RNA–Protein interactions for RNA: ENST00000491445.1

NCBP1-204, Transcript of nuclear cap binding protein subunit 1, humanhuman

TSL 3

Gene NCBP1, Length 300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP1-204ENST00000491445 SYNJ2O15056 1496 aa13.48□□□□□ -0.25
NCBP1-204ENST00000491445 TDRD9Q8NDG6 1382 aaKnown RBP13.47□□□□□ -0.25
NCBP1-204ENST00000491445 SOGA1O94964 1423 aa13.47□□□□□ -0.25
NCBP1-204ENST00000491445 RAD54L2Q9Y4B4 1467 aa13.46□□□□□ -0.25
NCBP1-204ENST00000491445 GRIN2BQ13224 1484 aa13.45□□□□□ -0.26
NCBP1-204ENST00000491445 KCNA4P22459 653 aa13.39□□□□□ -0.27
NCBP1-204ENST00000491445 KIF13AQ9H1H9 1805 aa13.37□□□□□ -0.27
NCBP1-204ENST00000491445 FGD5Q6ZNL6 1462 aa13.36□□□□□ -0.27
NCBP1-204ENST00000491445 KDM4FA0A1W2PPD8 638 aa13.34□□□□□ -0.27
NCBP1-204ENST00000491445 ERCC6L2Q5T890 1561 aa13.33□□□□□ -0.28
NCBP1-204ENST00000491445 U3KPZ7 1027 aaPredicted RBP13.31□□□□□ -0.28
NCBP1-204ENST00000491445 CEP170Q5SW79 1584 aa13.3□□□□□ -0.28
NCBP1-204ENST00000491445 PBRM1Q86U86 1689 aa13.3□□□□□ -0.28
NCBP1-204ENST00000491445 SHROOM2Q13796 1616 aa13.29□□□□□ -0.28
NCBP1-204ENST00000491445 NUP160Q12769 1436 aa13.29□□□□□ -0.28
NCBP1-204ENST00000491445 ABCC10Q5T3U5 1492 aa13.28□□□□□ -0.28
NCBP1-204ENST00000491445 CUX1P39880 1505 aa13.28□□□□□ -0.28
NCBP1-204ENST00000491445 GRIN2AQ12879 1464 aa13.27□□□□□ -0.29
NCBP1-204ENST00000491445 ABCA5Q8WWZ7 1642 aa13.26□□□□□ -0.29
NCBP1-204ENST00000491445 ABCA10Q8WWZ4 1543 aa13.24□□□□□ -0.29
NCBP1-204ENST00000491445 MAPKBP1O60336 1514 aa13.23□□□□□ -0.29
NCBP1-204ENST00000491445 KDM6BO15054 1643 aa13.21□□□□□ -0.3
NCBP1-204ENST00000491445 FAM69CQ0P6D2 419 aa13.2□□□□□ -0.3
NCBP1-204ENST00000491445 DIP2BQ9P265 1576 aa13.2□□□□□ -0.3
NCBP1-204ENST00000491445 ADAMTS12P58397 1594 aa13.18□□□□□ -0.3
NCBP1-204ENST00000491445 FHAD1B1AJZ9 1412 aa13.14□□□□□ -0.31
NCBP1-204ENST00000491445 CAPN15O75808 1086 aa13.14□□□□□ -0.31
NCBP1-204ENST00000491445 SPINK5Q9NQ38 1064 aaPredicted RBP13.14□□□□□ -0.31
NCBP1-204ENST00000491445 PRG4Q92954 1404 aaPredicted RBP13.13□□□□□ -0.31
NCBP1-204ENST00000491445 SLC4A2P04920 1241 aa13.12□□□□□ -0.31
NCBP1-204ENST00000491445 NPM1P06748 294 aaKnown RBP eCLIP13.11□□□□□ -0.31
NCBP1-204ENST00000491445 HECW2Q9P2P5 1572 aa13.09□□□□□ -0.31
NCBP1-204ENST00000491445 DSG3P32926 999 aa13.08□□□□□ -0.32
NCBP1-204ENST00000491445 JPH4Q96JJ6 628 aa13.08□□□□□ -0.32
NCBP1-204ENST00000491445 ADGRL1O94910 1474 aa13.08□□□□□ -0.32
NCBP1-204ENST00000491445 ADCY10Q96PN6 1610 aa13.07□□□□□ -0.32
NCBP1-204ENST00000491445 ERICH3Q5RHP9 1530 aa13.07□□□□□ -0.32
NCBP1-204ENST00000491445 WRNQ14191 1432 aaPredicted RBP eCLIP13.05□□□□□ -0.32
NCBP1-204ENST00000491445 FBXO41Q8TF61 875 aa13.04□□□□□ -0.32
NCBP1-204ENST00000491445 APLP2Q06481 763 aa13.02□□□□□ -0.33
NCBP1-204ENST00000491445 RUSC2Q8N2Y8 1516 aa13.01□□□□□ -0.33
NCBP1-204ENST00000491445 TSPOAP1O95153 1857 aa13□□□□□ -0.33
NCBP1-204ENST00000491445 GLI2P10070 1586 aa12.99□□□□□ -0.33
NCBP1-204ENST00000491445 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.98□□□□□ -0.33
NCBP1-204ENST00000491445 HNRNPUL2Q1KMD3 747 aaKnown RBP12.98□□□□□ -0.33
NCBP1-204ENST00000491445 PPRC1Q5VV67 1664 aaKnown RBP12.97□□□□□ -0.33
NCBP1-204ENST00000491445 BIVM-ERCC5R4GMW8 1640 aa12.94□□□□□ -0.34
NCBP1-204ENST00000491445 COL17A1Q9UMD9 1497 aaPredicted RBP12.93□□□□□ -0.34
NCBP1-204ENST00000491445 TOP2BQ02880 1626 aa12.93□□□□□ -0.34
NCBP1-204ENST00000491445 PLB1Q6P1J6 1458 aa12.92□□□□□ -0.34
NCBP1-204ENST00000491445 ZNF219Q9P2Y4 722 aaPredicted RBP12.92□□□□□ -0.34
NCBP1-204ENST00000491445 KIAA0586Q9BVV6 1533 aa12.91□□□□□ -0.34
NCBP1-204ENST00000491445 ABCC2Q92887 1545 aa12.9□□□□□ -0.34
NCBP1-204ENST00000491445 ASXL2Q76L83 1435 aa12.88□□□□□ -0.35
NCBP1-204ENST00000491445 SAMD1Q6SPF0 538 aaPredicted RBP12.88□□□□□ -0.35
NCBP1-204ENST00000491445 TEX14Q8IWB6 1497 aa12.87□□□□□ -0.35
NCBP1-204ENST00000491445 MAP3K4Q9Y6R4 1608 aa12.86□□□□□ -0.35
NCBP1-204ENST00000491445 PTPRGP23470 1445 aa12.86□□□□□ -0.35
NCBP1-204ENST00000491445 UHRF1BP1LA0JNW5 1464 aa12.85□□□□□ -0.35
NCBP1-204ENST00000491445 LMTK3Q96Q04 1460 aa12.82□□□□□ -0.36
NCBP1-204ENST00000491445 EPRSP07814 1512 aaKnown RBP12.82□□□□□ -0.36
NCBP1-204ENST00000491445 ABCB7O75027 752 aa12.81□□□□□ -0.36
NCBP1-204ENST00000491445 TNIKQ9UKE5 1360 aa12.81□□□□□ -0.36
NCBP1-204ENST00000491445 KDM5BQ9UGL1 1544 aa12.78□□□□□ -0.36
NCBP1-204ENST00000491445 CARMIL2Q6F5E8 1435 aa12.77□□□□□ -0.37
NCBP1-204ENST00000491445 CUL7Q14999 1698 aa12.77□□□□□ -0.37
NCBP1-204ENST00000491445 UACAQ9BZF9 1416 aa12.76□□□□□ -0.37
NCBP1-204ENST00000491445 SOCS7O14512 581 aa12.75□□□□□ -0.37
NCBP1-204ENST00000491445 MYCNP04198 464 aaPredicted RBP12.75□□□□□ -0.37
NCBP1-204ENST00000491445 MAGI3Q5TCQ9 1506 aa12.73□□□□□ -0.37
NCBP1-204ENST00000491445 IGF1RP08069 1367 aa12.73□□□□□ -0.37
NCBP1-204ENST00000491445 PTPRMP28827 1452 aa12.7□□□□□ -0.38
NCBP1-204ENST00000491445 ADAMTSL3P82987 1691 aa12.69□□□□□ -0.38
NCBP1-204ENST00000491445 WDR7Q9Y4E6 1490 aa12.68□□□□□ -0.38
NCBP1-204ENST00000491445 ZCCHC11Q5TAX3 1644 aaKnown RBP12.68□□□□□ -0.38
NCBP1-204ENST00000491445 PCF11O94913 1555 aaKnown RBP12.68□□□□□ -0.38
NCBP1-204ENST00000491445 KIF21BO75037 1637 aa12.67□□□□□ -0.38
NCBP1-204ENST00000491445 DISP1Q96F81 1524 aa12.67□□□□□ -0.38
NCBP1-204ENST00000491445 IQGAP2Q13576 1575 aa12.66□□□□□ -0.38
NCBP1-204ENST00000491445 SLC4A1APQ9BWU0 796 aaKnown RBP12.66□□□□□ -0.38
NCBP1-204ENST00000491445 CFAP43Q8NDM7 1665 aa12.66□□□□□ -0.38
NCBP1-204ENST00000491445 KIF27Q86VH2 1401 aa12.65□□□□□ -0.38
NCBP1-204ENST00000491445 POTEHQ6S545 545 aa12.65□□□□□ -0.38
NCBP1-204ENST00000491445 ILDR2Q71H61 639 aa12.65□□□□□ -0.38
NCBP1-204ENST00000491445 ARAP3Q8WWN8 1544 aa12.65□□□□□ -0.38
NCBP1-204ENST00000491445 CD109Q6YHK3 1445 aa12.64□□□□□ -0.39
NCBP1-204ENST00000491445 CARMIL1Q5VZK9 1371 aa12.61□□□□□ -0.39
NCBP1-204ENST00000491445 UGGT2Q9NYU1 1516 aa12.61□□□□□ -0.39
NCBP1-204ENST00000491445 TTBK1Q5TCY1 1321 aaPredicted RBP12.61□□□□□ -0.39
NCBP1-204ENST00000491445 DISP3Q9P2K9 1392 aa12.6□□□□□ -0.39
NCBP1-204ENST00000491445 CERKQ8TCT0 537 aa12.6□□□□□ -0.39
NCBP1-204ENST00000491445 PHLDB1Q86UU1 1377 aa12.59□□□□□ -0.39
NCBP1-204ENST00000491445 BCORL1Q5H9F3 1711 aa12.57□□□□□ -0.4
NCBP1-204ENST00000491445 FOXD4L1Q9NU39 408 aa12.56□□□□□ -0.4
NCBP1-204ENST00000491445 KIAA0556O60303 1618 aa12.55□□□□□ -0.4
NCBP1-204ENST00000491445 POLA2Q14181 598 aa12.54□□□□□ -0.4
NCBP1-204ENST00000491445 MADDQ8WXG6 1647 aa12.54□□□□□ -0.4
NCBP1-204ENST00000491445 RBM42Q9BTD8 480 aaKnown RBP12.53□□□□□ -0.4
NCBP1-204ENST00000491445 ABCA8O94911 1581 aa12.51□□□□□ -0.41
NCBP1-204ENST00000491445 SPATA31D1Q6ZQQ2 1576 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms