RNA–Protein interactions for RNA: ENST00000487841.5

SFT2D1-204, Transcript of SFT2 domain containing 1, humanhuman

TSL 1 (best)

Gene SFT2D1, Length 2,576 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D1-204ENST00000487841 NISCHQ9Y2I1 1504 aa27.02■■□□□ 1.92
SFT2D1-204ENST00000487841 SHROOM4Q9ULL8 1493 aa23.17■■□□□ 1.3
SFT2D1-204ENST00000487841 CCDC180Q9P1Z9 1646 aa22.91■■□□□ 1.26
SFT2D1-204ENST00000487841 DCAF8L2P0C7V8 631 aa22.83■■□□□ 1.25
SFT2D1-204ENST00000487841 ZCCHC6Q5VYS8 1495 aaKnown RBP22.78■■□□□ 1.24
SFT2D1-204ENST00000487841 SUPT5HO00267 1087 aaKnown RBP22.62■■□□□ 1.21
SFT2D1-204ENST00000487841 DCAF1Q9Y4B6 1507 aa22.02■■□□□ 1.12
SFT2D1-204ENST00000487841 CHIC1Q5VXU3 224 aa21.75■■□□□ 1.07
SFT2D1-204ENST00000487841 ABCC9O60706 1549 aa21.73■■□□□ 1.07
SFT2D1-204ENST00000487841 SCRIBQ14160 1630 aa21.67■■□□□ 1.06
SFT2D1-204ENST00000487841 MYO15BQ96JP2 1530 aa21.61■■□□□ 1.05
SFT2D1-204ENST00000487841 RSF1Q96T23 1441 aaPredicted RBP21.36■■□□□ 1.01
SFT2D1-204ENST00000487841 NACADO15069 1562 aa21.3■■□□□ 1
SFT2D1-204ENST00000487841 LOC105371045A0A1W2PR82 267 aa21.24■□□□□ 0.99
SFT2D1-204ENST00000487841 CECR2Q9BXF3 1484 aa21.22■□□□□ 0.99
SFT2D1-204ENST00000487841 RB1CC1Q8TDY2 1594 aa21.1■□□□□ 0.97
SFT2D1-204ENST00000487841 MROH2BQ7Z745 1585 aa21.07■□□□□ 0.96
SFT2D1-204ENST00000487841 TRIM41Q8WV44 630 aa20.99■□□□□ 0.95
SFT2D1-204ENST00000487841 FAM9AQ8IZU1 332 aaPredicted RBP20.95■□□□□ 0.95
SFT2D1-204ENST00000487841 PCGF6Q9BYE7 350 aa20.95■□□□□ 0.95
SFT2D1-204ENST00000487841 WIZO95785 1651 aa20.94■□□□□ 0.94
SFT2D1-204ENST00000487841 EHMT2Q96KQ7 1210 aa20.91■□□□□ 0.94
SFT2D1-204ENST00000487841 PABPN1Q86U42 306 aaKnown RBP eCLIP20.85■□□□□ 0.93
SFT2D1-204ENST00000487841 UNC13AQ9UPW8 1703 aa20.74■□□□□ 0.91
SFT2D1-204ENST00000487841 BAZ1AQ9NRL2 1556 aaPredicted RBP20.74■□□□□ 0.91
SFT2D1-204ENST00000487841 HRCP23327 699 aa20.65■□□□□ 0.9
SFT2D1-204ENST00000487841 SMARCA4P51532 1647 aa20.6■□□□□ 0.89
SFT2D1-204ENST00000487841 BICRAQ9NZM4 1560 aa20.53■□□□□ 0.88
SFT2D1-204ENST00000487841 CCDC88BA6NC98 1476 aa20.52■□□□□ 0.88
SFT2D1-204ENST00000487841 TOP2AP11388 1531 aaKnown RBP20.5■□□□□ 0.87
SFT2D1-204ENST00000487841 TRIM26Q12899 539 aaPredicted RBP20.46■□□□□ 0.87
SFT2D1-204ENST00000487841 PPARGC1BQ86YN6 1023 aaKnown RBP20.46■□□□□ 0.87
SFT2D1-204ENST00000487841 ABCC8Q09428 1581 aa20.45■□□□□ 0.86
SFT2D1-204ENST00000487841 SMARCA2P51531 1590 aa20.42■□□□□ 0.86
SFT2D1-204ENST00000487841 EIF4G1Q04637 1599 aaKnown RBP20.42■□□□□ 0.86
SFT2D1-204ENST00000487841 SOGA1O94964 1423 aa20.24■□□□□ 0.83
SFT2D1-204ENST00000487841 ATAD2BQ9ULI0 1458 aa20.18■□□□□ 0.82
SFT2D1-204ENST00000487841 RUSC2Q8N2Y8 1516 aa20.17■□□□□ 0.82
SFT2D1-204ENST00000487841 PEG3Q9GZU2 1588 aa20.13■□□□□ 0.81
SFT2D1-204ENST00000487841 TTBK1Q5TCY1 1321 aaPredicted RBP20.13■□□□□ 0.81
SFT2D1-204ENST00000487841 BAZ1BQ9UIG0 1483 aaKnown RBP20.12■□□□□ 0.81
SFT2D1-204ENST00000487841 WRNQ14191 1432 aaPredicted RBP eCLIP20.07■□□□□ 0.8
SFT2D1-204ENST00000487841 CSRNP3Q8WYN3 585 aa20.07■□□□□ 0.8
SFT2D1-204ENST00000487841 UBTFP17480 764 aaKnown RBP20.07■□□□□ 0.8
SFT2D1-204ENST00000487841 CEP162Q5TB80 1403 aa19.97■□□□□ 0.79
SFT2D1-204ENST00000487841 SYNJ1O43426 1573 aa19.97■□□□□ 0.79
SFT2D1-204ENST00000487841 RANGAP1P46060 587 aaPredicted RBP19.9■□□□□ 0.78
SFT2D1-204ENST00000487841 TNIKQ9UKE5 1360 aa19.89■□□□□ 0.78
SFT2D1-204ENST00000487841 EEA1Q15075 1411 aa19.87■□□□□ 0.77
SFT2D1-204ENST00000487841 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.85■□□□□ 0.77
SFT2D1-204ENST00000487841 GOLGA3Q08378 1498 aa19.81■□□□□ 0.76
SFT2D1-204ENST00000487841 ZEB1P37275 1124 aaPredicted RBP19.79■□□□□ 0.76
SFT2D1-204ENST00000487841 NCAPD3P42695 1498 aa19.78■□□□□ 0.76
SFT2D1-204ENST00000487841 CEP164Q9UPV0 1460 aa19.71■□□□□ 0.75
SFT2D1-204ENST00000487841 RAPGEF2Q9Y4G8 1499 aa19.71■□□□□ 0.75
SFT2D1-204ENST00000487841 CCER1Q8TC90 406 aaPredicted RBP19.71■□□□□ 0.75
SFT2D1-204ENST00000487841 HMGXB3Q12766 1538 aa19.69■□□□□ 0.74
SFT2D1-204ENST00000487841 TOP2BQ02880 1626 aa19.67■□□□□ 0.74
SFT2D1-204ENST00000487841 CLIP1P30622 1438 aa19.64■□□□□ 0.74
SFT2D1-204ENST00000487841 KIF21BO75037 1637 aa19.62■□□□□ 0.73
SFT2D1-204ENST00000487841 CUX1P39880 1505 aa19.6■□□□□ 0.73
SFT2D1-204ENST00000487841 CFTRP13569 1480 aa19.59■□□□□ 0.73
SFT2D1-204ENST00000487841 BIVM-ERCC5R4GMW8 1640 aa19.55■□□□□ 0.72
SFT2D1-204ENST00000487841 HNRNPUL2Q1KMD3 747 aaKnown RBP19.52■□□□□ 0.72
SFT2D1-204ENST00000487841 APLP2Q06481 763 aa19.49■□□□□ 0.71
SFT2D1-204ENST00000487841 VPS8Q8N3P4 1428 aa19.48■□□□□ 0.71
SFT2D1-204ENST00000487841 CC2D2AQ9P2K1 1620 aa19.46■□□□□ 0.71
SFT2D1-204ENST00000487841 PRXQ9BXM0 1461 aa19.46■□□□□ 0.71
SFT2D1-204ENST00000487841 CADPSQ9ULU8 1353 aa19.45■□□□□ 0.7
SFT2D1-204ENST00000487841 KIF27Q86VH2 1401 aa19.44■□□□□ 0.7
SFT2D1-204ENST00000487841 CUX2O14529 1486 aa19.36■□□□□ 0.69
SFT2D1-204ENST00000487841 KANK4Q5T7N3 995 aaPredicted RBP19.35■□□□□ 0.69
SFT2D1-204ENST00000487841 ERICH3Q5RHP9 1530 aa19.35■□□□□ 0.69
SFT2D1-204ENST00000487841 ARAP1Q96P48 1450 aa19.32■□□□□ 0.68
SFT2D1-204ENST00000487841 DNAJC5BQ9UF47 199 aa19.32■□□□□ 0.68
SFT2D1-204ENST00000487841 IGF1RP08069 1367 aa19.31■□□□□ 0.68
SFT2D1-204ENST00000487841 NESP48681 1621 aa19.3■□□□□ 0.68
SFT2D1-204ENST00000487841 FGD5Q6ZNL6 1462 aa19.3■□□□□ 0.68
SFT2D1-204ENST00000487841 FANCD2Q9BXW9 1451 aa19.27■□□□□ 0.68
SFT2D1-204ENST00000487841 PRDM2Q13029 1718 aa19.24■□□□□ 0.67
SFT2D1-204ENST00000487841 CARMIL1Q5VZK9 1371 aa19.22■□□□□ 0.67
SFT2D1-204ENST00000487841 ARHGAP35Q9NRY4 1499 aa19.22■□□□□ 0.67
SFT2D1-204ENST00000487841 P3H3Q8IVL6 736 aa19.22■□□□□ 0.67
SFT2D1-204ENST00000487841 RAD54L2Q9Y4B4 1467 aa19.21■□□□□ 0.67
SFT2D1-204ENST00000487841 DIEXFQ68CQ4 756 aaKnown RBP19.16■□□□□ 0.66
SFT2D1-204ENST00000487841 ITGAEP38570 1179 aa19.16■□□□□ 0.66
SFT2D1-204ENST00000487841 ATP1B4Q9UN42 357 aaPredicted RBP19.13■□□□□ 0.65
SFT2D1-204ENST00000487841 POLA1P09884 1462 aaPredicted RBP19.1■□□□□ 0.65
SFT2D1-204ENST00000487841 TOPBP1Q92547 1522 aa19.1■□□□□ 0.65
SFT2D1-204ENST00000487841 DNMBPQ6XZF7 1577 aa19.05■□□□□ 0.64
SFT2D1-204ENST00000487841 TDRD9Q8NDG6 1382 aaKnown RBP19.04■□□□□ 0.64
SFT2D1-204ENST00000487841 ZNF316A6NFI3 1004 aaPredicted RBP19.03■□□□□ 0.64
SFT2D1-204ENST00000487841 URB2Q14146 1524 aaKnown RBP19.01■□□□□ 0.63
SFT2D1-204ENST00000487841 ABCA10Q8WWZ4 1543 aa19■□□□□ 0.63
SFT2D1-204ENST00000487841 CCNB3Q8WWL7 1395 aa18.98■□□□□ 0.63
SFT2D1-204ENST00000487841 FHOD3Q2V2M9 1422 aa18.97■□□□□ 0.63
SFT2D1-204ENST00000487841 RRBP1Q9P2E9 1410 aaKnown RBP18.97■□□□□ 0.63
SFT2D1-204ENST00000487841 DHX57Q6P158 1386 aaKnown RBP18.95■□□□□ 0.62
SFT2D1-204ENST00000487841 SCAF1Q9H7N4 1312 aaKnown RBP18.94■□□□□ 0.62
SFT2D1-204ENST00000487841 LAMC3Q9Y6N6 1575 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms