RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 MSH5O43196 834 aa17.43■□□□□ 0.38
HSPG2-211ENST00000486901 PPP1R15AO75807 674 aaPredicted RBP17.43■□□□□ 0.38
HSPG2-211ENST00000486901 RRBP1Q9P2E9 1410 aaKnown RBP17.41■□□□□ 0.38
HSPG2-211ENST00000486901 PHLDB1Q86UU1 1377 aa17.4■□□□□ 0.38
HSPG2-211ENST00000486901 ARID3CA6NKF2 412 aa17.4■□□□□ 0.38
HSPG2-211ENST00000486901 ARHGAP35Q9NRY4 1499 aa17.39■□□□□ 0.37
HSPG2-211ENST00000486901 PRXQ9BXM0 1461 aa17.39■□□□□ 0.37
HSPG2-211ENST00000486901 ERICH6Q7L0X2 663 aa17.38■□□□□ 0.37
HSPG2-211ENST00000486901 SETD5Q9C0A6 1442 aa17.38■□□□□ 0.37
HSPG2-211ENST00000486901 MAPKBP1O60336 1514 aa17.37■□□□□ 0.37
HSPG2-211ENST00000486901 KIF27Q86VH2 1401 aa17.36■□□□□ 0.37
HSPG2-211ENST00000486901 CHIC2Q9UKJ5 165 aa17.35■□□□□ 0.37
HSPG2-211ENST00000486901 FAM9BQ8IZU0 186 aa17.33■□□□□ 0.37
HSPG2-211ENST00000486901 CCDC184Q52MB2 194 aa17.32■□□□□ 0.36
HSPG2-211ENST00000486901 TONSLQ96HA7 1378 aa17.31■□□□□ 0.36
HSPG2-211ENST00000486901 POLR3GLQ9BT43 218 aa17.31■□□□□ 0.36
HSPG2-211ENST00000486901 TOP2BQ02880 1626 aa17.3■□□□□ 0.36
HSPG2-211ENST00000486901 B4GALNT3Q6L9W6 998 aa17.29■□□□□ 0.36
HSPG2-211ENST00000486901 CUX2O14529 1486 aa17.28■□□□□ 0.36
HSPG2-211ENST00000486901 CUX1P39880 1505 aa17.28■□□□□ 0.36
HSPG2-211ENST00000486901 FOXD1Q16676 465 aa17.28■□□□□ 0.36
HSPG2-211ENST00000486901 RRP7BPQ9NSQ0 103 aa17.28■□□□□ 0.36
HSPG2-211ENST00000486901 CDK11AQ9UQ88 783 aaPredicted RBP17.27■□□□□ 0.36
HSPG2-211ENST00000486901 NBR1Q14596 966 aa17.23■□□□□ 0.35
HSPG2-211ENST00000486901 FHOD3Q2V2M9 1422 aa17.23■□□□□ 0.35
HSPG2-211ENST00000486901 IGF1RP08069 1367 aa17.22■□□□□ 0.35
HSPG2-211ENST00000486901 CARMIL1Q5VZK9 1371 aa17.22■□□□□ 0.35
HSPG2-211ENST00000486901 CCER2I3L3R5 266 aa17.2■□□□□ 0.34
HSPG2-211ENST00000486901 ERICH3Q5RHP9 1530 aa17.2■□□□□ 0.34
HSPG2-211ENST00000486901 HSPA5P11021 654 aaKnown RBP17.17■□□□□ 0.34
HSPG2-211ENST00000486901 LRRC9Q6ZRR7 1453 aa17.17■□□□□ 0.34
HSPG2-211ENST00000486901 ZNF326Q5BKZ1 582 aaKnown RBP17.13■□□□□ 0.33
HSPG2-211ENST00000486901 MRS2Q9HD23 443 aa17.13■□□□□ 0.33
HSPG2-211ENST00000486901 WASHC2AQ641Q2 1341 aa17.12■□□□□ 0.33
HSPG2-211ENST00000486901 TIAM1Q13009 1591 aa17.11■□□□□ 0.33
HSPG2-211ENST00000486901 C11orf95C9JLR9 678 aaPredicted RBP17.11■□□□□ 0.33
HSPG2-211ENST00000486901 MTUS2Q5JR59 1369 aa17.09■□□□□ 0.33
HSPG2-211ENST00000486901 SALL2Q9Y467 1007 aaPredicted RBP17.07■□□□□ 0.32
HSPG2-211ENST00000486901 BIVM-ERCC5R4GMW8 1640 aa17.07■□□□□ 0.32
HSPG2-211ENST00000486901 PTPRKQ15262 1439 aa17.06■□□□□ 0.32
HSPG2-211ENST00000486901 AQRO60306 1485 aaKnown RBP eCLIP17.04■□□□□ 0.323e-7■■□□□ 12.8
HSPG2-211ENST00000486901 PAK3O75914 559 aaPredicted RBP17.04■□□□□ 0.32
HSPG2-211ENST00000486901 NCAPD3P42695 1498 aa17.04■□□□□ 0.32
HSPG2-211ENST00000486901 DEKP35659 375 aaKnown RBP17.02■□□□□ 0.32
HSPG2-211ENST00000486901 EIF4G2P78344 907 aaKnown RBP eCLIP17.02■□□□□ 0.32
HSPG2-211ENST00000486901 L3MBTL2Q969R5 705 aa17.02■□□□□ 0.32
HSPG2-211ENST00000486901 CCDC18Q5T9S5 1454 aa17.02■□□□□ 0.31
HSPG2-211ENST00000486901 PPP4R2Q9NY27 417 aa17.01■□□□□ 0.31
HSPG2-211ENST00000486901 FBLN2P98095 1184 aa17.01■□□□□ 0.31
HSPG2-211ENST00000486901 RAD54L2Q9Y4B4 1467 aa17.01■□□□□ 0.31
HSPG2-211ENST00000486901 HMGXB3Q12766 1538 aa17.01■□□□□ 0.31
HSPG2-211ENST00000486901 NPM2Q86SE8 214 aaKnown RBP17■□□□□ 0.31
HSPG2-211ENST00000486901 PCF11O94913 1555 aaKnown RBP17■□□□□ 0.31
HSPG2-211ENST00000486901 FGD5Q6ZNL6 1462 aa17■□□□□ 0.31
HSPG2-211ENST00000486901 TIMELESSQ9UNS1 1208 aa16.99■□□□□ 0.31
HSPG2-211ENST00000486901 FHAD1B1AJZ9 1412 aa16.98■□□□□ 0.31
HSPG2-211ENST00000486901 FANCIQ9NVI1 1328 aa16.96■□□□□ 0.31
HSPG2-211ENST00000486901 PRKRIP1Q9H875 184 aaPredicted RBP16.95■□□□□ 0.3
HSPG2-211ENST00000486901 FGD6Q6ZV73 1430 aa16.95■□□□□ 0.3
HSPG2-211ENST00000486901 CFTRP13569 1480 aa16.95■□□□□ 0.3
HSPG2-211ENST00000486901 NBPF8Q3BBV2 869 aa16.93■□□□□ 0.3
HSPG2-211ENST00000486901 RTN4Q9NQC3 1192 aaKnown RBP16.93■□□□□ 0.3
HSPG2-211ENST00000486901 TDRD9Q8NDG6 1382 aaKnown RBP16.92■□□□□ 0.3
HSPG2-211ENST00000486901 CCDC136Q96JN2 1154 aa16.92■□□□□ 0.3
HSPG2-211ENST00000486901 AKNAQ7Z591 1439 aa16.91■□□□□ 0.3
HSPG2-211ENST00000486901 MPHOSPH9Q99550 1183 aa16.9■□□□□ 0.3
HSPG2-211ENST00000486901 NOP58Q9Y2X3 529 aaKnown RBP16.89■□□□□ 0.29
HSPG2-211ENST00000486901 UACAQ9BZF9 1416 aa16.88■□□□□ 0.29
HSPG2-211ENST00000486901 NAIPQ13075 1403 aa16.87■□□□□ 0.29
HSPG2-211ENST00000486901 CADPSQ9ULU8 1353 aa16.85■□□□□ 0.29
HSPG2-211ENST00000486901 SKAP1Q86WV1 359 aa16.85■□□□□ 0.29
HSPG2-211ENST00000486901 ZNF644Q9H582 1327 aaPredicted RBP16.85■□□□□ 0.29
HSPG2-211ENST00000486901 SLC4A1APQ9BWU0 796 aaKnown RBP16.84■□□□□ 0.29
HSPG2-211ENST00000486901 ZNF777Q9ULD5 760 aaPredicted RBP16.84■□□□□ 0.29
HSPG2-211ENST00000486901 LAS1LQ9Y4W2 734 aaKnown RBP16.84■□□□□ 0.29
HSPG2-211ENST00000486901 KIF7Q2M1P5 1343 aa16.83■□□□□ 0.29
HSPG2-211ENST00000486901 KDM2AQ9Y2K7 1162 aa16.82■□□□□ 0.28
HSPG2-211ENST00000486901 HFM1A2PYH4 1435 aa16.82■□□□□ 0.28
HSPG2-211ENST00000486901 CCDC7Q96M83 1385 aa16.81■□□□□ 0.28
HSPG2-211ENST00000486901 NCOA2Q15596 1464 aa16.8■□□□□ 0.28
HSPG2-211ENST00000486901 FMN1Q68DA7 1419 aa16.8■□□□□ 0.28
HSPG2-211ENST00000486901 CASKIN1Q8WXD9 1431 aa16.8■□□□□ 0.28
HSPG2-211ENST00000486901 DNAJC5BQ9UF47 199 aa16.79■□□□□ 0.28
HSPG2-211ENST00000486901 CNTLNQ9NXG0 1405 aa16.78■□□□□ 0.28
HSPG2-211ENST00000486901 ZBED9Q6R2W3 1325 aa16.78■□□□□ 0.28
HSPG2-211ENST00000486901 ANP32AP39687 249 aaKnown RBP16.78■□□□□ 0.28
HSPG2-211ENST00000486901 NESP48681 1621 aa16.78■□□□□ 0.28
HSPG2-211ENST00000486901 MAP3K1Q13233 1512 aa16.77■□□□□ 0.28
HSPG2-211ENST00000486901 RTL5Q5HYW3 569 aaPredicted RBP16.77■□□□□ 0.28
HSPG2-211ENST00000486901 ZBTB47Q9UFB7 747 aaPredicted RBP16.77■□□□□ 0.27
HSPG2-211ENST00000486901 PTPN23Q9H3S7 1636 aa16.76■□□□□ 0.27
HSPG2-211ENST00000486901 TMC1Q8TDI8 760 aa16.76■□□□□ 0.27
HSPG2-211ENST00000486901 MYOM3Q5VTT5 1437 aa16.75■□□□□ 0.27
HSPG2-211ENST00000486901 FYCO1Q9BQS8 1478 aa16.75■□□□□ 0.27
HSPG2-211ENST00000486901 ANO8Q9HCE9 1232 aaPredicted RBP16.74■□□□□ 0.27
HSPG2-211ENST00000486901 FANCD2Q9BXW9 1451 aa16.73■□□□□ 0.27
HSPG2-211ENST00000486901 IL27Q8NEV9 243 aa16.73■□□□□ 0.27
HSPG2-211ENST00000486901 KDM5BQ9UGL1 1544 aa16.72■□□□□ 0.27
HSPG2-211ENST00000486901 KDM6BO15054 1643 aa16.71■□□□□ 0.27
HSPG2-211ENST00000486901 EXOC6Q8TAG9 804 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms