RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 CFAP44Q96MT7 982 aa11.04□□□□□ -0.64
SSX2IP-208ENST00000490476 C19orf67A6NJJ6 358 aa11.03□□□□□ -0.64
SSX2IP-208ENST00000490476 CHADLQ6NUI6 762 aa11.03□□□□□ -0.64
SSX2IP-208ENST00000490476 PAXIP1Q6ZW49 1069 aaPredicted RBP11.03□□□□□ -0.64
SSX2IP-208ENST00000490476 EVX2Q03828 476 aa11.01□□□□□ -0.65
SSX2IP-208ENST00000490476 CHGAP10645 457 aaKnown RBP10.98□□□□□ -0.65
SSX2IP-208ENST00000490476 VSIG10Q8N0Z9 540 aa10.95□□□□□ -0.66
SSX2IP-208ENST00000490476 FARP1Q9Y4F1 1045 aaPredicted RBP10.95□□□□□ -0.66
SSX2IP-208ENST00000490476 GSE1Q14687 1217 aa10.94□□□□□ -0.66
SSX2IP-208ENST00000490476 DCAF8Q5TAQ9 597 aa10.94□□□□□ -0.66
SSX2IP-208ENST00000490476 TRIM41Q8WV44 630 aa10.93□□□□□ -0.66
SSX2IP-208ENST00000490476 SPRYD3Q8NCJ5 442 aa10.92□□□□□ -0.66
SSX2IP-208ENST00000490476 NUBP1P53384 320 aa10.91□□□□□ -0.66
SSX2IP-208ENST00000490476 CREBZFQ9NS37 354 aa10.89□□□□□ -0.67
SSX2IP-208ENST00000490476 KDM2AQ9Y2K7 1162 aa10.86□□□□□ -0.67
SSX2IP-208ENST00000490476 RNF25Q96BH1 459 aaPredicted RBP10.85□□□□□ -0.67
SSX2IP-208ENST00000490476 BCANQ96GW7 911 aa10.85□□□□□ -0.67
SSX2IP-208ENST00000490476 CD44P16070 742 aaKnown RBP10.84□□□□□ -0.67
SSX2IP-208ENST00000490476 FAM212AQ96EL1 285 aa10.84□□□□□ -0.67
SSX2IP-208ENST00000490476 TSHZ2Q9NRE2 1034 aa10.84□□□□□ -0.67
SSX2IP-208ENST00000490476 CLCN6P51797 869 aa10.82□□□□□ -0.68
SSX2IP-208ENST00000490476 GABBR2O75899 941 aa10.81□□□□□ -0.68
SSX2IP-208ENST00000490476 HS6ST3Q8IZP7 471 aa10.81□□□□□ -0.68
SSX2IP-208ENST00000490476 RIOK3O14730 519 aaKnown RBP10.8□□□□□ -0.68
SSX2IP-208ENST00000490476 MNX1P50219 401 aaPredicted RBP10.8□□□□□ -0.68
SSX2IP-208ENST00000490476 RASEFQ8IZ41 740 aa10.79□□□□□ -0.68
SSX2IP-208ENST00000490476 TAOK2Q9UL54 1235 aa10.76□□□□□ -0.69
SSX2IP-208ENST00000490476 STK25O00506 426 aa10.73□□□□□ -0.69
SSX2IP-208ENST00000490476 PYGBP11216 843 aa10.72□□□□□ -0.69
SSX2IP-208ENST00000490476 ZNF579Q8NAF0 562 aaKnown RBP10.72□□□□□ -0.69
SSX2IP-208ENST00000490476 NISCHQ9Y2I1 1504 aa10.72□□□□□ -0.69
SSX2IP-208ENST00000490476 VGFO15240 615 aaPredicted RBP10.7□□□□□ -0.7
SSX2IP-208ENST00000490476 PRKCSHP14314 528 aaPredicted RBP10.69□□□□□ -0.7
SSX2IP-208ENST00000490476 NKX1-1Q15270 411 aaPredicted RBP10.69□□□□□ -0.7
SSX2IP-208ENST00000490476 ZRANB1Q9UGI0 708 aa10.69□□□□□ -0.7
SSX2IP-208ENST00000490476 CHRM1P11229 460 aaPredicted RBP10.68□□□□□ -0.7
SSX2IP-208ENST00000490476 PAK3O75914 559 aaPredicted RBP10.67□□□□□ -0.7
SSX2IP-208ENST00000490476 STK24Q9Y6E0 443 aa10.66□□□□□ -0.7
SSX2IP-208ENST00000490476 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.65□□□□□ -0.7
SSX2IP-208ENST00000490476 ZFP91Q96JP5 570 aaPredicted RBP10.65□□□□□ -0.7
SSX2IP-208ENST00000490476 TSPYL2Q9H2G4 693 aaPredicted RBP10.65□□□□□ -0.7
SSX2IP-208ENST00000490476 BCL11BQ9C0K0 894 aaPredicted RBP10.64□□□□□ -0.71
SSX2IP-208ENST00000490476 GTPBP6O43824 516 aaPredicted RBP10.63□□□□□ -0.71
SSX2IP-208ENST00000490476 POTEIP0CG38 1075 aa10.57□□□□□ -0.72
SSX2IP-208ENST00000490476 TPRNQ4KMQ1 711 aa10.57□□□□□ -0.72
SSX2IP-208ENST00000490476 SGIP1Q9BQI5 828 aa10.56□□□□□ -0.72
SSX2IP-208ENST00000490476 DCBLD2Q96PD2 775 aa10.55□□□□□ -0.72
SSX2IP-208ENST00000490476 NBR1Q14596 966 aa10.54□□□□□ -0.72
SSX2IP-208ENST00000490476 GALR2O43603 387 aaPredicted RBP10.52□□□□□ -0.73
SSX2IP-208ENST00000490476 PHF12Q96QT6 1004 aa10.52□□□□□ -0.73
SSX2IP-208ENST00000490476 ZNF467Q7Z7K2 595 aaPredicted RBP10.51□□□□□ -0.73
SSX2IP-208ENST00000490476 RYDENQ9NUL5 291 aaKnown RBP10.51□□□□□ -0.73
SSX2IP-208ENST00000490476 PCDHB8Q9UN66 801 aa10.51□□□□□ -0.73
SSX2IP-208ENST00000490476 PCDHB13Q9Y5F0 798 aa10.51□□□□□ -0.73
SSX2IP-208ENST00000490476 LHX8Q68G74 356 aa10.49□□□□□ -0.73
SSX2IP-208ENST00000490476 PDAP1Q13442 181 aaKnown RBP10.47□□□□□ -0.73
SSX2IP-208ENST00000490476 CCDC61Q9Y6R9 512 aa10.46□□□□□ -0.73
SSX2IP-208ENST00000490476 PSEN1P49768 467 aa10.43□□□□□ -0.74
SSX2IP-208ENST00000490476 MS4A3Q96HJ5 214 aa10.4□□□□□ -0.74
SSX2IP-208ENST00000490476 KIF12Q96FN5 646 aa10.39□□□□□ -0.75
SSX2IP-208ENST00000490476 IFNL1Q8IU54 200 aa10.37□□□□□ -0.75
SSX2IP-208ENST00000490476 MAP3K13O43283 966 aa10.36□□□□□ -0.75
SSX2IP-208ENST00000490476 ASTLQ6HA08 431 aaPredicted RBP10.36□□□□□ -0.75
SSX2IP-208ENST00000490476 CADPS2Q86UW7 1296 aa10.35□□□□□ -0.75
SSX2IP-208ENST00000490476 MFRPQ9BY79 579 aa10.34□□□□□ -0.75
SSX2IP-208ENST00000490476 WDR70Q9NW82 654 aa10.34□□□□□ -0.75
SSX2IP-208ENST00000490476 ATMINO43313 823 aaPredicted RBP10.33□□□□□ -0.76
SSX2IP-208ENST00000490476 CABP2Q9NPB3 220 aa10.33□□□□□ -0.76
SSX2IP-208ENST00000490476 EFCAB3Q8N7B9 438 aa10.31□□□□□ -0.76
SSX2IP-208ENST00000490476 PELP1Q8IZL8 1130 aaKnown RBP10.3□□□□□ -0.76
SSX2IP-208ENST00000490476 C7P10643 843 aa10.28□□□□□ -0.76
SSX2IP-208ENST00000490476 SLC39A7Q92504 469 aa10.28□□□□□ -0.76
SSX2IP-208ENST00000490476 TIE1P35590 1138 aa10.27□□□□□ -0.77
SSX2IP-208ENST00000490476 P3H3Q8IVL6 736 aa10.27□□□□□ -0.77
SSX2IP-208ENST00000490476 PPP1R37O75864 691 aa10.26□□□□□ -0.77
SSX2IP-208ENST00000490476 NLRP6P59044 892 aa10.26□□□□□ -0.77
SSX2IP-208ENST00000490476 PHF8Q9UPP1 1060 aa10.26□□□□□ -0.77
SSX2IP-208ENST00000490476 BMP2KQ9NSY1 1161 aaPredicted RBP10.24□□□□□ -0.77
SSX2IP-208ENST00000490476 METRNQ9UJH8 293 aa10.24□□□□□ -0.77
SSX2IP-208ENST00000490476 SOX12O15370 315 aa10.23□□□□□ -0.77
SSX2IP-208ENST00000490476 ATN1P54259 1190 aaPredicted RBP10.23□□□□□ -0.77
SSX2IP-208ENST00000490476 KCNV2Q8TDN2 545 aa10.23□□□□□ -0.77
SSX2IP-208ENST00000490476 FBXO22Q8NEZ5 403 aa10.22□□□□□ -0.77
SSX2IP-208ENST00000490476 TRPC6Q9Y210 931 aa10.21□□□□□ -0.77
SSX2IP-208ENST00000490476 CECR2Q9BXF3 1484 aa10.21□□□□□ -0.78
SSX2IP-208ENST00000490476 RB1CC1Q8TDY2 1594 aa10.21□□□□□ -0.78
SSX2IP-208ENST00000490476 CCDC180Q9P1Z9 1646 aa10.21□□□□□ -0.78
SSX2IP-208ENST00000490476 POTEB2H3BUK9 544 aa10.2□□□□□ -0.78
SSX2IP-208ENST00000490476 GOLGA2Q08379 1002 aa10.2□□□□□ -0.78
SSX2IP-208ENST00000490476 TTLL13PA6NNM8 815 aa10.18□□□□□ -0.78
SSX2IP-208ENST00000490476 OTUD5Q96G74 571 aa10.17□□□□□ -0.78
SSX2IP-208ENST00000490476 TMEM106CQ9BVX2 250 aa10.17□□□□□ -0.78
SSX2IP-208ENST00000490476 CUX2O14529 1486 aa10.17□□□□□ -0.78
SSX2IP-208ENST00000490476 IER5LQ5T953 404 aa10.13□□□□□ -0.79
SSX2IP-208ENST00000490476 MAMSTRQ6ZN01 415 aa10.13□□□□□ -0.79
SSX2IP-208ENST00000490476 UNC13AQ9UPW8 1703 aa10.13□□□□□ -0.79
SSX2IP-208ENST00000490476 CC2D2AQ9P2K1 1620 aa10.12□□□□□ -0.79
SSX2IP-208ENST00000490476 E2F4Q16254 413 aa10.12□□□□□ -0.79
SSX2IP-208ENST00000490476 MS4A4AQ96JQ5 239 aa10.12□□□□□ -0.79
SSX2IP-208ENST00000490476 MKRN3Q13064 507 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms