RNA–Protein interactions for RNA: ENST00000491292.5

ERCC3-208, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 4,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-208ENST00000491292 MRS2Q9HD23 443 aa13.51□□□□□ -0.25
ERCC3-208ENST00000491292 ANP32AP39687 249 aaKnown RBP13.5□□□□□ -0.25
ERCC3-208ENST00000491292 ARID3CA6NKF2 412 aa13.5□□□□□ -0.25
ERCC3-208ENST00000491292 CHIC2Q9UKJ5 165 aa13.49□□□□□ -0.25
ERCC3-208ENST00000491292 SALL2Q9Y467 1007 aaPredicted RBP13.49□□□□□ -0.25
ERCC3-208ENST00000491292 CCDC136Q96JN2 1154 aa13.47□□□□□ -0.25
ERCC3-208ENST00000491292 TOP2AP11388 1531 aaKnown RBP13.46□□□□□ -0.26
ERCC3-208ENST00000491292 CCER2I3L3R5 266 aa13.46□□□□□ -0.26
ERCC3-208ENST00000491292 PPP4R2Q9NY27 417 aa13.46□□□□□ -0.26
ERCC3-208ENST00000491292 ZBTB47Q9UFB7 747 aaPredicted RBP13.45□□□□□ -0.26
ERCC3-208ENST00000491292 BAZ1BQ9UIG0 1483 aaKnown RBP13.44□□□□□ -0.26
ERCC3-208ENST00000491292 NOP58Q9Y2X3 529 aaKnown RBP13.44□□□□□ -0.26
ERCC3-208ENST00000491292 PPP1R15AO75807 674 aaPredicted RBP13.43□□□□□ -0.26
ERCC3-208ENST00000491292 EIF5BO60841 1220 aaKnown RBP13.42□□□□□ -0.26
ERCC3-208ENST00000491292 SMARCA2P51531 1590 aa13.41□□□□□ -0.26
ERCC3-208ENST00000491292 RRP7BPQ9NSQ0 103 aa13.41□□□□□ -0.26
ERCC3-208ENST00000491292 SETD5Q9C0A6 1442 aa13.4□□□□□ -0.26
ERCC3-208ENST00000491292 LAS1LQ9Y4W2 734 aaKnown RBP13.4□□□□□ -0.26
ERCC3-208ENST00000491292 DAXXQ9UER7 740 aaPredicted RBP13.4□□□□□ -0.26
ERCC3-208ENST00000491292 KIF21BO75037 1637 aa13.4□□□□□ -0.26
ERCC3-208ENST00000491292 MYT1LQ9UL68 1186 aa13.37□□□□□ -0.27
ERCC3-208ENST00000491292 FANCIQ9NVI1 1328 aa13.36□□□□□ -0.27
ERCC3-208ENST00000491292 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.36□□□□□ -0.27
ERCC3-208ENST00000491292 EIF4G2P78344 907 aaKnown RBP eCLIP13.35□□□□□ -0.27
ERCC3-208ENST00000491292 HSPA5P11021 654 aaKnown RBP13.35□□□□□ -0.27
ERCC3-208ENST00000491292 PAK3O75914 559 aaPredicted RBP13.34□□□□□ -0.27
ERCC3-208ENST00000491292 ANO8Q9HCE9 1232 aaPredicted RBP13.33□□□□□ -0.28
ERCC3-208ENST00000491292 FOXD1Q16676 465 aa13.32□□□□□ -0.28
ERCC3-208ENST00000491292 CCDC184Q52MB2 194 aa13.31□□□□□ -0.28
ERCC3-208ENST00000491292 WDR97A6NE52 1622 aa13.3□□□□□ -0.28
ERCC3-208ENST00000491292 SMARCA4P51532 1647 aa13.3□□□□□ -0.28
ERCC3-208ENST00000491292 SYNJ1O43426 1573 aa13.29□□□□□ -0.28
ERCC3-208ENST00000491292 ARAP1Q96P48 1450 aa13.29□□□□□ -0.28
ERCC3-208ENST00000491292 NEFMP07197 916 aa13.28□□□□□ -0.28
ERCC3-208ENST00000491292 KIF27Q86VH2 1401 aa13.28□□□□□ -0.28
ERCC3-208ENST00000491292 TMC1Q8TDI8 760 aa13.26□□□□□ -0.29
ERCC3-208ENST00000491292 PRKCSHP14314 528 aaPredicted RBP13.26□□□□□ -0.29
ERCC3-208ENST00000491292 MTUS2Q5JR59 1369 aa13.26□□□□□ -0.29
ERCC3-208ENST00000491292 TIMELESSQ9UNS1 1208 aa13.24□□□□□ -0.29
ERCC3-208ENST00000491292 PHLDB1Q86UU1 1377 aa13.23□□□□□ -0.29
ERCC3-208ENST00000491292 IL27Q8NEV9 243 aa13.23□□□□□ -0.29
ERCC3-208ENST00000491292 RRBP1Q9P2E9 1410 aaKnown RBP13.22□□□□□ -0.29
ERCC3-208ENST00000491292 EIF4G1Q04637 1599 aaKnown RBP13.22□□□□□ -0.29
ERCC3-208ENST00000491292 ARXQ96QS3 562 aa13.22□□□□□ -0.29
ERCC3-208ENST00000491292 IPO9Q96P70 1041 aaKnown RBP13.21□□□□□ -0.3
ERCC3-208ENST00000491292 WASHC2AQ641Q2 1341 aa13.18□□□□□ -0.3
ERCC3-208ENST00000491292 KDM2AQ9Y2K7 1162 aa13.18□□□□□ -0.3
ERCC3-208ENST00000491292 PRKRIP1Q9H875 184 aaPredicted RBP13.17□□□□□ -0.3
ERCC3-208ENST00000491292 L3MBTL2Q969R5 705 aa13.17□□□□□ -0.3
ERCC3-208ENST00000491292 ZNF777Q9ULD5 760 aaPredicted RBP13.16□□□□□ -0.3
ERCC3-208ENST00000491292 CUX2O14529 1486 aa13.15□□□□□ -0.3
ERCC3-208ENST00000491292 CARMIL1Q5VZK9 1371 aa13.15□□□□□ -0.3
ERCC3-208ENST00000491292 ERICH6BQ5W0A0 696 aa13.15□□□□□ -0.3
ERCC3-208ENST00000491292 SLC4A1APQ9BWU0 796 aaKnown RBP13.14□□□□□ -0.31
ERCC3-208ENST00000491292 SLC4A3P48751 1232 aa13.13□□□□□ -0.31
ERCC3-208ENST00000491292 BICRAQ9NZM4 1560 aa13.13□□□□□ -0.31
ERCC3-208ENST00000491292 ARHGAP35Q9NRY4 1499 aa13.12□□□□□ -0.31
ERCC3-208ENST00000491292 FHOD3Q2V2M9 1422 aa13.12□□□□□ -0.31
ERCC3-208ENST00000491292 MAPKBP1O60336 1514 aa13.11□□□□□ -0.31
ERCC3-208ENST00000491292 AKNAQ7Z591 1439 aa13.1□□□□□ -0.31
ERCC3-208ENST00000491292 NUDCQ9Y266 331 aa13.09□□□□□ -0.31
ERCC3-208ENST00000491292 UNC13AQ9UPW8 1703 aa13.09□□□□□ -0.31
ERCC3-208ENST00000491292 ZBED9Q6R2W3 1325 aa13.09□□□□□ -0.31
ERCC3-208ENST00000491292 C11orf95C9JLR9 678 aaPredicted RBP13.09□□□□□ -0.31
ERCC3-208ENST00000491292 ATAD2BQ9ULI0 1458 aa13.09□□□□□ -0.31
ERCC3-208ENST00000491292 EXOC6Q8TAG9 804 aa13.08□□□□□ -0.32
ERCC3-208ENST00000491292 MPHOSPH9Q99550 1183 aa13.07□□□□□ -0.32
ERCC3-208ENST00000491292 PRXQ9BXM0 1461 aa13.06□□□□□ -0.32
ERCC3-208ENST00000491292 FHAD1B1AJZ9 1412 aa13.06□□□□□ -0.32
ERCC3-208ENST00000491292 PLIN1O60240 522 aa13.05□□□□□ -0.32
ERCC3-208ENST00000491292 SKAP1Q86WV1 359 aa13.05□□□□□ -0.32
ERCC3-208ENST00000491292 RGS3P49796 1198 aa13.05□□□□□ -0.32
ERCC3-208ENST00000491292 CCDC18Q5T9S5 1454 aa13.05□□□□□ -0.32
ERCC3-208ENST00000491292 LRRC9Q6ZRR7 1453 aa13.05□□□□□ -0.32
ERCC3-208ENST00000491292 PPM1GO15355 546 aaPredicted RBP13.04□□□□□ -0.32
ERCC3-208ENST00000491292 PDE4AP27815 886 aa13.04□□□□□ -0.32
ERCC3-208ENST00000491292 BRPF3Q9ULD4 1205 aa13.03□□□□□ -0.32
ERCC3-208ENST00000491292 RCAN3Q9UKA8 241 aa13.01□□□□□ -0.33
ERCC3-208ENST00000491292 IGF1RP08069 1367 aa13.01□□□□□ -0.33
ERCC3-208ENST00000491292 KIF7Q2M1P5 1343 aa13□□□□□ -0.33
ERCC3-208ENST00000491292 CARD11Q9BXL7 1154 aa13□□□□□ -0.33
ERCC3-208ENST00000491292 CCDC7Q96M83 1385 aa12.99□□□□□ -0.33
ERCC3-208ENST00000491292 CC2D1BQ5T0F9 858 aaKnown RBP12.99□□□□□ -0.33
ERCC3-208ENST00000491292 NBPF8Q3BBV2 869 aa12.98□□□□□ -0.33
ERCC3-208ENST00000491292 FMN1Q68DA7 1419 aa12.98□□□□□ -0.33
ERCC3-208ENST00000491292 RGL3Q3MIN7 710 aa12.97□□□□□ -0.33
ERCC3-208ENST00000491292 CNTLNQ9NXG0 1405 aa12.97□□□□□ -0.33
ERCC3-208ENST00000491292 TCERG1O14776 1098 aaKnown RBP12.97□□□□□ -0.33
ERCC3-208ENST00000491292 DDRGK1Q96HY6 314 aa12.97□□□□□ -0.33
ERCC3-208ENST00000491292 ERICH3Q5RHP9 1530 aa12.96□□□□□ -0.33
ERCC3-208ENST00000491292 CANXP27824 592 aaKnown RBP12.95□□□□□ -0.34
ERCC3-208ENST00000491292 UACAQ9BZF9 1416 aa12.94□□□□□ -0.34
ERCC3-208ENST00000491292 FGD6Q6ZV73 1430 aa12.94□□□□□ -0.34
ERCC3-208ENST00000491292 TIAM1Q13009 1591 aa12.93□□□□□ -0.34
ERCC3-208ENST00000491292 RRP1P56182 461 aaKnown RBP12.93□□□□□ -0.34
ERCC3-208ENST00000491292 TOP2BQ02880 1626 aa12.92□□□□□ -0.34
ERCC3-208ENST00000491292 GSE1Q14687 1217 aa12.92□□□□□ -0.34
ERCC3-208ENST00000491292 CDCA7LQ96GN5 454 aa12.91□□□□□ -0.34
ERCC3-208ENST00000491292 SPRYD3Q8NCJ5 442 aa12.9□□□□□ -0.34
ERCC3-208ENST00000491292 CRBNQ96SW2 442 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 138.7 ms