RNA–Protein interactions for RNA: ENST00000488601.6

POLR1C-208, Transcript of RNA polymerase I and III subunit C, humanhuman

TSL 2

Gene POLR1C, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1C-208ENST00000488601 TSPOAP1O95153 1857 aa13.39□□□□□ -0.27
POLR1C-208ENST00000488601 CFTRP13569 1480 aa13.37□□□□□ -0.27
POLR1C-208ENST00000488601 IFFO2Q5TF58 517 aa13.37□□□□□ -0.27
POLR1C-208ENST00000488601 MAPKBP1O60336 1514 aa13.37□□□□□ -0.27
POLR1C-208ENST00000488601 SNAPC4Q5SXM2 1469 aa13.36□□□□□ -0.27
POLR1C-208ENST00000488601 MAPK8IP2Q13387 824 aaPredicted RBP13.36□□□□□ -0.27
POLR1C-208ENST00000488601 COL17A1Q9UMD9 1497 aaPredicted RBP13.29□□□□□ -0.28
POLR1C-208ENST00000488601 NPM1P06748 294 aaKnown RBP eCLIP13.29□□□□□ -0.28
POLR1C-208ENST00000488601 PTPRMP28827 1452 aa13.28□□□□□ -0.28
POLR1C-208ENST00000488601 TARBP1Q13395 1621 aaKnown RBP13.28□□□□□ -0.28
POLR1C-208ENST00000488601 MED1Q15648 1581 aaPredicted RBP13.27□□□□□ -0.29
POLR1C-208ENST00000488601 SRCAPQ6ZRS2 3230 aa13.25□□□□□ -0.29
POLR1C-208ENST00000488601 TOPBP1Q92547 1522 aa13.25□□□□□ -0.29
POLR1C-208ENST00000488601 ZBTB22O15209 634 aa13.25□□□□□ -0.29
POLR1C-208ENST00000488601 HSPA2P54652 639 aa13.25□□□□□ -0.29
POLR1C-208ENST00000488601 MROH2BQ7Z745 1585 aa13.21□□□□□ -0.29
POLR1C-208ENST00000488601 MAGI1Q96QZ7 1491 aaPredicted RBP13.21□□□□□ -0.3
POLR1C-208ENST00000488601 CEP170Q5SW79 1584 aa13.16□□□□□ -0.3
POLR1C-208ENST00000488601 RNF216Q9NWF9 866 aaPredicted RBP13.15□□□□□ -0.3
POLR1C-208ENST00000488601 TDRD9Q8NDG6 1382 aaKnown RBP13.15□□□□□ -0.3
POLR1C-208ENST00000488601 PPRC1Q5VV67 1664 aaKnown RBP13.14□□□□□ -0.31
POLR1C-208ENST00000488601 ABCC8Q09428 1581 aa13.13□□□□□ -0.31
POLR1C-208ENST00000488601 IQSEC2Q5JU85 1478 aa13.12□□□□□ -0.31
POLR1C-208ENST00000488601 ADAMTSL3P82987 1691 aa13.06□□□□□ -0.32
POLR1C-208ENST00000488601 DMRT2Q9Y5R5 561 aa13.06□□□□□ -0.32
POLR1C-208ENST00000488601 FOXD4L1Q9NU39 408 aa13.04□□□□□ -0.32
POLR1C-208ENST00000488601 GRIN2BQ13224 1484 aa13.03□□□□□ -0.32
POLR1C-208ENST00000488601 SHROOM2Q13796 1616 aa13.02□□□□□ -0.33
POLR1C-208ENST00000488601 DNMBPQ6XZF7 1577 aa13.01□□□□□ -0.33
POLR1C-208ENST00000488601 WDR97A6NE52 1622 aa13.01□□□□□ -0.33
POLR1C-208ENST00000488601 POLA1P09884 1462 aaPredicted RBP13□□□□□ -0.33
POLR1C-208ENST00000488601 GLI2P10070 1586 aa12.99□□□□□ -0.33
POLR1C-208ENST00000488601 ADCY10Q96PN6 1610 aa12.99□□□□□ -0.33
POLR1C-208ENST00000488601 RAD54L2Q9Y4B4 1467 aa12.98□□□□□ -0.33
POLR1C-208ENST00000488601 KIF21BO75037 1637 aa12.98□□□□□ -0.33
POLR1C-208ENST00000488601 LTBP4Q8N2S1 1624 aa12.97□□□□□ -0.33
POLR1C-208ENST00000488601 YEATS2Q9ULM3 1422 aa12.96□□□□□ -0.33
POLR1C-208ENST00000488601 UBAP1LF5GYI3 381 aa12.96□□□□□ -0.33
POLR1C-208ENST00000488601 HOXD11P31277 338 aaPredicted RBP12.96□□□□□ -0.33
POLR1C-208ENST00000488601 PTPRTO14522 1441 aa12.96□□□□□ -0.34
POLR1C-208ENST00000488601 HSPA1LP34931 641 aa12.95□□□□□ -0.34
POLR1C-208ENST00000488601 TEX14Q8IWB6 1497 aa12.94□□□□□ -0.34
POLR1C-208ENST00000488601 RGS17Q9UGC6 210 aaPredicted RBP12.94□□□□□ -0.34
POLR1C-208ENST00000488601 SOGA1O94964 1423 aa12.93□□□□□ -0.34
POLR1C-208ENST00000488601 PRG4Q92954 1404 aaPredicted RBP12.92□□□□□ -0.34
POLR1C-208ENST00000488601 NUP160Q12769 1436 aa12.91□□□□□ -0.34
POLR1C-208ENST00000488601 PRDM2Q13029 1718 aa12.9□□□□□ -0.34
POLR1C-208ENST00000488601 MADDQ8WXG6 1647 aa12.86□□□□□ -0.35
POLR1C-208ENST00000488601 GRIN2AQ12879 1464 aa12.85□□□□□ -0.35
POLR1C-208ENST00000488601 STRCQ7RTU9 1775 aa12.84□□□□□ -0.35
POLR1C-208ENST00000488601 PLB1Q6P1J6 1458 aa12.82□□□□□ -0.36
POLR1C-208ENST00000488601 MAP3K4Q9Y6R4 1608 aa12.81□□□□□ -0.36
POLR1C-208ENST00000488601 UPF1Q92900 1129 aaKnown RBP eCLIP12.81□□□□□ -0.36
POLR1C-208ENST00000488601 ASXL2Q76L83 1435 aa12.8□□□□□ -0.36
POLR1C-208ENST00000488601 BCORL1Q5H9F3 1711 aa12.8□□□□□ -0.36
POLR1C-208ENST00000488601 KIAA0586Q9BVV6 1533 aa12.8□□□□□ -0.36
POLR1C-208ENST00000488601 JPH4Q96JJ6 628 aa12.8□□□□□ -0.36
POLR1C-208ENST00000488601 SLC4A2P04920 1241 aa12.79□□□□□ -0.36
POLR1C-208ENST00000488601 POTEAQ6S8J7 498 aa12.77□□□□□ -0.37
POLR1C-208ENST00000488601 RIMS1Q86UR5 1692 aaKnown RBP12.73□□□□□ -0.37
POLR1C-208ENST00000488601 PBRM1Q86U86 1689 aa12.72□□□□□ -0.37
POLR1C-208ENST00000488601 CFAP43Q8NDM7 1665 aa12.72□□□□□ -0.37
POLR1C-208ENST00000488601 EPRSP07814 1512 aaKnown RBP12.72□□□□□ -0.37
POLR1C-208ENST00000488601 WIZO95785 1651 aa12.7□□□□□ -0.38
POLR1C-208ENST00000488601 PIP4K2BP78356 416 aa12.68□□□□□ -0.38
POLR1C-208ENST00000488601 ARID4BQ4LE39 1312 aaPredicted RBP12.67□□□□□ -0.38
POLR1C-208ENST00000488601 SETD1AO15047 1707 aaKnown RBP12.67□□□□□ -0.38
POLR1C-208ENST00000488601 ABCC2Q92887 1545 aa12.66□□□□□ -0.38
POLR1C-208ENST00000488601 FGD5Q6ZNL6 1462 aa12.63□□□□□ -0.39
POLR1C-208ENST00000488601 TOM1O60784 492 aa12.62□□□□□ -0.39
POLR1C-208ENST00000488601 SLC34A2O95436 690 aa12.62□□□□□ -0.39
POLR1C-208ENST00000488601 PREX1Q8TCU6 1659 aa12.61□□□□□ -0.39
POLR1C-208ENST00000488601 RBM33Q96EV2 1170 aaKnown RBP12.61□□□□□ -0.39
POLR1C-208ENST00000488601 MYCNP04198 464 aaPredicted RBP12.6□□□□□ -0.39
POLR1C-208ENST00000488601 MAGI3Q5TCQ9 1506 aa12.59□□□□□ -0.39
POLR1C-208ENST00000488601 PCDH10Q9P2E7 1040 aa12.57□□□□□ -0.4
POLR1C-208ENST00000488601 ZNF335Q9H4Z2 1342 aaPredicted RBP12.57□□□□□ -0.4
POLR1C-208ENST00000488601 ARAP3Q8WWN8 1544 aa12.56□□□□□ -0.4
POLR1C-208ENST00000488601 ADAMTS12P58397 1594 aa12.54□□□□□ -0.4
POLR1C-208ENST00000488601 ATXN8OSP0DMR3 200 aa12.52□□□□□ -0.41
POLR1C-208ENST00000488601 UHRF1BP1Q6BDS2 1440 aa12.51□□□□□ -0.41
POLR1C-208ENST00000488601 CD109Q6YHK3 1445 aa12.51□□□□□ -0.41
POLR1C-208ENST00000488601 ABCA5Q8WWZ7 1642 aa12.5□□□□□ -0.41
POLR1C-208ENST00000488601 CUL7Q14999 1698 aa12.49□□□□□ -0.41
POLR1C-208ENST00000488601 FHAD1B1AJZ9 1412 aa12.49□□□□□ -0.41
POLR1C-208ENST00000488601 PTPRGP23470 1445 aa12.48□□□□□ -0.41
POLR1C-208ENST00000488601 TTC37Q6PGP7 1564 aa12.47□□□□□ -0.41
POLR1C-208ENST00000488601 DCAF8L1A6NGE4 600 aa12.46□□□□□ -0.41
POLR1C-208ENST00000488601 ZRANB1Q9UGI0 708 aa12.46□□□□□ -0.41
POLR1C-208ENST00000488601 POGZQ7Z3K3 1410 aa12.45□□□□□ -0.42
POLR1C-208ENST00000488601 UHRF1BP1LA0JNW5 1464 aa12.44□□□□□ -0.42
POLR1C-208ENST00000488601 NCOA1Q15788 1441 aa12.44□□□□□ -0.42
POLR1C-208ENST00000488601 SETBP1Q9Y6X0 1596 aa12.43□□□□□ -0.42
POLR1C-208ENST00000488601 TOP2AP11388 1531 aaKnown RBP12.43□□□□□ -0.42
POLR1C-208ENST00000488601 SENP3-EIF4A1A0A087X0R7 540 aa12.43□□□□□ -0.42
POLR1C-208ENST00000488601 RAPGEF3O95398 923 aa12.41□□□□□ -0.42
POLR1C-208ENST00000488601 YY1P25490 414 aa12.41□□□□□ -0.42
POLR1C-208ENST00000488601 RUSC2Q8N2Y8 1516 aa12.41□□□□□ -0.42
POLR1C-208ENST00000488601 ABCA10Q8WWZ4 1543 aa12.41□□□□□ -0.42
POLR1C-208ENST00000488601 CEBPAP49715 358 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms