RNA–Protein interactions for RNA: ENST00000491541.1

SREBF2-208, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 4,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-208ENST00000491541 AKNAQ7Z591 1439 aa15.36■□□□□ 0.05
SREBF2-208ENST00000491541 TIMELESSQ9UNS1 1208 aa15.35■□□□□ 0.05
SREBF2-208ENST00000491541 FYCO1Q9BQS8 1478 aa15.33■□□□□ 0.04
SREBF2-208ENST00000491541 NCOA2Q15596 1464 aa15.32■□□□□ 0.04
SREBF2-208ENST00000491541 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.29■□□□□ 0.04
SREBF2-208ENST00000491541 PCF11O94913 1555 aaKnown RBP15.28■□□□□ 0.04
SREBF2-208ENST00000491541 TCOF1Q13428 1488 aaKnown RBP15.28■□□□□ 0.04
SREBF2-208ENST00000491541 LRRC9Q6ZRR7 1453 aa15.27■□□□□ 0.04
SREBF2-208ENST00000491541 SNAPC4Q5SXM2 1469 aa15.26■□□□□ 0.03
SREBF2-208ENST00000491541 E9PCH4 1651 aa15.23■□□□□ 0.03
SREBF2-208ENST00000491541 PTPN23Q9H3S7 1636 aa15.23■□□□□ 0.03
SREBF2-208ENST00000491541 FGD5Q6ZNL6 1462 aa15.22■□□□□ 0.03
SREBF2-208ENST00000491541 ABCA10Q8WWZ4 1543 aa15.18■□□□□ 0.02
SREBF2-208ENST00000491541 DNMBPQ6XZF7 1577 aa15.18■□□□□ 0.02
SREBF2-208ENST00000491541 CROCC2H7BZ55 1655 aa15.18■□□□□ 0.02
SREBF2-208ENST00000491541 MIER1Q8N108 512 aa15.15■□□□□ 0.02
SREBF2-208ENST00000491541 ADCY10Q96PN6 1610 aa15.15■□□□□ 0.02
SREBF2-208ENST00000491541 CCDC18Q5T9S5 1454 aa15.15■□□□□ 0.02
SREBF2-208ENST00000491541 SUPT16HQ9Y5B9 1047 aaKnown RBP15.15■□□□□ 0.02
SREBF2-208ENST00000491541 KIF27Q86VH2 1401 aa15.14■□□□□ 0.01
SREBF2-208ENST00000491541 CCNB3Q8WWL7 1395 aa15.14■□□□□ 0.01
SREBF2-208ENST00000491541 ZMYM4Q5VZL5 1548 aa15.14■□□□□ 0.01
SREBF2-208ENST00000491541 CASKIN1Q8WXD9 1431 aa15.13■□□□□ 0.01
SREBF2-208ENST00000491541 DENND4BO75064 1496 aaPredicted RBP15.13■□□□□ 0.01
SREBF2-208ENST00000491541 UGGT2Q9NYU1 1516 aa15.11■□□□□ 0.01
SREBF2-208ENST00000491541 FHAD1B1AJZ9 1412 aa15.1■□□□□ 0.01
SREBF2-208ENST00000491541 SUPT6HQ7KZ85 1726 aaKnown RBP15.1■□□□□ 0.01
SREBF2-208ENST00000491541 GRIN2BQ13224 1484 aa15.1■□□□□ 0.01
SREBF2-208ENST00000491541 LAMC1P11047 1609 aa15.09■□□□□ 0.01
SREBF2-208ENST00000491541 CCER2I3L3R5 266 aa15.09■□□□□ 0.01
SREBF2-208ENST00000491541 HFM1A2PYH4 1435 aa15.08■□□□□ 0.01
SREBF2-208ENST00000491541 ADGBQ8N7X0 1667 aa15.08■□□□□ 0
SREBF2-208ENST00000491541 TSHZ2Q9NRE2 1034 aa15.07■□□□□ 0
SREBF2-208ENST00000491541 ERICH6BQ5W0A0 696 aa15.07■□□□□ 0
SREBF2-208ENST00000491541 EHBP1L1Q8N3D4 1523 aa15.07■□□□□ 0
SREBF2-208ENST00000491541 SETD5Q9C0A6 1442 aa15.05■□□□□ -0
SREBF2-208ENST00000491541 PPP1R15AO75807 674 aaPredicted RBP15.05■□□□□ -0
SREBF2-208ENST00000491541 ANP32EQ9BTT0 268 aa15.05■□□□□ -0
SREBF2-208ENST00000491541 MBD5Q9P267 1494 aa15.05■□□□□ -0
SREBF2-208ENST00000491541 FANCIQ9NVI1 1328 aa15□□□□□ -0.01
SREBF2-208ENST00000491541 KDM5DQ9BY66 1539 aa14.99□□□□□ -0.01
SREBF2-208ENST00000491541 UACAQ9BZF9 1416 aa14.98□□□□□ -0.01
SREBF2-208ENST00000491541 IGF1RP08069 1367 aa14.98□□□□□ -0.01
SREBF2-208ENST00000491541 VIRMAQ69YN4 1812 aaKnown RBP14.98□□□□□ -0.01
SREBF2-208ENST00000491541 TARBP1Q13395 1621 aaKnown RBP14.97□□□□□ -0.01
SREBF2-208ENST00000491541 DNMT1P26358 1616 aaKnown RBP14.97□□□□□ -0.01
SREBF2-208ENST00000491541 PBRM1Q86U86 1689 aa14.97□□□□□ -0.01
SREBF2-208ENST00000491541 GAPVD1Q14C86 1478 aa14.97□□□□□ -0.01
SREBF2-208ENST00000491541 RAB3GAP2Q9H2M9 1393 aa14.95□□□□□ -0.02
SREBF2-208ENST00000491541 INSRP06213 1382 aa14.95□□□□□ -0.02
SREBF2-208ENST00000491541 KIF14Q15058 1648 aa14.94□□□□□ -0.02
SREBF2-208ENST00000491541 LAMC3Q9Y6N6 1575 aa14.94□□□□□ -0.02
SREBF2-208ENST00000491541 SPATA31E1Q6ZUB1 1445 aa14.91□□□□□ -0.02
SREBF2-208ENST00000491541 IQGAP2Q13576 1575 aa14.9□□□□□ -0.02
SREBF2-208ENST00000491541 PHLDB1Q86UU1 1377 aa14.89□□□□□ -0.03
SREBF2-208ENST00000491541 TEX14Q8IWB6 1497 aa14.89□□□□□ -0.03
SREBF2-208ENST00000491541 RNF123Q5XPI4 1314 aa14.88□□□□□ -0.03
SREBF2-208ENST00000491541 NESP48681 1621 aa14.86□□□□□ -0.03
SREBF2-208ENST00000491541 FGD6Q6ZV73 1430 aa14.86□□□□□ -0.03
SREBF2-208ENST00000491541 CEP170Q5SW79 1584 aa14.86□□□□□ -0.03
SREBF2-208ENST00000491541 KDM5CP41229 1560 aa14.86□□□□□ -0.03
SREBF2-208ENST00000491541 MAGI3Q5TCQ9 1506 aa14.85□□□□□ -0.03
SREBF2-208ENST00000491541 WDR62O43379 1518 aa14.85□□□□□ -0.03
SREBF2-208ENST00000491541 BCL11AQ9H165 835 aa14.84□□□□□ -0.03
SREBF2-208ENST00000491541 MYT1LQ9UL68 1186 aa14.84□□□□□ -0.03
SREBF2-208ENST00000491541 NAIPQ13075 1403 aa14.84□□□□□ -0.03
SREBF2-208ENST00000491541 ITSN2Q9NZM3 1697 aa14.84□□□□□ -0.03
SREBF2-208ENST00000491541 ADGRL2O95490 1459 aa14.83□□□□□ -0.03
SREBF2-208ENST00000491541 MIA2Q96PC5 1412 aa14.83□□□□□ -0.04
SREBF2-208ENST00000491541 NCOA1Q15788 1441 aa14.83□□□□□ -0.04
SREBF2-208ENST00000491541 ROCK1Q13464 1354 aa14.81□□□□□ -0.04
SREBF2-208ENST00000491541 NEURL4Q96JN8 1562 aa14.8□□□□□ -0.04
SREBF2-208ENST00000491541 KDM6BO15054 1643 aa14.8□□□□□ -0.04
SREBF2-208ENST00000491541 ARHGEF12Q9NZN5 1544 aa14.79□□□□□ -0.04
SREBF2-208ENST00000491541 ADAMTS12P58397 1594 aa14.79□□□□□ -0.04
SREBF2-208ENST00000491541 FMN1Q68DA7 1419 aa14.79□□□□□ -0.04
SREBF2-208ENST00000491541 KANK4Q5T7N3 995 aaPredicted RBP14.78□□□□□ -0.04
SREBF2-208ENST00000491541 TOPBP1Q92547 1522 aa14.78□□□□□ -0.04
SREBF2-208ENST00000491541 RNF17Q9BXT8 1623 aaKnown RBP14.77□□□□□ -0.04
SREBF2-208ENST00000491541 PTPRKQ15262 1439 aa14.77□□□□□ -0.04
SREBF2-208ENST00000491541 MYOM3Q5VTT5 1437 aa14.76□□□□□ -0.05
SREBF2-208ENST00000491541 UHRF1BP1Q6BDS2 1440 aa14.76□□□□□ -0.05
SREBF2-208ENST00000491541 BCORL1Q5H9F3 1711 aa14.76□□□□□ -0.05
SREBF2-208ENST00000491541 CADPSQ9ULU8 1353 aa14.74□□□□□ -0.05
SREBF2-208ENST00000491541 RPRD2Q5VT52 1461 aaKnown RBP14.74□□□□□ -0.05
SREBF2-208ENST00000491541 POLA1P09884 1462 aaPredicted RBP14.73□□□□□ -0.05
SREBF2-208ENST00000491541 CLASP1Q7Z460 1538 aa14.73□□□□□ -0.05
SREBF2-208ENST00000491541 CDC42BPAQ5VT25 1732 aa14.72□□□□□ -0.05
SREBF2-208ENST00000491541 RANGAP1P46060 587 aaPredicted RBP14.72□□□□□ -0.05
SREBF2-208ENST00000491541 CNTLNQ9NXG0 1405 aa14.72□□□□□ -0.05
SREBF2-208ENST00000491541 MAST1Q9Y2H9 1570 aa14.71□□□□□ -0.05
SREBF2-208ENST00000491541 SHANK2Q9UPX8 1470 aa14.7□□□□□ -0.06
SREBF2-208ENST00000491541 BCANQ96GW7 911 aa14.69□□□□□ -0.06
SREBF2-208ENST00000491541 HNRNPUL2Q1KMD3 747 aaKnown RBP14.67□□□□□ -0.06
SREBF2-208ENST00000491541 CARMIL1Q5VZK9 1371 aa14.66□□□□□ -0.06
SREBF2-208ENST00000491541 TRPM1Q7Z4N2 1603 aa14.66□□□□□ -0.06
SREBF2-208ENST00000491541 UNC13BO14795 1591 aa14.66□□□□□ -0.06
SREBF2-208ENST00000491541 ARHGEF5Q12774 1597 aa14.66□□□□□ -0.06
SREBF2-208ENST00000491541 SMG6Q86US8 1419 aaKnown RBP14.65□□□□□ -0.06
SREBF2-208ENST00000491541 ABCC10Q5T3U5 1492 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms