RNA–Protein interactions for RNA: ENST00000487841.5

SFT2D1-204, Transcript of SFT2 domain containing 1, humanhuman

TSL 1 (best)

Gene SFT2D1, Length 2,576 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D1-204ENST00000487841 FAM50AQ14320 339 aaKnown RBP18.91■□□□□ 0.62
SFT2D1-204ENST00000487841 TIAM1Q13009 1591 aa18.9■□□□□ 0.62
SFT2D1-204ENST00000487841 PDS5BQ9NTI5 1447 aa18.9■□□□□ 0.62
SFT2D1-204ENST00000487841 PHLDB1Q86UU1 1377 aa18.89■□□□□ 0.62
SFT2D1-204ENST00000487841 LRRC9Q6ZRR7 1453 aa18.88■□□□□ 0.61
SFT2D1-204ENST00000487841 NEUROD1Q13562 356 aa18.88■□□□□ 0.61
SFT2D1-204ENST00000487841 PCF11O94913 1555 aaKnown RBP18.86■□□□□ 0.61
SFT2D1-204ENST00000487841 FHAD1B1AJZ9 1412 aa18.86■□□□□ 0.61
SFT2D1-204ENST00000487841 GAPVD1Q14C86 1478 aa18.84■□□□□ 0.61
SFT2D1-204ENST00000487841 KIF21AQ7Z4S6 1674 aa18.83■□□□□ 0.61
SFT2D1-204ENST00000487841 YTHDC1Q96MU7 727 aaKnown RBP18.83■□□□□ 0.6
SFT2D1-204ENST00000487841 MIER1Q8N108 512 aa18.83■□□□□ 0.6
SFT2D1-204ENST00000487841 RAB3GAP2Q9H2M9 1393 aa18.81■□□□□ 0.6
SFT2D1-204ENST00000487841 CUL7Q14999 1698 aa18.79■□□□□ 0.6
SFT2D1-204ENST00000487841 ACIN1Q9UKV3 1341 aaKnown RBP18.79■□□□□ 0.6
SFT2D1-204ENST00000487841 MAP3K1Q13233 1512 aa18.77■□□□□ 0.59
SFT2D1-204ENST00000487841 WDR97A6NE52 1622 aa18.76■□□□□ 0.59
SFT2D1-204ENST00000487841 AQRO60306 1485 aaKnown RBP eCLIP18.76■□□□□ 0.591e-13■■■■■ 33.4
SFT2D1-204ENST00000487841 CLSPNQ9HAW4 1339 aa18.75■□□□□ 0.59
SFT2D1-204ENST00000487841 ABCA5Q8WWZ7 1642 aa18.75■□□□□ 0.59
SFT2D1-204ENST00000487841 CTTNBP2Q8WZ74 1663 aa18.74■□□□□ 0.59
SFT2D1-204ENST00000487841 CASKIN1Q8WXD9 1431 aa18.73■□□□□ 0.59
SFT2D1-204ENST00000487841 ARID3CA6NKF2 412 aa18.73■□□□□ 0.59
SFT2D1-204ENST00000487841 FYCO1Q9BQS8 1478 aa18.71■□□□□ 0.59
SFT2D1-204ENST00000487841 EFCAB5A4FU69 1503 aa18.71■□□□□ 0.59
SFT2D1-204ENST00000487841 FMN1Q68DA7 1419 aa18.7■□□□□ 0.58
SFT2D1-204ENST00000487841 SIN3AQ96ST3 1273 aa18.69■□□□□ 0.58
SFT2D1-204ENST00000487841 CFAP43Q8NDM7 1665 aa18.69■□□□□ 0.58
SFT2D1-204ENST00000487841 SETD5Q9C0A6 1442 aa18.69■□□□□ 0.58
SFT2D1-204ENST00000487841 MTUS2Q5JR59 1369 aa18.68■□□□□ 0.58
SFT2D1-204ENST00000487841 TARBP1Q13395 1621 aaKnown RBP18.68■□□□□ 0.58
SFT2D1-204ENST00000487841 CENPBP07199 599 aaPredicted RBP18.67■□□□□ 0.58
SFT2D1-204ENST00000487841 SNAPC4Q5SXM2 1469 aa18.67■□□□□ 0.58
SFT2D1-204ENST00000487841 GTF3C3Q9Y5Q9 886 aa18.65■□□□□ 0.58
SFT2D1-204ENST00000487841 MAPKBP1O60336 1514 aa18.63■□□□□ 0.57
SFT2D1-204ENST00000487841 ZNF608Q9ULD9 1512 aaPredicted RBP18.62■□□□□ 0.57
SFT2D1-204ENST00000487841 SAMD9Q5K651 1589 aa18.59■□□□□ 0.57
SFT2D1-204ENST00000487841 MRC2Q9UBG0 1479 aa18.59■□□□□ 0.57
SFT2D1-204ENST00000487841 FGD6Q6ZV73 1430 aa18.58■□□□□ 0.56
SFT2D1-204ENST00000487841 LRRIQ1Q96JM4 1722 aa18.57■□□□□ 0.56
SFT2D1-204ENST00000487841 PTPRKQ15262 1439 aa18.55■□□□□ 0.56
SFT2D1-204ENST00000487841 GRIN2BQ13224 1484 aa18.55■□□□□ 0.56
SFT2D1-204ENST00000487841 PELP1Q8IZL8 1130 aaKnown RBP18.54■□□□□ 0.56
SFT2D1-204ENST00000487841 NCOA2Q15596 1464 aa18.54■□□□□ 0.56
SFT2D1-204ENST00000487841 CHIC2Q9UKJ5 165 aa18.53■□□□□ 0.56
SFT2D1-204ENST00000487841 PBRM1Q86U86 1689 aa18.53■□□□□ 0.56
SFT2D1-204ENST00000487841 HIRIP3Q9BW71 556 aaPredicted RBP18.52■□□□□ 0.56
SFT2D1-204ENST00000487841 MAGI3Q5TCQ9 1506 aa18.5■□□□□ 0.55
SFT2D1-204ENST00000487841 FBLN2P98095 1184 aa18.5■□□□□ 0.55
SFT2D1-204ENST00000487841 RRP7BPQ9NSQ0 103 aa18.48■□□□□ 0.55
SFT2D1-204ENST00000487841 ADAMTS12P58397 1594 aa18.48■□□□□ 0.55
SFT2D1-204ENST00000487841 IQGAP2Q13576 1575 aa18.48■□□□□ 0.55
SFT2D1-204ENST00000487841 MYOM3Q5VTT5 1437 aa18.47■□□□□ 0.55
SFT2D1-204ENST00000487841 ERCC6Q03468 1493 aa18.46■□□□□ 0.55
SFT2D1-204ENST00000487841 CDK13Q14004 1512 aaKnown RBP18.46■□□□□ 0.55
SFT2D1-204ENST00000487841 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.45■□□□□ 0.542e-13■■■□□ 15.3
SFT2D1-204ENST00000487841 IFT140Q96RY7 1462 aa18.43■□□□□ 0.54
SFT2D1-204ENST00000487841 CCDC18Q5T9S5 1454 aa18.42■□□□□ 0.54
SFT2D1-204ENST00000487841 EPRSP07814 1512 aaKnown RBP18.41■□□□□ 0.54
SFT2D1-204ENST00000487841 SUPT6HQ7KZ85 1726 aaKnown RBP18.4■□□□□ 0.54
SFT2D1-204ENST00000487841 WDR62O43379 1518 aa18.4■□□□□ 0.54
SFT2D1-204ENST00000487841 CHMP7Q8WUX9 453 aaPredicted RBP18.4■□□□□ 0.54
SFT2D1-204ENST00000487841 EHBP1L1Q8N3D4 1523 aa18.4■□□□□ 0.54
SFT2D1-204ENST00000487841 HFM1A2PYH4 1435 aa18.39■□□□□ 0.53
SFT2D1-204ENST00000487841 NAIPQ13075 1403 aa18.39■□□□□ 0.53
SFT2D1-204ENST00000487841 KCNH8Q96L42 1107 aa18.39■□□□□ 0.53
SFT2D1-204ENST00000487841 DDX10Q13206 875 aaKnown RBP18.38■□□□□ 0.53
SFT2D1-204ENST00000487841 UGGT2Q9NYU1 1516 aa18.38■□□□□ 0.53
SFT2D1-204ENST00000487841 PPP1R15AO75807 674 aaPredicted RBP18.37■□□□□ 0.53
SFT2D1-204ENST00000487841 THOC2Q8NI27 1593 aaKnown RBP18.36■□□□□ 0.53
SFT2D1-204ENST00000487841 PTPN23Q9H3S7 1636 aa18.36■□□□□ 0.53
SFT2D1-204ENST00000487841 TRIM52Q96A61 297 aa18.36■□□□□ 0.53
SFT2D1-204ENST00000487841 EIF4G3O43432 1585 aaKnown RBP18.35■□□□□ 0.53
SFT2D1-204ENST00000487841 HECW1Q76N89 1606 aa18.35■□□□□ 0.53
SFT2D1-204ENST00000487841 ZNF644Q9H582 1327 aaPredicted RBP18.35■□□□□ 0.53
SFT2D1-204ENST00000487841 DISP1Q96F81 1524 aa18.34■□□□□ 0.53
SFT2D1-204ENST00000487841 GRIN2AQ12879 1464 aa18.34■□□□□ 0.53
SFT2D1-204ENST00000487841 KIAA0586Q9BVV6 1533 aa18.33■□□□□ 0.53
SFT2D1-204ENST00000487841 UACAQ9BZF9 1416 aa18.33■□□□□ 0.52
SFT2D1-204ENST00000487841 ARHGEF11O15085 1522 aa18.32■□□□□ 0.52
SFT2D1-204ENST00000487841 TONSLQ96HA7 1378 aa18.32■□□□□ 0.52
SFT2D1-204ENST00000487841 FOXD1Q16676 465 aa18.32■□□□□ 0.52
SFT2D1-204ENST00000487841 KIAA0556O60303 1618 aa18.28■□□□□ 0.52
SFT2D1-204ENST00000487841 NUP153P49790 1475 aaKnown RBP18.27■□□□□ 0.52
SFT2D1-204ENST00000487841 TIMELESSQ9UNS1 1208 aa18.27■□□□□ 0.52
SFT2D1-204ENST00000487841 KDM6BO15054 1643 aa18.25■□□□□ 0.51
SFT2D1-204ENST00000487841 JPH4Q96JJ6 628 aa18.25■□□□□ 0.51
SFT2D1-204ENST00000487841 PLB1Q6P1J6 1458 aa18.25■□□□□ 0.51
SFT2D1-204ENST00000487841 ZNF777Q9ULD5 760 aaPredicted RBP18.25■□□□□ 0.51
SFT2D1-204ENST00000487841 PRG4Q92954 1404 aaPredicted RBP18.23■□□□□ 0.51
SFT2D1-204ENST00000487841 TCOF1Q13428 1488 aaKnown RBP18.23■□□□□ 0.51
SFT2D1-204ENST00000487841 CEP170Q5SW79 1584 aa18.22■□□□□ 0.51
SFT2D1-204ENST00000487841 MPHOSPH9Q99550 1183 aa18.21■□□□□ 0.51
SFT2D1-204ENST00000487841 CDK11AQ9UQ88 783 aaPredicted RBP18.21■□□□□ 0.51
SFT2D1-204ENST00000487841 SYNJ2O15056 1496 aa18.2■□□□□ 0.5
SFT2D1-204ENST00000487841 DENND4BO75064 1496 aaPredicted RBP18.2■□□□□ 0.5
SFT2D1-204ENST00000487841 MIA2Q96PC5 1412 aa18.2■□□□□ 0.5
SFT2D1-204ENST00000487841 MAGI1Q96QZ7 1491 aaPredicted RBP18.19■□□□□ 0.5
SFT2D1-204ENST00000487841 RAPGEF6Q8TEU7 1601 aa18.18■□□□□ 0.5
SFT2D1-204ENST00000487841 CFDP1Q9UEE9 299 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms