RNA–Protein interactions for RNA: ENST00000489651.5

MED15-229, Transcript of mediator complex subunit 15, humanhuman

TSL 1 (best)

Gene MED15, Length 3,563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED15-229ENST00000489651 BIVM-ERCC5R4GMW8 1640 aa16.52■□□□□ 0.23
MED15-229ENST00000489651 TRIM52Q96A61 297 aa16.51■□□□□ 0.23
MED15-229ENST00000489651 TSHZ2Q9NRE2 1034 aa16.48■□□□□ 0.23
MED15-229ENST00000489651 NCAPD3P42695 1498 aa16.48■□□□□ 0.23
MED15-229ENST00000489651 IGF1RP08069 1367 aa16.48■□□□□ 0.23
MED15-229ENST00000489651 PHLDB1Q86UU1 1377 aa16.45■□□□□ 0.22
MED15-229ENST00000489651 CFTRP13569 1480 aa16.44■□□□□ 0.22
MED15-229ENST00000489651 CC2D2AQ9P2K1 1620 aa16.44■□□□□ 0.22
MED15-229ENST00000489651 TONSLQ96HA7 1378 aa16.43■□□□□ 0.22
MED15-229ENST00000489651 FHAD1B1AJZ9 1412 aa16.42■□□□□ 0.22
MED15-229ENST00000489651 HMGXB3Q12766 1538 aa16.4■□□□□ 0.22
MED15-229ENST00000489651 LRRC9Q6ZRR7 1453 aa16.39■□□□□ 0.21
MED15-229ENST00000489651 FHOD3Q2V2M9 1422 aa16.37■□□□□ 0.21
MED15-229ENST00000489651 TIAM1Q13009 1591 aa16.37■□□□□ 0.21
MED15-229ENST00000489651 PPP1R15AO75807 674 aaPredicted RBP16.36■□□□□ 0.21
MED15-229ENST00000489651 CADPSQ9ULU8 1353 aa16.36■□□□□ 0.21
MED15-229ENST00000489651 MAPKBP1O60336 1514 aa16.35■□□□□ 0.21
MED15-229ENST00000489651 FGD5Q6ZNL6 1462 aa16.35■□□□□ 0.21
MED15-229ENST00000489651 MTUS2Q5JR59 1369 aa16.35■□□□□ 0.21
MED15-229ENST00000489651 WDR97A6NE52 1622 aa16.34■□□□□ 0.21
MED15-229ENST00000489651 TIMELESSQ9UNS1 1208 aa16.34■□□□□ 0.21
MED15-229ENST00000489651 ANP32EQ9BTT0 268 aa16.32■□□□□ 0.2
MED15-229ENST00000489651 HNRNPUQ00839 825 aaKnown RBP eCLIP16.31■□□□□ 0.2
MED15-229ENST00000489651 CHIC2Q9UKJ5 165 aa16.29■□□□□ 0.2
MED15-229ENST00000489651 CCER2I3L3R5 266 aa16.29■□□□□ 0.2
MED15-229ENST00000489651 IRX6P78412 446 aaPredicted RBP16.27■□□□□ 0.2
MED15-229ENST00000489651 ARID3CA6NKF2 412 aa16.26■□□□□ 0.19
MED15-229ENST00000489651 RRP7BPQ9NSQ0 103 aa16.26■□□□□ 0.19
MED15-229ENST00000489651 MAP3K1Q13233 1512 aa16.24■□□□□ 0.19
MED15-229ENST00000489651 RAD54L2Q9Y4B4 1467 aa16.23■□□□□ 0.19
MED15-229ENST00000489651 ERICH6Q7L0X2 663 aa16.23■□□□□ 0.19
MED15-229ENST00000489651 CNGB1Q14028 1251 aaPredicted RBP16.23■□□□□ 0.19
MED15-229ENST00000489651 PCF11O94913 1555 aaKnown RBP16.22■□□□□ 0.19
MED15-229ENST00000489651 RBM19Q9Y4C8 960 aaKnown RBP16.21■□□□□ 0.19
MED15-229ENST00000489651 FANCD2Q9BXW9 1451 aa16.2■□□□□ 0.18
MED15-229ENST00000489651 PRDM2Q13029 1718 aa16.19■□□□□ 0.18
MED15-229ENST00000489651 CCDC18Q5T9S5 1454 aa16.19■□□□□ 0.18
MED15-229ENST00000489651 FGD6Q6ZV73 1430 aa16.18■□□□□ 0.18
MED15-229ENST00000489651 FMN1Q68DA7 1419 aa16.18■□□□□ 0.18
MED15-229ENST00000489651 CDK11AQ9UQ88 783 aaPredicted RBP16.17■□□□□ 0.18
MED15-229ENST00000489651 CASKIN1Q8WXD9 1431 aa16.17■□□□□ 0.18
MED15-229ENST00000489651 POLR3GLQ9BT43 218 aa16.16■□□□□ 0.18
MED15-229ENST00000489651 FYCO1Q9BQS8 1478 aa16.15■□□□□ 0.18
MED15-229ENST00000489651 FAM9BQ8IZU0 186 aa16.15■□□□□ 0.18
MED15-229ENST00000489651 TDRD9Q8NDG6 1382 aaKnown RBP16.15■□□□□ 0.18
MED15-229ENST00000489651 HSPA5P11021 654 aaKnown RBP16.13■□□□□ 0.17
MED15-229ENST00000489651 EIF4G2P78344 907 aaKnown RBP eCLIP16.13■□□□□ 0.17
MED15-229ENST00000489651 UACAQ9BZF9 1416 aa16.11■□□□□ 0.17
MED15-229ENST00000489651 FOXD1Q16676 465 aa16.09■□□□□ 0.17
MED15-229ENST00000489651 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.08■□□□□ 0.171e-6■■□□□ 14.2
MED15-229ENST00000489651 MRS2Q9HD23 443 aa16.08■□□□□ 0.16
MED15-229ENST00000489651 DNAJC5BQ9UF47 199 aa16.08■□□□□ 0.16
MED15-229ENST00000489651 POLA1P09884 1462 aaPredicted RBP16.08■□□□□ 0.16
MED15-229ENST00000489651 EFCAB5A4FU69 1503 aa16.07■□□□□ 0.16
MED15-229ENST00000489651 HFM1A2PYH4 1435 aa16.07■□□□□ 0.16
MED15-229ENST00000489651 CFAP43Q8NDM7 1665 aa16.06■□□□□ 0.16
MED15-229ENST00000489651 ZNF326Q5BKZ1 582 aaKnown RBP16.06■□□□□ 0.16
MED15-229ENST00000489651 PTPRKQ15262 1439 aa16.05■□□□□ 0.16
MED15-229ENST00000489651 MYOM3Q5VTT5 1437 aa16.05■□□□□ 0.16
MED15-229ENST00000489651 NCOA2Q15596 1464 aa16.05■□□□□ 0.16
MED15-229ENST00000489651 TOPBP1Q92547 1522 aa16.04■□□□□ 0.16
MED15-229ENST00000489651 NESP48681 1621 aa16.04■□□□□ 0.16
MED15-229ENST00000489651 NAIPQ13075 1403 aa16.03■□□□□ 0.16
MED15-229ENST00000489651 WASHC2AQ641Q2 1341 aa16.03■□□□□ 0.16
MED15-229ENST00000489651 ABCA10Q8WWZ4 1543 aa16.03■□□□□ 0.16
MED15-229ENST00000489651 AQRO60306 1485 aaKnown RBP eCLIP16.02■□□□□ 0.164e-8■■■■■ 30.3
MED15-229ENST00000489651 L3MBTL2Q969R5 705 aa16.02■□□□□ 0.16
MED15-229ENST00000489651 MPHOSPH9Q99550 1183 aa16.01■□□□□ 0.15
MED15-229ENST00000489651 DNMBPQ6XZF7 1577 aa16■□□□□ 0.15
MED15-229ENST00000489651 SLC4A1APQ9BWU0 796 aaKnown RBP15.98■□□□□ 0.15
MED15-229ENST00000489651 B4GALNT3Q6L9W6 998 aa15.97■□□□□ 0.15
MED15-229ENST00000489651 PTPN23Q9H3S7 1636 aa15.97■□□□□ 0.15
MED15-229ENST00000489651 SENP3-EIF4A1A0A087X0R7 540 aa15.97■□□□□ 0.15
MED15-229ENST00000489651 CCDC184Q52MB2 194 aa15.97■□□□□ 0.15
MED15-229ENST00000489651 PPP4R2Q9NY27 417 aa15.96■□□□□ 0.15
MED15-229ENST00000489651 GAPVD1Q14C86 1478 aa15.95■□□□□ 0.14
MED15-229ENST00000489651 ZNF777Q9ULD5 760 aaPredicted RBP15.94■□□□□ 0.14
MED15-229ENST00000489651 SNAPC4Q5SXM2 1469 aa15.94■□□□□ 0.14
MED15-229ENST00000489651 BCL11AQ9H165 835 aa15.93■□□□□ 0.14
MED15-229ENST00000489651 PRKRIP1Q9H875 184 aaPredicted RBP15.93■□□□□ 0.14
MED15-229ENST00000489651 CUL7Q14999 1698 aa15.92■□□□□ 0.14
MED15-229ENST00000489651 EHBP1L1Q8N3D4 1523 aa15.89■□□□□ 0.13
MED15-229ENST00000489651 C11orf95C9JLR9 678 aaPredicted RBP15.89■□□□□ 0.13
MED15-229ENST00000489651 CNTLNQ9NXG0 1405 aa15.89■□□□□ 0.13
MED15-229ENST00000489651 MSH5O43196 834 aa15.88■□□□□ 0.13
MED15-229ENST00000489651 SUPT6HQ7KZ85 1726 aaKnown RBP15.88■□□□□ 0.13
MED15-229ENST00000489651 CCDC7Q96M83 1385 aa15.88■□□□□ 0.13
MED15-229ENST00000489651 CTTNBP2Q8WZ74 1663 aa15.87■□□□□ 0.13
MED15-229ENST00000489651 LAMC3Q9Y6N6 1575 aa15.86■□□□□ 0.13
MED15-229ENST00000489651 GRIN2BQ13224 1484 aa15.86■□□□□ 0.13
MED15-229ENST00000489651 NBPF8Q3BBV2 869 aa15.86■□□□□ 0.13
MED15-229ENST00000489651 ERICH6BQ5W0A0 696 aa15.85■□□□□ 0.13
MED15-229ENST00000489651 PDS5BQ9NTI5 1447 aa15.85■□□□□ 0.13
MED15-229ENST00000489651 URB2Q14146 1524 aaKnown RBP15.85■□□□□ 0.13
MED15-229ENST00000489651 ZNF644Q9H582 1327 aaPredicted RBP15.84■□□□□ 0.13
MED15-229ENST00000489651 FANCIQ9NVI1 1328 aa15.84■□□□□ 0.13
MED15-229ENST00000489651 KIF7Q2M1P5 1343 aa15.83■□□□□ 0.13
MED15-229ENST00000489651 CCDC136Q96JN2 1154 aa15.83■□□□□ 0.12
MED15-229ENST00000489651 ZBED9Q6R2W3 1325 aa15.83■□□□□ 0.12
MED15-229ENST00000489651 TMC1Q8TDI8 760 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms