RNA–Protein interactions for RNA: ENST00000491541.1

SREBF2-208, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 4,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-208ENST00000491541 NISCHQ9Y2I1 1504 aa21.7■■□□□ 1.06
SREBF2-208ENST00000491541 CCDC180Q9P1Z9 1646 aa19.16■□□□□ 0.66
SREBF2-208ENST00000491541 DCAF1Q9Y4B6 1507 aa18.72■□□□□ 0.59
SREBF2-208ENST00000491541 ZCCHC6Q5VYS8 1495 aaKnown RBP18.72■□□□□ 0.59
SREBF2-208ENST00000491541 MYO15BQ96JP2 1530 aa18.16■□□□□ 0.5
SREBF2-208ENST00000491541 ABCC9O60706 1549 aa17.88■□□□□ 0.45
SREBF2-208ENST00000491541 EIF4G1Q04637 1599 aaKnown RBP17.65■□□□□ 0.42
SREBF2-208ENST00000491541 HRCP23327 699 aa17.63■□□□□ 0.41
SREBF2-208ENST00000491541 RB1CC1Q8TDY2 1594 aa17.38■□□□□ 0.37
SREBF2-208ENST00000491541 CHIC1Q5VXU3 224 aa17.31■□□□□ 0.36
SREBF2-208ENST00000491541 BAZ1AQ9NRL2 1556 aaPredicted RBP17.1■□□□□ 0.33
SREBF2-208ENST00000491541 NACADO15069 1562 aa17.05■□□□□ 0.32
SREBF2-208ENST00000491541 PELP1Q8IZL8 1130 aaKnown RBP17.03■□□□□ 0.32
SREBF2-208ENST00000491541 RSF1Q96T23 1441 aaPredicted RBP17■□□□□ 0.31
SREBF2-208ENST00000491541 WRNQ14191 1432 aaPredicted RBP eCLIP16.96■□□□□ 0.31
SREBF2-208ENST00000491541 PEG3Q9GZU2 1588 aa16.9■□□□□ 0.3
SREBF2-208ENST00000491541 ZEB1P37275 1124 aaPredicted RBP16.81■□□□□ 0.28
SREBF2-208ENST00000491541 TRIM26Q12899 539 aaPredicted RBP16.76■□□□□ 0.27
SREBF2-208ENST00000491541 UNC13AQ9UPW8 1703 aa16.75■□□□□ 0.27
SREBF2-208ENST00000491541 DCAF8L2P0C7V8 631 aa16.72■□□□□ 0.27
SREBF2-208ENST00000491541 TOP2AP11388 1531 aaKnown RBP16.72■□□□□ 0.27
SREBF2-208ENST00000491541 SHROOM4Q9ULL8 1493 aa16.71■□□□□ 0.27
SREBF2-208ENST00000491541 KIF21BO75037 1637 aa16.64■□□□□ 0.25
SREBF2-208ENST00000491541 WIZO95785 1651 aa16.59■□□□□ 0.25
SREBF2-208ENST00000491541 PCGF6Q9BYE7 350 aa16.58■□□□□ 0.24
SREBF2-208ENST00000491541 MROH2BQ7Z745 1585 aa16.58■□□□□ 0.24
SREBF2-208ENST00000491541 SCRIBQ14160 1630 aa16.58■□□□□ 0.24
SREBF2-208ENST00000491541 SMARCA2P51531 1590 aa16.57■□□□□ 0.24
SREBF2-208ENST00000491541 SUPT5HO00267 1087 aaKnown RBP16.57■□□□□ 0.24
SREBF2-208ENST00000491541 SMARCA4P51532 1647 aa16.56■□□□□ 0.24
SREBF2-208ENST00000491541 PPARGC1BQ86YN6 1023 aaKnown RBP16.54■□□□□ 0.24
SREBF2-208ENST00000491541 EEA1Q15075 1411 aa16.54■□□□□ 0.24
SREBF2-208ENST00000491541 MYT1Q01538 1121 aa16.5■□□□□ 0.23
SREBF2-208ENST00000491541 PRDM2Q13029 1718 aa16.43■□□□□ 0.22
SREBF2-208ENST00000491541 BIVM-ERCC5R4GMW8 1640 aa16.43■□□□□ 0.22
SREBF2-208ENST00000491541 CUX2O14529 1486 aa16.4■□□□□ 0.22
SREBF2-208ENST00000491541 BAZ1BQ9UIG0 1483 aaKnown RBP16.37■□□□□ 0.21
SREBF2-208ENST00000491541 SCAF1Q9H7N4 1312 aaKnown RBP16.29■□□□□ 0.2
SREBF2-208ENST00000491541 TNIKQ9UKE5 1360 aa16.28■□□□□ 0.2
SREBF2-208ENST00000491541 CECR2Q9BXF3 1484 aa16.28■□□□□ 0.2
SREBF2-208ENST00000491541 ERICH3Q5RHP9 1530 aa16.25■□□□□ 0.19
SREBF2-208ENST00000491541 SYNJ1O43426 1573 aa16.21■□□□□ 0.19
SREBF2-208ENST00000491541 BICRAQ9NZM4 1560 aa16.2■□□□□ 0.18
SREBF2-208ENST00000491541 MAP3K1Q13233 1512 aa16.17■□□□□ 0.18
SREBF2-208ENST00000491541 TOP2BQ02880 1626 aa16.16■□□□□ 0.18
SREBF2-208ENST00000491541 TRIM41Q8WV44 630 aa16.15■□□□□ 0.18
SREBF2-208ENST00000491541 CCDC88BA6NC98 1476 aa16.13■□□□□ 0.17
SREBF2-208ENST00000491541 CLSPNQ9HAW4 1339 aa16.08■□□□□ 0.17
SREBF2-208ENST00000491541 LOC105371045A0A1W2PR82 267 aa16.06■□□□□ 0.16
SREBF2-208ENST00000491541 ACIN1Q9UKV3 1341 aaKnown RBP16.06■□□□□ 0.16
SREBF2-208ENST00000491541 GOLGA3Q08378 1498 aa16.05■□□□□ 0.16
SREBF2-208ENST00000491541 CEP162Q5TB80 1403 aa16.03■□□□□ 0.16
SREBF2-208ENST00000491541 ABCC8Q09428 1581 aa16.01■□□□□ 0.15
SREBF2-208ENST00000491541 CFAP43Q8NDM7 1665 aa15.99■□□□□ 0.15
SREBF2-208ENST00000491541 CEP164Q9UPV0 1460 aa15.98■□□□□ 0.15
SREBF2-208ENST00000491541 HMGXB3Q12766 1538 aa15.95■□□□□ 0.14
SREBF2-208ENST00000491541 RRBP1Q9P2E9 1410 aaKnown RBP15.91■□□□□ 0.14
SREBF2-208ENST00000491541 PRXQ9BXM0 1461 aa15.89■□□□□ 0.13
SREBF2-208ENST00000491541 VPS8Q8N3P4 1428 aa15.88■□□□□ 0.13
SREBF2-208ENST00000491541 POLR1AO95602 1720 aaPredicted RBP15.86■□□□□ 0.13
SREBF2-208ENST00000491541 TTBK1Q5TCY1 1321 aaPredicted RBP15.84■□□□□ 0.13
SREBF2-208ENST00000491541 KIF21AQ7Z4S6 1674 aa15.81■□□□□ 0.12
SREBF2-208ENST00000491541 ARAP1Q96P48 1450 aa15.76■□□□□ 0.11
SREBF2-208ENST00000491541 SOGA1O94964 1423 aa15.74■□□□□ 0.11
SREBF2-208ENST00000491541 NEUROD1Q13562 356 aa15.73■□□□□ 0.11
SREBF2-208ENST00000491541 CLIP1P30622 1438 aa15.73■□□□□ 0.11
SREBF2-208ENST00000491541 WDR97A6NE52 1622 aa15.73■□□□□ 0.11
SREBF2-208ENST00000491541 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.69■□□□□ 0.11e-7■■■■■ 104
SREBF2-208ENST00000491541 MAPKBP1O60336 1514 aa15.69■□□□□ 0.1
SREBF2-208ENST00000491541 RUSC2Q8N2Y8 1516 aa15.68■□□□□ 0.1
SREBF2-208ENST00000491541 ABCA5Q8WWZ7 1642 aa15.67■□□□□ 0.1
SREBF2-208ENST00000491541 ATAD2BQ9ULI0 1458 aa15.66■□□□□ 0.1
SREBF2-208ENST00000491541 EHMT2Q96KQ7 1210 aa15.64■□□□□ 0.09
SREBF2-208ENST00000491541 THOC2Q8NI27 1593 aaKnown RBP15.62■□□□□ 0.09
SREBF2-208ENST00000491541 AQRO60306 1485 aaKnown RBP eCLIP15.61■□□□□ 0.091e-7■■■■■ 33.3
SREBF2-208ENST00000491541 TIAM1Q13009 1591 aa15.61■□□□□ 0.09
SREBF2-208ENST00000491541 ZNF316A6NFI3 1004 aaPredicted RBP15.58■□□□□ 0.08
SREBF2-208ENST00000491541 KDM5BQ9UGL1 1544 aa15.58■□□□□ 0.08
SREBF2-208ENST00000491541 CTTNBP2Q8WZ74 1663 aa15.57■□□□□ 0.08
SREBF2-208ENST00000491541 DHX57Q6P158 1386 aaKnown RBP15.56■□□□□ 0.08
SREBF2-208ENST00000491541 CC2D2AQ9P2K1 1620 aa15.56■□□□□ 0.08
SREBF2-208ENST00000491541 CENPBP07199 599 aaPredicted RBP15.56■□□□□ 0.08
SREBF2-208ENST00000491541 GCC2Q8IWJ2 1684 aa15.55■□□□□ 0.08
SREBF2-208ENST00000491541 LRRIQ1Q96JM4 1722 aa15.54■□□□□ 0.08
SREBF2-208ENST00000491541 DIEXFQ68CQ4 756 aaKnown RBP15.54■□□□□ 0.08
SREBF2-208ENST00000491541 GTF3C3Q9Y5Q9 886 aa15.54■□□□□ 0.08
SREBF2-208ENST00000491541 NCAPD3P42695 1498 aa15.53■□□□□ 0.08
SREBF2-208ENST00000491541 ARHGEF11O15085 1522 aa15.53■□□□□ 0.08
SREBF2-208ENST00000491541 CUX1P39880 1505 aa15.52■□□□□ 0.08
SREBF2-208ENST00000491541 RAPGEF2Q9Y4G8 1499 aa15.52■□□□□ 0.07
SREBF2-208ENST00000491541 SAMD9Q5K651 1589 aa15.5■□□□□ 0.07
SREBF2-208ENST00000491541 EFCAB5A4FU69 1503 aa15.5■□□□□ 0.07
SREBF2-208ENST00000491541 CUL7Q14999 1698 aa15.49■□□□□ 0.07
SREBF2-208ENST00000491541 CFTRP13569 1480 aa15.47■□□□□ 0.07
SREBF2-208ENST00000491541 HECW1Q76N89 1606 aa15.46■□□□□ 0.07
SREBF2-208ENST00000491541 FAM9AQ8IZU1 332 aaPredicted RBP15.45■□□□□ 0.06
SREBF2-208ENST00000491541 CSRNP3Q8WYN3 585 aa15.44■□□□□ 0.06
SREBF2-208ENST00000491541 ARHGAP35Q9NRY4 1499 aa15.42■□□□□ 0.06
SREBF2-208ENST00000491541 YTHDC1Q96MU7 727 aaKnown RBP15.4■□□□□ 0.06
SREBF2-208ENST00000491541 CCER1Q8TC90 406 aaPredicted RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms