RNA–Protein interactions for RNA: ENST00000487257.1

PDE12-202, Transcript of phosphodiesterase 12, humanhuman

TSL 1 (best) BASIC

Gene PDE12, Length 3,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE12-202ENST00000487257 TIAM1Q13009 1591 aa24.21■■□□□ 1.47
PDE12-202ENST00000487257 PHLDB1Q86UU1 1377 aa24.2■■□□□ 1.47
PDE12-202ENST00000487257 LRRC9Q6ZRR7 1453 aa24.17■■□□□ 1.46
PDE12-202ENST00000487257 NESP48681 1621 aa24.16■■□□□ 1.46
PDE12-202ENST00000487257 FHOD3Q2V2M9 1422 aa24.15■■□□□ 1.46
PDE12-202ENST00000487257 SIN3AQ96ST3 1273 aa24.11■■□□□ 1.45
PDE12-202ENST00000487257 FHAD1B1AJZ9 1412 aa24.09■■□□□ 1.45
PDE12-202ENST00000487257 SETD5Q9C0A6 1442 aa24.08■■□□□ 1.45
PDE12-202ENST00000487257 POLA1P09884 1462 aaPredicted RBP24.08■■□□□ 1.45
PDE12-202ENST00000487257 PCF11O94913 1555 aaKnown RBP24.08■■□□□ 1.44
PDE12-202ENST00000487257 MAPKBP1O60336 1514 aa24.06■■□□□ 1.44
PDE12-202ENST00000487257 MAP3K1Q13233 1512 aa24.05■■□□□ 1.44
PDE12-202ENST00000487257 TOPBP1Q92547 1522 aa24.05■■□□□ 1.44
PDE12-202ENST00000487257 DNMBPQ6XZF7 1577 aa24.01■■□□□ 1.43
PDE12-202ENST00000487257 KCNH8Q96L42 1107 aa24■■□□□ 1.43
PDE12-202ENST00000487257 ABCA10Q8WWZ4 1543 aa24■■□□□ 1.43
PDE12-202ENST00000487257 TDRD9Q8NDG6 1382 aaKnown RBP23.98■■□□□ 1.43
PDE12-202ENST00000487257 HIRIP3Q9BW71 556 aaPredicted RBP23.97■■□□□ 1.43
PDE12-202ENST00000487257 DNAJC5BQ9UF47 199 aa23.96■■□□□ 1.43
PDE12-202ENST00000487257 CFAP43Q8NDM7 1665 aa23.92■■□□□ 1.42
PDE12-202ENST00000487257 DDX10Q13206 875 aaKnown RBP23.92■■□□□ 1.42
PDE12-202ENST00000487257 WDR97A6NE52 1622 aa23.9■■□□□ 1.42
PDE12-202ENST00000487257 CASKIN1Q8WXD9 1431 aa23.89■■□□□ 1.42
PDE12-202ENST00000487257 FYCO1Q9BQS8 1478 aa23.89■■□□□ 1.42
PDE12-202ENST00000487257 URB2Q14146 1524 aaKnown RBP23.87■■□□□ 1.41
PDE12-202ENST00000487257 MTUS2Q5JR59 1369 aa23.86■■□□□ 1.41
PDE12-202ENST00000487257 EFCAB5A4FU69 1503 aa23.84■■□□□ 1.41
PDE12-202ENST00000487257 MYT1Q01538 1121 aa23.82■■□□□ 1.4
PDE12-202ENST00000487257 CUL7Q14999 1698 aa23.82■■□□□ 1.4
PDE12-202ENST00000487257 FMN1Q68DA7 1419 aa23.82■■□□□ 1.4
PDE12-202ENST00000487257 SUPT16HQ9Y5B9 1047 aaKnown RBP23.81■■□□□ 1.4
PDE12-202ENST00000487257 CTTNBP2Q8WZ74 1663 aa23.8■■□□□ 1.4
PDE12-202ENST00000487257 FGD6Q6ZV73 1430 aa23.79■■□□□ 1.4
PDE12-202ENST00000487257 AQRO60306 1485 aaKnown RBP eCLIP23.77■■□□□ 1.4
PDE12-202ENST00000487257 GAPVD1Q14C86 1478 aa23.76■■□□□ 1.39
PDE12-202ENST00000487257 SNAPC4Q5SXM2 1469 aa23.76■■□□□ 1.39
PDE12-202ENST00000487257 PPP1R15AO75807 674 aaPredicted RBP23.76■■□□□ 1.39
PDE12-202ENST00000487257 PTPRKQ15262 1439 aa23.75■■□□□ 1.39
PDE12-202ENST00000487257 ARID3CA6NKF2 412 aa23.75■■□□□ 1.39
PDE12-202ENST00000487257 LAMC3Q9Y6N6 1575 aa23.7■■□□□ 1.39
PDE12-202ENST00000487257 CHIC2Q9UKJ5 165 aa23.7■■□□□ 1.38
PDE12-202ENST00000487257 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.69■■□□□ 1.38
PDE12-202ENST00000487257 CCDC18Q5T9S5 1454 aa23.69■■□□□ 1.38
PDE12-202ENST00000487257 TONSLQ96HA7 1378 aa23.68■■□□□ 1.38
PDE12-202ENST00000487257 PDS5BQ9NTI5 1447 aa23.67■■□□□ 1.38
PDE12-202ENST00000487257 NCOA2Q15596 1464 aa23.67■■□□□ 1.38
PDE12-202ENST00000487257 RRP7BPQ9NSQ0 103 aa23.66■■□□□ 1.38
PDE12-202ENST00000487257 TIMELESSQ9UNS1 1208 aa23.66■■□□□ 1.38
PDE12-202ENST00000487257 ABCA5Q8WWZ7 1642 aa23.66■■□□□ 1.38
PDE12-202ENST00000487257 LRRIQ1Q96JM4 1722 aa23.65■■□□□ 1.38
PDE12-202ENST00000487257 MYOM3Q5VTT5 1437 aa23.62■■□□□ 1.37
PDE12-202ENST00000487257 SAMD9Q5K651 1589 aa23.61■■□□□ 1.37
PDE12-202ENST00000487257 GRIN2BQ13224 1484 aa23.61■■□□□ 1.37
PDE12-202ENST00000487257 HFM1A2PYH4 1435 aa23.61■■□□□ 1.37
PDE12-202ENST00000487257 BCANQ96GW7 911 aa23.6■■□□□ 1.37
PDE12-202ENST00000487257 NAIPQ13075 1403 aa23.59■■□□□ 1.37
PDE12-202ENST00000487257 TRIM52Q96A61 297 aa23.58■■□□□ 1.37
PDE12-202ENST00000487257 KIF21AQ7Z4S6 1674 aa23.58■■□□□ 1.37
PDE12-202ENST00000487257 UACAQ9BZF9 1416 aa23.58■■□□□ 1.36
PDE12-202ENST00000487257 PTPN23Q9H3S7 1636 aa23.57■■□□□ 1.36
PDE12-202ENST00000487257 ANP32CO43423 234 aa23.56■■□□□ 1.36
PDE12-202ENST00000487257 MAGI3Q5TCQ9 1506 aa23.55■■□□□ 1.36
PDE12-202ENST00000487257 SUPT6HQ7KZ85 1726 aaKnown RBP23.51■■□□□ 1.35
PDE12-202ENST00000487257 EHBP1L1Q8N3D4 1523 aa23.49■■□□□ 1.35
PDE12-202ENST00000487257 FKBP8Q14318 412 aa23.49■■□□□ 1.35
PDE12-202ENST00000487257 TARBP1Q13395 1621 aaKnown RBP23.48■■□□□ 1.35
PDE12-202ENST00000487257 FOXD1Q16676 465 aa23.47■■□□□ 1.35
PDE12-202ENST00000487257 UGGT2Q9NYU1 1516 aa23.46■■□□□ 1.35
PDE12-202ENST00000487257 CDK13Q14004 1512 aaKnown RBP23.45■■□□□ 1.34
PDE12-202ENST00000487257 THOC2Q8NI27 1593 aaKnown RBP23.42■■□□□ 1.34
PDE12-202ENST00000487257 EPRSP07814 1512 aaKnown RBP23.41■■□□□ 1.34
PDE12-202ENST00000487257 CCER2I3L3R5 266 aa23.4■■□□□ 1.34
PDE12-202ENST00000487257 TSHZ2Q9NRE2 1034 aa23.39■■□□□ 1.34
PDE12-202ENST00000487257 IQGAP2Q13576 1575 aa23.39■■□□□ 1.33
PDE12-202ENST00000487257 ARHGEF11O15085 1522 aa23.37■■□□□ 1.33
PDE12-202ENST00000487257 KDM6BO15054 1643 aa23.37■■□□□ 1.33
PDE12-202ENST00000487257 PBRM1Q86U86 1689 aa23.36■■□□□ 1.33
PDE12-202ENST00000487257 MPHOSPH9Q99550 1183 aa23.36■■□□□ 1.33
PDE12-202ENST00000487257 HSPA5P11021 654 aaKnown RBP23.35■■□□□ 1.33
PDE12-202ENST00000487257 HECW1Q76N89 1606 aa23.35■■□□□ 1.33
PDE12-202ENST00000487257 ZNF644Q9H582 1327 aaPredicted RBP23.35■■□□□ 1.33
PDE12-202ENST00000487257 DENND4BO75064 1496 aaPredicted RBP23.34■■□□□ 1.33
PDE12-202ENST00000487257 KDM5BQ9UGL1 1544 aa23.34■■□□□ 1.33
PDE12-202ENST00000487257 ZNF608Q9ULD9 1512 aaPredicted RBP23.34■■□□□ 1.33
PDE12-202ENST00000487257 WASHC2AQ641Q2 1341 aa23.31■■□□□ 1.32
PDE12-202ENST00000487257 L3MBTL2Q969R5 705 aa23.31■■□□□ 1.32
PDE12-202ENST00000487257 ADAMTS12P58397 1594 aa23.3■■□□□ 1.32
PDE12-202ENST00000487257 TCOF1Q13428 1488 aaKnown RBP23.3■■□□□ 1.32
PDE12-202ENST00000487257 NEFLP07196 543 aa23.3■■□□□ 1.32
PDE12-202ENST00000487257 MRC2Q9UBG0 1479 aa23.27■■□□□ 1.32
PDE12-202ENST00000487257 WDR62O43379 1518 aa23.26■■□□□ 1.31
PDE12-202ENST00000487257 EIF4G2P78344 907 aaKnown RBP eCLIP23.25■■□□□ 1.31
PDE12-202ENST00000487257 HNRNPUQ00839 825 aaKnown RBP eCLIP23.25■■□□□ 1.31
PDE12-202ENST00000487257 MIA2Q96PC5 1412 aa23.23■■□□□ 1.31
PDE12-202ENST00000487257 FBLN2P98095 1184 aa23.22■■□□□ 1.31
PDE12-202ENST00000487257 GCC2Q8IWJ2 1684 aa23.22■■□□□ 1.31
PDE12-202ENST00000487257 C11orf95C9JLR9 678 aaPredicted RBP23.22■■□□□ 1.31
PDE12-202ENST00000487257 SLC4A1APQ9BWU0 796 aaKnown RBP23.2■■□□□ 1.3
PDE12-202ENST00000487257 ZNF777Q9ULD5 760 aaPredicted RBP23.19■■□□□ 1.3
PDE12-202ENST00000487257 DAPK1P53355 1430 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms