■□□ 2.09
ABCA2-221ENST00000492260 SAMD9Q5K651 1589 aa28.08■■■□□ 2.09
ABCA2-221ENST00000492260 SNAPC4Q5SXM2 1469 aa28.02■■■□□ 2.08
ABCA2-221ENST00000492260 SCAF1Q9H7N4 1312 aaKnown RBP28■■■□□ 2.07
ABCA2-221ENST00000492260 RAB3GAP2Q9H2M9 1393 aa27.99■■■□□ 2.07
ABCA2-221ENST00000492260 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.99■■■□□ 2.07
ABCA2-221ENST00000492260 ITGAEP38570 1179 aa27.97■■■□□ 2.07
ABCA2-221ENST00000492260 ACIN1Q9UKV3 1341 aaKnown RBP27.97■■■□□ 2.07
ABCA2-221ENST00000492260 SETD5Q9C0A6 1442 aa27.96■■■□□ 2.07
ABCA2-221ENST00000492260 PBRM1Q86U86 1689 aa27.95■■■□□ 2.06
ABCA2-221ENST00000492260 ATP1B4Q9UN42 357 aaPredicted RBP27.95■■■□□ 2.06
ABCA2-221ENST00000492260 THOC2Q8NI27 1593 aaKnown RBP27.94■■■□□ 2.06
ABCA2-221ENST00000492260 CENPBP07199 599 aaPredicted RBP27.94■■■□□ 2.06
ABCA2-221ENST00000492260 MRC2Q9UBG0 1479 aa27.93■■■□□ 2.06
ABCA2-221ENST00000492260 GRIN2BQ13224 1484 aa27.88■■■□□ 2.05
ABCA2-221ENST00000492260 MAPKBP1O60336 1514 aa27.87■■■□□ 2.05
ABCA2-221ENST00000492260 FAM50AQ14320 339 aaKnown RBP27.87■■■□□ 2.05
ABCA2-221ENST00000492260 NEUROD1Q13562 356 aa27.86■■■□□ 2.05
ABCA2-221ENST00000492260 LRRIQ1Q96JM4 1722 aa27.85■■■□□ 2.05
ABCA2-221ENST00000492260 ADAMTS12P58397 1594 aa27.85■■■□□ 2.05
ABCA2-221ENST00000492260 FGD6Q6ZV73 1430 aa27.82■■■□□ 2.04
ABCA2-221ENST00000492260 MTUS2Q5JR59 1369 aa27.81■■■□□ 2.04
ABCA2-221ENST00000492260 MIER1Q8N108 512 aa27.78■■■□□ 2.04
ABCA2-221ENST00000492260 IQGAP2Q13576 1575 aa27.78■■■□□ 2.04
ABCA2-221ENST00000492260 EHBP1L1Q8N3D4 1523 aa27.76■■■□□ 2.03
ABCA2-221ENST00000492260 IFT140Q96RY7 1462 aa27.75■■■□□ 2.03
ABCA2-221ENST00000492260 WDR62O43379 1518 aa27.75■■■□□ 2.03
ABCA2-221ENST00000492260 CCDC18Q5T9S5 1454 aa27.74■■■□□ 2.03
ABCA2-221ENST00000492260 SUPT6HQ7KZ85 1726 aaKnown RBP27.74■■■□□ 2.03
ABCA2-221ENST00000492260 NCOA2Q15596 1464 aa27.72■■■□□ 2.03
ABCA2-221ENST00000492260 MYOM3Q5VTT5 1437 aa27.69■■■□□ 2.02
ABCA2-221ENST00000492260 HECW1Q76N89 1606 aa27.69■■■□□ 2.02
ABCA2-221ENST00000492260 ARHGEF11O15085 1522 aa27.67■■■□□ 2.02
ABCA2-221ENST00000492260 UGGT2Q9NYU1 1516 aa27.65■■■□□ 2.02
ABCA2-221ENST00000492260 TIMELESSQ9UNS1 1208 aa27.62■■■□□ 2.01
ABCA2-221ENST00000492260 HFM1A2PYH4 1435 aa27.62■■■□□ 2.01
ABCA2-221ENST00000492260 ZNF608Q9ULD9 1512 aaPredicted RBP27.61■■■□□ 2.01
ABCA2-221ENST00000492260 MAGI3Q5TCQ9 1506 aa27.6■■■□□ 2.01
ABCA2-221ENST00000492260 PTPN23Q9H3S7 1636 aa27.58■■■□□ 2.01
ABCA2-221ENST00000492260 EPRSP07814 1512 aaKnown RBP27.57■■■□□ 2
ABCA2-221ENST00000492260 PTPRKQ15262 1439 aa27.56■■■□□ 2
ABCA2-221ENST00000492260 KIAA0586Q9BVV6 1533 aa27.55■■■□□ 2
ABCA2-221ENST00000492260 GTF3C3Q9Y5Q9 886 aa27.53■■■□□ 2
ABCA2-221ENST00000492260 TCOF1Q13428 1488 aaKnown RBP27.53■■■□□ 2
ABCA2-221ENST00000492260 EIF4G3O43432 1585 aaKnown RBP27.52■■■□□ 2
ABCA2-221ENST00000492260 UACAQ9BZF9 1416 aa27.51■■□□□ 1.99
ABCA2-221ENST00000492260 YTHDC1Q96MU7 727 aaKnown RBP27.5■■□□□ 1.99
ABCA2-221ENST00000492260 NAIPQ13075 1403 aa27.49■■□□□ 1.99
ABCA2-221ENST00000492260 SIN3AQ96ST3 1273 aa27.48■■□□□ 1.99
ABCA2-221ENST00000492260 KIAA0556O60303 1618 aa27.48■■□□□ 1.99
ABCA2-221ENST00000492260 GRIN2AQ12879 1464 aa27.48■■□□□ 1.99
ABCA2-221ENST00000492260 DISP1Q96F81 1524 aa27.45■■□□□ 1.98
ABCA2-221ENST00000492260 MIA2Q96PC5 1412 aa27.44■■□□□ 1.98
ABCA2-221ENST00000492260 CDK13Q14004 1512 aaKnown RBP27.44■■□□□ 1.98
ABCA2-221ENST00000492260 ERCC6Q03468 1493 aa27.43■■□□□ 1.98
ABCA2-221ENST00000492260 MAGI1Q96QZ7 1491 aaPredicted RBP27.43■■□□□ 1.98
ABCA2-221ENST00000492260 AKNAQ7Z591 1439 aa27.42■■□□□ 1.98
ABCA2-221ENST00000492260 GCC2Q8IWJ2 1684 aa27.4■■□□□ 1.98
ABCA2-221ENST00000492260 PPP1R15AO75807 674 aaPredicted RBP27.36■■□□□ 1.97
ABCA2-221ENST00000492260 RAPGEF6Q8TEU7 1601 aa27.35■■□□□ 1.97
ABCA2-221ENST00000492260 SYNJ2O15056 1496 aa27.33■■□□□ 1.97
ABCA2-221ENST00000492260 NUP153P49790 1475 aaKnown RBP27.32■■□□□ 1.96
ABCA2-221ENST00000492260 TONSLQ96HA7 1378 aa27.29■■□□□ 1.96
ABCA2-221ENST00000492260 CEP170Q5SW79 1584 aa27.28■■□□□ 1.96
ABCA2-221ENST00000492260 PELP1Q8IZL8 1130 aaKnown RBP27.26■■□□□ 1.95
ABCA2-221ENST00000492260 CHMP7Q8WUX9 453 aaPredicted RBP27.22■■□□□ 1.95
ABCA2-221ENST00000492260 CDK11AQ9UQ88 783 aaPredicted RBP27.22■■□□□ 1.95
ABCA2-221ENST00000492260 NUP160Q12769 1436 aa27.21■■□□□ 1.95
ABCA2-221ENST00000492260 RRP7BPQ9NSQ0 103 aa27.21■■□□□ 1.95
ABCA2-221ENST00000492260 ROCK1Q13464 1354 aa27.2■■□□□ 1.94
ABCA2-221ENST00000492260 DNMT1P26358 1616 aaKnown RBP27.19■■□□□ 1.94
ABCA2-221ENST00000492260 ARID3CA6NKF2 412 aa27.18■■□□□ 1.94
ABCA2-221ENST00000492260 CHIC2Q9UKJ5 165 aa27.18■■□□□ 1.94
ABCA2-221ENST00000492260 DAPK1P53355 1430 aa27.16■■□□□ 1.94
ABCA2-221ENST00000492260 KDM6BO15054 1643 aa27.16■■□□□ 1.94
ABCA2-221ENST00000492260 CARMIL2Q6F5E8 1435 aa27.15■■□□□ 1.94
ABCA2-221ENST00000492260 TROQ12816 1431 aaPredicted RBP27.15■■□□□ 1.94
ABCA2-221ENST00000492260 DENND4BO75064 1496 aaPredicted RBP27.15■■□□□ 1.94
ABCA2-221ENST00000492260 KDM5BQ9UGL1 1544 aa27.15■■□□□ 1.94
ABCA2-221ENST00000492260 ADCY10Q96PN6 1610 aa27.12■■□□□ 1.93
ABCA2-221ENST00000492260 ABCC5O15440 1437 aa27.11■■□□□ 1.93
ABCA2-221ENST00000492260 ITSN2Q9NZM3 1697 aa27.1■■□□□ 1.93
ABCA2-221ENST00000492260 PLB1Q6P1J6 1458 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms