RNA–Protein interactions for RNA: ENST00000487257.1

PDE12-202, Transcript of phosphodiesterase 12, humanhuman

TSL 1 (best) BASIC

Gene PDE12, Length 3,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE12-202ENST00000487257 NISCHQ9Y2I1 1504 aa34.2■■■■□ 3.07
PDE12-202ENST00000487257 SHROOM4Q9ULL8 1493 aa29.62■■■□□ 2.33
PDE12-202ENST00000487257 SUPT5HO00267 1087 aaKnown RBP29.07■■■□□ 2.24
PDE12-202ENST00000487257 ZCCHC6Q5VYS8 1495 aaKnown RBP28.9■■■□□ 2.22
PDE12-202ENST00000487257 DCAF8L2P0C7V8 631 aa28.85■■■□□ 2.21
PDE12-202ENST00000487257 CCDC180Q9P1Z9 1646 aa28.85■■■□□ 2.21
PDE12-202ENST00000487257 CHIC1Q5VXU3 224 aa28.11■■■□□ 2.09
PDE12-202ENST00000487257 MYO15BQ96JP2 1530 aa28.02■■■□□ 2.08
PDE12-202ENST00000487257 DCAF1Q9Y4B6 1507 aa27.86■■■□□ 2.05
PDE12-202ENST00000487257 LOC105371045A0A1W2PR82 267 aa27.46■■□□□ 1.99
PDE12-202ENST00000487257 PCGF6Q9BYE7 350 aa27.46■■□□□ 1.99
PDE12-202ENST00000487257 SCRIBQ14160 1630 aa27.37■■□□□ 1.97
PDE12-202ENST00000487257 HRCP23327 699 aa27.31■■□□□ 1.96
PDE12-202ENST00000487257 ABCC9O60706 1549 aa27.26■■□□□ 1.95
PDE12-202ENST00000487257 RSF1Q96T23 1441 aaPredicted RBP27.17■■□□□ 1.94
PDE12-202ENST00000487257 PPARGC1BQ86YN6 1023 aaKnown RBP26.97■■□□□ 1.91
PDE12-202ENST00000487257 TRIM41Q8WV44 630 aa26.95■■□□□ 1.91
PDE12-202ENST00000487257 FAM9AQ8IZU1 332 aaPredicted RBP26.93■■□□□ 1.9
PDE12-202ENST00000487257 RB1CC1Q8TDY2 1594 aa26.91■■□□□ 1.9
PDE12-202ENST00000487257 EHMT2Q96KQ7 1210 aa26.87■■□□□ 1.89
PDE12-202ENST00000487257 CECR2Q9BXF3 1484 aa26.84■■□□□ 1.89
PDE12-202ENST00000487257 NACADO15069 1562 aa26.75■■□□□ 1.87
PDE12-202ENST00000487257 TRIM26Q12899 539 aaPredicted RBP26.73■■□□□ 1.87
PDE12-202ENST00000487257 MROH2BQ7Z745 1585 aa26.69■■□□□ 1.86
PDE12-202ENST00000487257 WIZO95785 1651 aa26.55■■□□□ 1.84
PDE12-202ENST00000487257 BAZ1AQ9NRL2 1556 aaPredicted RBP26.23■■□□□ 1.79
PDE12-202ENST00000487257 PABPN1Q86U42 306 aaKnown RBP eCLIP26.07■■□□□ 1.76
PDE12-202ENST00000487257 ABCC8Q09428 1581 aa26.06■■□□□ 1.76
PDE12-202ENST00000487257 ZEB1P37275 1124 aaPredicted RBP26.05■■□□□ 1.76
PDE12-202ENST00000487257 EIF4G1Q04637 1599 aaKnown RBP26.03■■□□□ 1.76
PDE12-202ENST00000487257 CCDC88BA6NC98 1476 aa26.02■■□□□ 1.76
PDE12-202ENST00000487257 SMARCA4P51532 1647 aa26.02■■□□□ 1.76
PDE12-202ENST00000487257 TOP2AP11388 1531 aaKnown RBP26■■□□□ 1.75
PDE12-202ENST00000487257 UNC13AQ9UPW8 1703 aa25.98■■□□□ 1.75
PDE12-202ENST00000487257 TTBK1Q5TCY1 1321 aaPredicted RBP25.97■■□□□ 1.75
PDE12-202ENST00000487257 SMARCA2P51531 1590 aa25.9■■□□□ 1.74
PDE12-202ENST00000487257 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.85■■□□□ 1.73
PDE12-202ENST00000487257 SOGA1O94964 1423 aa25.84■■□□□ 1.73
PDE12-202ENST00000487257 RUSC2Q8N2Y8 1516 aa25.73■■□□□ 1.71
PDE12-202ENST00000487257 UBTFP17480 764 aaKnown RBP25.73■■□□□ 1.71
PDE12-202ENST00000487257 CCER1Q8TC90 406 aaPredicted RBP25.72■■□□□ 1.71
PDE12-202ENST00000487257 CEP162Q5TB80 1403 aa25.69■■□□□ 1.7
PDE12-202ENST00000487257 CSRNP3Q8WYN3 585 aa25.68■■□□□ 1.7
PDE12-202ENST00000487257 BICRAQ9NZM4 1560 aa25.68■■□□□ 1.7
PDE12-202ENST00000487257 TNIKQ9UKE5 1360 aa25.56■■□□□ 1.68
PDE12-202ENST00000487257 WRNQ14191 1432 aaPredicted RBP eCLIP25.53■■□□□ 1.68
PDE12-202ENST00000487257 EEA1Q15075 1411 aa25.46■■□□□ 1.67
PDE12-202ENST00000487257 RANGAP1P46060 587 aaPredicted RBP25.42■■□□□ 1.66
PDE12-202ENST00000487257 GOLGA3Q08378 1498 aa25.41■■□□□ 1.66
PDE12-202ENST00000487257 ATAD2BQ9ULI0 1458 aa25.39■■□□□ 1.66
PDE12-202ENST00000487257 SYNJ1O43426 1573 aa25.39■■□□□ 1.65
PDE12-202ENST00000487257 PEG3Q9GZU2 1588 aa25.39■■□□□ 1.65
PDE12-202ENST00000487257 BAZ1BQ9UIG0 1483 aaKnown RBP25.36■■□□□ 1.65
PDE12-202ENST00000487257 SCAF1Q9H7N4 1312 aaKnown RBP25.28■■□□□ 1.64
PDE12-202ENST00000487257 HNRNPUL2Q1KMD3 747 aaKnown RBP25.24■■□□□ 1.63
PDE12-202ENST00000487257 CEP164Q9UPV0 1460 aa25.24■■□□□ 1.63
PDE12-202ENST00000487257 CLIP1P30622 1438 aa25.2■■□□□ 1.63
PDE12-202ENST00000487257 DIEXFQ68CQ4 756 aaKnown RBP25.2■■□□□ 1.62
PDE12-202ENST00000487257 RAPGEF2Q9Y4G8 1499 aa25.17■■□□□ 1.62
PDE12-202ENST00000487257 KIF21BO75037 1637 aa25.11■■□□□ 1.61
PDE12-202ENST00000487257 APLP2Q06481 763 aa25.1■■□□□ 1.61
PDE12-202ENST00000487257 VPS8Q8N3P4 1428 aa25.03■■□□□ 1.6
PDE12-202ENST00000487257 NEUROD1Q13562 356 aa25.02■■□□□ 1.6
PDE12-202ENST00000487257 PELP1Q8IZL8 1130 aaKnown RBP25.02■■□□□ 1.6
PDE12-202ENST00000487257 TOP2BQ02880 1626 aa24.97■■□□□ 1.59
PDE12-202ENST00000487257 ACIN1Q9UKV3 1341 aaKnown RBP24.96■■□□□ 1.59
PDE12-202ENST00000487257 ZNF316A6NFI3 1004 aaPredicted RBP24.94■■□□□ 1.58
PDE12-202ENST00000487257 NCAPD3P42695 1498 aa24.82■■□□□ 1.56
PDE12-202ENST00000487257 BIVM-ERCC5R4GMW8 1640 aa24.82■■□□□ 1.56
PDE12-202ENST00000487257 CUX1P39880 1505 aa24.81■■□□□ 1.56
PDE12-202ENST00000487257 KANK4Q5T7N3 995 aaPredicted RBP24.8■■□□□ 1.56
PDE12-202ENST00000487257 PRXQ9BXM0 1461 aa24.79■■□□□ 1.56
PDE12-202ENST00000487257 CENPBP07199 599 aaPredicted RBP24.79■■□□□ 1.56
PDE12-202ENST00000487257 YTHDC1Q96MU7 727 aaKnown RBP24.79■■□□□ 1.56
PDE12-202ENST00000487257 GTF3C3Q9Y5Q9 886 aa24.78■■□□□ 1.56
PDE12-202ENST00000487257 HMGXB3Q12766 1538 aa24.74■■□□□ 1.55
PDE12-202ENST00000487257 ARAP1Q96P48 1450 aa24.73■■□□□ 1.55
PDE12-202ENST00000487257 KIF27Q86VH2 1401 aa24.72■■□□□ 1.55
PDE12-202ENST00000487257 ERICH3Q5RHP9 1530 aa24.7■■□□□ 1.54
PDE12-202ENST00000487257 MIER1Q8N108 512 aa24.69■■□□□ 1.54
PDE12-202ENST00000487257 CFTRP13569 1480 aa24.68■■□□□ 1.54
PDE12-202ENST00000487257 ITGAEP38570 1179 aa24.63■■□□□ 1.53
PDE12-202ENST00000487257 CUX2O14529 1486 aa24.54■■□□□ 1.52
PDE12-202ENST00000487257 DHX57Q6P158 1386 aaKnown RBP24.53■■□□□ 1.52
PDE12-202ENST00000487257 ARHGAP35Q9NRY4 1499 aa24.53■■□□□ 1.52
PDE12-202ENST00000487257 IGF1RP08069 1367 aa24.49■■□□□ 1.51
PDE12-202ENST00000487257 CADPSQ9ULU8 1353 aa24.45■■□□□ 1.5
PDE12-202ENST00000487257 P3H3Q8IVL6 736 aa24.44■■□□□ 1.5
PDE12-202ENST00000487257 CCNB3Q8WWL7 1395 aa24.42■■□□□ 1.5
PDE12-202ENST00000487257 RRBP1Q9P2E9 1410 aaKnown RBP24.41■■□□□ 1.5
PDE12-202ENST00000487257 ATP1B4Q9UN42 357 aaPredicted RBP24.4■■□□□ 1.5
PDE12-202ENST00000487257 CARMIL1Q5VZK9 1371 aa24.4■■□□□ 1.5
PDE12-202ENST00000487257 FGD5Q6ZNL6 1462 aa24.39■■□□□ 1.49
PDE12-202ENST00000487257 CLSPNQ9HAW4 1339 aa24.36■■□□□ 1.49
PDE12-202ENST00000487257 PRDM2Q13029 1718 aa24.28■■□□□ 1.48
PDE12-202ENST00000487257 FAM50AQ14320 339 aaKnown RBP24.27■■□□□ 1.48
PDE12-202ENST00000487257 CC2D2AQ9P2K1 1620 aa24.25■■□□□ 1.47
PDE12-202ENST00000487257 RAB3GAP2Q9H2M9 1393 aa24.24■■□□□ 1.47
PDE12-202ENST00000487257 FANCD2Q9BXW9 1451 aa24.23■■□□□ 1.47
PDE12-202ENST00000487257 RAD54L2Q9Y4B4 1467 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms