RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 AEBP2Q6ZN18 517 aaPredicted RBP21.11■□□□□ 0.97
SSX2IP-208ENST00000490476 CHIC1Q5VXU3 224 aa20.2■□□□□ 0.82
SSX2IP-208ENST00000490476 SENP3Q9H4L4 574 aaPredicted RBP18.07■□□□□ 0.48
SSX2IP-208ENST00000490476 PHF23Q9BUL5 403 aaPredicted RBP17.8■□□□□ 0.44
SSX2IP-208ENST00000490476 FOXD1Q16676 465 aa16.77■□□□□ 0.28
SSX2IP-208ENST00000490476 PLPPR3Q6T4P5 718 aa16.2■□□□□ 0.18
SSX2IP-208ENST00000490476 MSH5O43196 834 aa15.73■□□□□ 0.11
SSX2IP-208ENST00000490476 PPP6R1Q9UPN7 881 aa15.72■□□□□ 0.11
SSX2IP-208ENST00000490476 PIAS4Q8N2W9 510 aaPredicted RBP15.69■□□□□ 0.1
SSX2IP-208ENST00000490476 ADRA2BP18089 450 aa15.67■□□□□ 0.1
SSX2IP-208ENST00000490476 POTEDQ86YR6 584 aa15.12■□□□□ 0.01
SSX2IP-208ENST00000490476 KCNA4P22459 653 aa14.63□□□□□ -0.07
SSX2IP-208ENST00000490476 SCAF1Q9H7N4 1312 aaKnown RBP14.45□□□□□ -0.1
SSX2IP-208ENST00000490476 PPP4R3CPQ6ZMV5 832 aa14.36□□□□□ -0.11
SSX2IP-208ENST00000490476 MAPK8IP2Q13387 824 aaPredicted RBP14.35□□□□□ -0.11
SSX2IP-208ENST00000490476 DMRT2Q9Y5R5 561 aa14.34□□□□□ -0.11
SSX2IP-208ENST00000490476 EHMT2Q96KQ7 1210 aa14.29□□□□□ -0.12
SSX2IP-208ENST00000490476 NCBP3Q53F19 620 aaKnown RBP14.11□□□□□ -0.15
SSX2IP-208ENST00000490476 SLC4A1APQ9BWU0 796 aaKnown RBP14.03□□□□□ -0.16
SSX2IP-208ENST00000490476 CNKSR2Q8WXI2 1034 aa13.93□□□□□ -0.18
SSX2IP-208ENST00000490476 NPM3O75607 178 aaKnown RBP13.92□□□□□ -0.18
SSX2IP-208ENST00000490476 HOXD11P31277 338 aaPredicted RBP13.87□□□□□ -0.19
SSX2IP-208ENST00000490476 CSRNP3Q8WYN3 585 aa13.79□□□□□ -0.2
SSX2IP-208ENST00000490476 RNF216Q9NWF9 866 aaPredicted RBP13.78□□□□□ -0.2
SSX2IP-208ENST00000490476 DCAF8L1A6NGE4 600 aa13.65□□□□□ -0.22
SSX2IP-208ENST00000490476 DNAJC5BQ9UF47 199 aa13.46□□□□□ -0.25
SSX2IP-208ENST00000490476 ZBTB22O15209 634 aa13.45□□□□□ -0.26
SSX2IP-208ENST00000490476 RNF39Q9H2S5 420 aa13.4□□□□□ -0.26
SSX2IP-208ENST00000490476 CACNB1Q02641 598 aaPredicted RBP13.37□□□□□ -0.27
SSX2IP-208ENST00000490476 FOXD4L1Q9NU39 408 aa13.28□□□□□ -0.28
SSX2IP-208ENST00000490476 C1QBPQ07021 282 aaKnown RBP13.25□□□□□ -0.29
SSX2IP-208ENST00000490476 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.16□□□□□ -0.31e-7■□□□□ 10.7
SSX2IP-208ENST00000490476 SLC4A2P04920 1241 aa13.01□□□□□ -0.33
SSX2IP-208ENST00000490476 U3KPZ7 1027 aaPredicted RBP12.89□□□□□ -0.35
SSX2IP-208ENST00000490476 MYCNP04198 464 aaPredicted RBP12.83□□□□□ -0.36
SSX2IP-208ENST00000490476 ATXN8OSP0DMR3 200 aa12.7□□□□□ -0.38
SSX2IP-208ENST00000490476 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.65□□□□□ -0.38
SSX2IP-208ENST00000490476 HNRNPUL2Q1KMD3 747 aaKnown RBP12.65□□□□□ -0.38
SSX2IP-208ENST00000490476 APLP2Q06481 763 aa12.64□□□□□ -0.39
SSX2IP-208ENST00000490476 SPINK5Q9NQ38 1064 aaPredicted RBP12.64□□□□□ -0.39
SSX2IP-208ENST00000490476 CAPN15O75808 1086 aa12.63□□□□□ -0.39
SSX2IP-208ENST00000490476 DSG3P32926 999 aa12.57□□□□□ -0.4
SSX2IP-208ENST00000490476 SAMD1Q6SPF0 538 aaPredicted RBP12.56□□□□□ -0.4
SSX2IP-208ENST00000490476 ZNF219Q9P2Y4 722 aaPredicted RBP12.5□□□□□ -0.41
SSX2IP-208ENST00000490476 ATF5Q9Y2D1 282 aaPredicted RBP12.5□□□□□ -0.41
SSX2IP-208ENST00000490476 FKBP8Q14318 412 aa12.49□□□□□ -0.41
SSX2IP-208ENST00000490476 TRHP20396 242 aaPredicted RBP12.43□□□□□ -0.42
SSX2IP-208ENST00000490476 ABCB7O75027 752 aa12.3□□□□□ -0.44
SSX2IP-208ENST00000490476 RTN4Q9NQC3 1192 aaKnown RBP12.26□□□□□ -0.45
SSX2IP-208ENST00000490476 AMER1Q5JTC6 1135 aaPredicted RBP12.2□□□□□ -0.46
SSX2IP-208ENST00000490476 POLA2Q14181 598 aa12.15□□□□□ -0.46
SSX2IP-208ENST00000490476 RBM42Q9BTD8 480 aaKnown RBP12.05□□□□□ -0.48
SSX2IP-208ENST00000490476 ZBTB12Q9Y330 459 aaPredicted RBP12□□□□□ -0.49
SSX2IP-208ENST00000490476 SPDYE4A6NLX3 237 aa11.96□□□□□ -0.49
SSX2IP-208ENST00000490476 MKRN4PQ13434 485 aaPredicted RBP11.96□□□□□ -0.49
SSX2IP-208ENST00000490476 FBLN2P98095 1184 aa11.93□□□□□ -0.5
SSX2IP-208ENST00000490476 SLC24A1O60721 1099 aa11.89□□□□□ -0.51
SSX2IP-208ENST00000490476 POTEHQ6S545 545 aa11.88□□□□□ -0.51
SSX2IP-208ENST00000490476 FBXO3Q9UK99 471 aa11.83□□□□□ -0.52
SSX2IP-208ENST00000490476 AKT1S1Q96B36 256 aa11.78□□□□□ -0.52
SSX2IP-208ENST00000490476 OSCARQ8IYS5 282 aa11.74□□□□□ -0.53
SSX2IP-208ENST00000490476 PROM2Q8N271 834 aa11.71□□□□□ -0.53
SSX2IP-208ENST00000490476 CHRDL2Q6WN34 429 aa11.69□□□□□ -0.54
SSX2IP-208ENST00000490476 VASPP50552 380 aaPredicted RBP11.68□□□□□ -0.54
SSX2IP-208ENST00000490476 REM2Q8IYK8 340 aaPredicted RBP11.62□□□□□ -0.55
SSX2IP-208ENST00000490476 SPDYE2BA6NHP3 402 aa11.61□□□□□ -0.55
SSX2IP-208ENST00000490476 SPDYE6P0CI01 402 aa11.61□□□□□ -0.55
SSX2IP-208ENST00000490476 SPDYE2Q495Y8 402 aa11.61□□□□□ -0.55
SSX2IP-208ENST00000490476 IFNLR1Q8IU57 520 aaPredicted RBP11.57□□□□□ -0.56
SSX2IP-208ENST00000490476 ZNF692Q9BU19 519 aaPredicted RBP11.55□□□□□ -0.56
SSX2IP-208ENST00000490476 PITPNM1O00562 1244 aa11.48□□□□□ -0.57
SSX2IP-208ENST00000490476 DCAF8L2P0C7V8 631 aa11.48□□□□□ -0.57
SSX2IP-208ENST00000490476 KLHL34Q8N239 644 aa11.45□□□□□ -0.58
SSX2IP-208ENST00000490476 SSUH2Q9Y2M2 353 aa11.45□□□□□ -0.58
SSX2IP-208ENST00000490476 PABPN1Q86U42 306 aaKnown RBP eCLIP11.42□□□□□ -0.58
SSX2IP-208ENST00000490476 PIP4P2Q8N4L2 257 aa11.42□□□□□ -0.58
SSX2IP-208ENST00000490476 FXR2P51116 673 aaKnown RBP eCLIP11.41□□□□□ -0.58
SSX2IP-208ENST00000490476 PKD2Q13563 968 aa11.37□□□□□ -0.59
SSX2IP-208ENST00000490476 PLCD3Q8N3E9 789 aa11.37□□□□□ -0.59
SSX2IP-208ENST00000490476 SPDYE1Q8NFV5 336 aaPredicted RBP11.37□□□□□ -0.59
SSX2IP-208ENST00000490476 DNAJC5Q9H3Z4 198 aa11.37□□□□□ -0.59
SSX2IP-208ENST00000490476 STAG3Q9UJ98 1225 aa11.37□□□□□ -0.59
SSX2IP-208ENST00000490476 SPOCK2Q92563 424 aa11.35□□□□□ -0.59
SSX2IP-208ENST00000490476 MIER1Q8N108 512 aa11.33□□□□□ -0.6
SSX2IP-208ENST00000490476 PLCB2Q00722 1185 aa11.29□□□□□ -0.6
SSX2IP-208ENST00000490476 CLEC11AQ9Y240 323 aa11.28□□□□□ -0.6
SSX2IP-208ENST00000490476 ECM2O94769 699 aaPredicted RBP11.25□□□□□ -0.61
SSX2IP-208ENST00000490476 HAP1P54257 671 aaPredicted RBP11.22□□□□□ -0.61
SSX2IP-208ENST00000490476 PLEKHG5O94827 1062 aa11.2□□□□□ -0.62
SSX2IP-208ENST00000490476 ABCC9O60706 1549 aa11.19□□□□□ -0.62
SSX2IP-208ENST00000490476 PRKAR2AP13861 404 aaKnown RBP11.19□□□□□ -0.62
SSX2IP-208ENST00000490476 SP7Q8TDD2 431 aaPredicted RBP11.19□□□□□ -0.62
SSX2IP-208ENST00000490476 HAX1O00165 279 aa11.17□□□□□ -0.62
SSX2IP-208ENST00000490476 CIZ1Q9ULV3 898 aaPredicted RBP11.16□□□□□ -0.62
SSX2IP-208ENST00000490476 PRR29P0C7W0 189 aa11.15□□□□□ -0.62
SSX2IP-208ENST00000490476 ZBTB47Q9UFB7 747 aaPredicted RBP11.12□□□□□ -0.63
SSX2IP-208ENST00000490476 RGL2O15211 777 aa11.11□□□□□ -0.63
SSX2IP-208ENST00000490476 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.08□□□□□ -0.64
SSX2IP-208ENST00000490476 NPM1P06748 294 aaKnown RBP eCLIP11.07□□□□□ -0.64
SSX2IP-208ENST00000490476 BBXQ8WY36 941 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms