RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 MIER1Q8N108 512 aa18.14■□□□□ 0.49
PTCD2-204ENST00000486995 P3H3Q8IVL6 736 aa18.13■□□□□ 0.49
PTCD2-204ENST00000486995 ITGAEP38570 1179 aa18.13■□□□□ 0.49
PTCD2-204ENST00000486995 LAMC3Q9Y6N6 1575 aa18.11■□□□□ 0.49
PTCD2-204ENST00000486995 PHLDB1Q86UU1 1377 aa18.1■□□□□ 0.49
PTCD2-204ENST00000486995 URB2Q14146 1524 aaKnown RBP18.1■□□□□ 0.49
PTCD2-204ENST00000486995 PCF11O94913 1555 aaKnown RBP18.09■□□□□ 0.49
PTCD2-204ENST00000486995 CUL7Q14999 1698 aa18.09■□□□□ 0.49
PTCD2-204ENST00000486995 FHOD3Q2V2M9 1422 aa18.08■□□□□ 0.49
PTCD2-204ENST00000486995 RAB3GAP2Q9H2M9 1393 aa18.07■□□□□ 0.48
PTCD2-204ENST00000486995 CFAP43Q8NDM7 1665 aa18.06■□□□□ 0.48
PTCD2-204ENST00000486995 GTF3C3Q9Y5Q9 886 aa18.06■□□□□ 0.48
PTCD2-204ENST00000486995 EFCAB5A4FU69 1503 aa18.06■□□□□ 0.48
PTCD2-204ENST00000486995 WDR97A6NE52 1622 aa18.04■□□□□ 0.48
PTCD2-204ENST00000486995 FYCO1Q9BQS8 1478 aa18.03■□□□□ 0.48
PTCD2-204ENST00000486995 CASKIN1Q8WXD9 1431 aa18.03■□□□□ 0.48
PTCD2-204ENST00000486995 ATP1B4Q9UN42 357 aaPredicted RBP18.03■□□□□ 0.48
PTCD2-204ENST00000486995 AQRO60306 1485 aaKnown RBP eCLIP18.02■□□□□ 0.48
PTCD2-204ENST00000486995 DNAJC5BQ9UF47 199 aa18.02■□□□□ 0.48
PTCD2-204ENST00000486995 PELP1Q8IZL8 1130 aaKnown RBP18.02■□□□□ 0.47
PTCD2-204ENST00000486995 SETD5Q9C0A6 1442 aa18.01■□□□□ 0.47
PTCD2-204ENST00000486995 CTTNBP2Q8WZ74 1663 aa18.01■□□□□ 0.47
PTCD2-204ENST00000486995 TDRD9Q8NDG6 1382 aaKnown RBP18.01■□□□□ 0.47
PTCD2-204ENST00000486995 YTHDC1Q96MU7 727 aaKnown RBP18.01■□□□□ 0.47
PTCD2-204ENST00000486995 PDS5BQ9NTI5 1447 aa18■□□□□ 0.47
PTCD2-204ENST00000486995 FAM50AQ14320 339 aaKnown RBP17.99■□□□□ 0.47
PTCD2-204ENST00000486995 ABCA5Q8WWZ7 1642 aa17.99■□□□□ 0.47
PTCD2-204ENST00000486995 MAPKBP1O60336 1514 aa17.99■□□□□ 0.47
PTCD2-204ENST00000486995 GAPVD1Q14C86 1478 aa17.97■□□□□ 0.47
PTCD2-204ENST00000486995 FMN1Q68DA7 1419 aa17.96■□□□□ 0.47
PTCD2-204ENST00000486995 SNAPC4Q5SXM2 1469 aa17.94■□□□□ 0.46
PTCD2-204ENST00000486995 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.93■□□□□ 0.46
PTCD2-204ENST00000486995 SAMD9Q5K651 1589 aa17.91■□□□□ 0.46
PTCD2-204ENST00000486995 KIF21AQ7Z4S6 1674 aa17.89■□□□□ 0.46
PTCD2-204ENST00000486995 TARBP1Q13395 1621 aaKnown RBP17.87■□□□□ 0.45
PTCD2-204ENST00000486995 FGD6Q6ZV73 1430 aa17.86■□□□□ 0.45
PTCD2-204ENST00000486995 SIN3AQ96ST3 1273 aa17.84■□□□□ 0.45
PTCD2-204ENST00000486995 MTUS2Q5JR59 1369 aa17.84■□□□□ 0.45
PTCD2-204ENST00000486995 GRIN2BQ13224 1484 aa17.84■□□□□ 0.45
PTCD2-204ENST00000486995 LRRIQ1Q96JM4 1722 aa17.81■□□□□ 0.44
PTCD2-204ENST00000486995 THOC2Q8NI27 1593 aaKnown RBP17.78■□□□□ 0.44
PTCD2-204ENST00000486995 TIMELESSQ9UNS1 1208 aa17.78■□□□□ 0.44
PTCD2-204ENST00000486995 NCOA2Q15596 1464 aa17.78■□□□□ 0.44
PTCD2-204ENST00000486995 PTPRKQ15262 1439 aa17.77■□□□□ 0.44
PTCD2-204ENST00000486995 MYOM3Q5VTT5 1437 aa17.76■□□□□ 0.43
PTCD2-204ENST00000486995 HFM1A2PYH4 1435 aa17.74■□□□□ 0.43
PTCD2-204ENST00000486995 PBRM1Q86U86 1689 aa17.73■□□□□ 0.43
PTCD2-204ENST00000486995 EHBP1L1Q8N3D4 1523 aa17.73■□□□□ 0.43
PTCD2-204ENST00000486995 MRC2Q9UBG0 1479 aa17.72■□□□□ 0.43
PTCD2-204ENST00000486995 SUPT6HQ7KZ85 1726 aaKnown RBP17.72■□□□□ 0.43
PTCD2-204ENST00000486995 MAGI3Q5TCQ9 1506 aa17.71■□□□□ 0.43
PTCD2-204ENST00000486995 CCDC18Q5T9S5 1454 aa17.71■□□□□ 0.43
PTCD2-204ENST00000486995 ARHGEF11O15085 1522 aa17.71■□□□□ 0.42
PTCD2-204ENST00000486995 PPP1R15AO75807 674 aaPredicted RBP17.7■□□□□ 0.42
PTCD2-204ENST00000486995 ADAMTS12P58397 1594 aa17.7■□□□□ 0.42
PTCD2-204ENST00000486995 UGGT2Q9NYU1 1516 aa17.7■□□□□ 0.42
PTCD2-204ENST00000486995 IQGAP2Q13576 1575 aa17.69■□□□□ 0.42
PTCD2-204ENST00000486995 PTPN23Q9H3S7 1636 aa17.69■□□□□ 0.42
PTCD2-204ENST00000486995 NAIPQ13075 1403 aa17.68■□□□□ 0.42
PTCD2-204ENST00000486995 UACAQ9BZF9 1416 aa17.68■□□□□ 0.42
PTCD2-204ENST00000486995 HECW1Q76N89 1606 aa17.65■□□□□ 0.42
PTCD2-204ENST00000486995 EPRSP07814 1512 aaKnown RBP17.64■□□□□ 0.41
PTCD2-204ENST00000486995 TCOF1Q13428 1488 aaKnown RBP17.63■□□□□ 0.41
PTCD2-204ENST00000486995 ZNF608Q9ULD9 1512 aaPredicted RBP17.62■□□□□ 0.41
PTCD2-204ENST00000486995 IFT140Q96RY7 1462 aa17.62■□□□□ 0.41
PTCD2-204ENST00000486995 DDX10Q13206 875 aaKnown RBP17.62■□□□□ 0.41
PTCD2-204ENST00000486995 TONSLQ96HA7 1378 aa17.6■□□□□ 0.41
PTCD2-204ENST00000486995 KCNH8Q96L42 1107 aa17.59■□□□□ 0.41
PTCD2-204ENST00000486995 WDR62O43379 1518 aa17.59■□□□□ 0.41
PTCD2-204ENST00000486995 CDK13Q14004 1512 aaKnown RBP17.59■□□□□ 0.41
PTCD2-204ENST00000486995 HIRIP3Q9BW71 556 aaPredicted RBP17.57■□□□□ 0.4
PTCD2-204ENST00000486995 RRP7BPQ9NSQ0 103 aa17.57■□□□□ 0.4
PTCD2-204ENST00000486995 CHIC2Q9UKJ5 165 aa17.56■□□□□ 0.4
PTCD2-204ENST00000486995 MIA2Q96PC5 1412 aa17.56■□□□□ 0.4
PTCD2-204ENST00000486995 KIAA0586Q9BVV6 1533 aa17.55■□□□□ 0.4
PTCD2-204ENST00000486995 ARID3CA6NKF2 412 aa17.54■□□□□ 0.4
PTCD2-204ENST00000486995 DISP1Q96F81 1524 aa17.53■□□□□ 0.4
PTCD2-204ENST00000486995 AKNAQ7Z591 1439 aa17.53■□□□□ 0.4
PTCD2-204ENST00000486995 GCC2Q8IWJ2 1684 aa17.51■□□□□ 0.39
PTCD2-204ENST00000486995 KIAA0556O60303 1618 aa17.51■□□□□ 0.39
PTCD2-204ENST00000486995 KDM5BQ9UGL1 1544 aa17.51■□□□□ 0.39
PTCD2-204ENST00000486995 DENND4BO75064 1496 aaPredicted RBP17.5■□□□□ 0.39
PTCD2-204ENST00000486995 GRIN2AQ12879 1464 aa17.49■□□□□ 0.39
PTCD2-204ENST00000486995 KDM6BO15054 1643 aa17.48■□□□□ 0.39
PTCD2-204ENST00000486995 NUP153P49790 1475 aaKnown RBP17.47■□□□□ 0.39
PTCD2-204ENST00000486995 EIF4G3O43432 1585 aaKnown RBP17.47■□□□□ 0.39
PTCD2-204ENST00000486995 TRIM52Q96A61 297 aa17.47■□□□□ 0.39
PTCD2-204ENST00000486995 SUPT16HQ9Y5B9 1047 aaKnown RBP17.47■□□□□ 0.39
PTCD2-204ENST00000486995 MPHOSPH9Q99550 1183 aa17.44■□□□□ 0.38
PTCD2-204ENST00000486995 RAPGEF6Q8TEU7 1601 aa17.43■□□□□ 0.38
PTCD2-204ENST00000486995 CCER2I3L3R5 266 aa17.43■□□□□ 0.38
PTCD2-204ENST00000486995 DAPK1P53355 1430 aa17.42■□□□□ 0.38
PTCD2-204ENST00000486995 ANP32CO43423 234 aa17.42■□□□□ 0.38
PTCD2-204ENST00000486995 ROCK1Q13464 1354 aa17.42■□□□□ 0.38
PTCD2-204ENST00000486995 ABCC5O15440 1437 aa17.41■□□□□ 0.38
PTCD2-204ENST00000486995 ZNF644Q9H582 1327 aaPredicted RBP17.41■□□□□ 0.38
PTCD2-204ENST00000486995 CDK11AQ9UQ88 783 aaPredicted RBP17.4■□□□□ 0.38
PTCD2-204ENST00000486995 MAGI1Q96QZ7 1491 aaPredicted RBP17.4■□□□□ 0.38
PTCD2-204ENST00000486995 ERCC6Q03468 1493 aa17.4■□□□□ 0.38
PTCD2-204ENST00000486995 CHMP7Q8WUX9 453 aaPredicted RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms