RNA–Protein interactions for RNA: ENST00000485376.5

MTMR1-209, Transcript of myotubularin related protein 1, human

TSL 1 (best)

Gene MTMR1, Length 2,973 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MTMR1-209	ENST00000485376	POLA1	P09884	1462 aa	Predicted RBP	33.62	■■■□□ 2.97
MTMR1-209	ENST00000485376	TDRD9	Q8NDG6	1382 aa	Known RBP	33.6	■■■□□ 2.97
MTMR1-209	ENST00000485376	TOPBP1	Q92547	1522 aa		33.59	■■■□□ 2.97
MTMR1-209	ENST00000485376	PHLDB1	Q86UU1	1377 aa		33.56	■■■□□ 2.96
MTMR1-209	ENST00000485376	RAB3GAP2	Q9H2M9	1393 aa		33.51	■■■□□ 2.96
MTMR1-209	ENST00000485376	TIAM1	Q13009	1591 aa		33.5	■■■□□ 2.95
MTMR1-209	ENST00000485376	DNMBP	Q6XZF7	1577 aa		33.48	■■■□□ 2.95
MTMR1-209	ENST00000485376	LRRC9	Q6ZRR7	1453 aa		33.46	■■■□□ 2.95
MTMR1-209	ENST00000485376	SIN3A	Q96ST3	1273 aa		33.42	■■■□□ 2.94
MTMR1-209	ENST00000485376	PCF11	O94913	1555 aa	Known RBP	33.41	■■■□□ 2.94
MTMR1-209	ENST00000485376	ABCA10	Q8WWZ4	1543 aa		33.41	■■■□□ 2.94
MTMR1-209	ENST00000485376	URB2	Q14146	1524 aa	Known RBP	33.4	■■■□□ 2.94
MTMR1-209	ENST00000485376	CLSPN	Q9HAW4	1339 aa		33.38	■■■□□ 2.93
MTMR1-209	ENST00000485376	FHAD1	B1AJZ9	1412 aa		33.36	■■■□□ 2.93
MTMR1-209	ENST00000485376	ARID3C	A6NKF2	412 aa		33.35	■■■□□ 2.93
MTMR1-209	ENST00000485376	HIRIP3	Q9BW71	556 aa	Predicted RBP	33.26	■■■□□ 2.92
MTMR1-209	ENST00000485376	SETD5	Q9C0A6	1442 aa		33.26	■■■□□ 2.91
MTMR1-209	ENST00000485376	GAPVD1	Q14C86	1478 aa		33.18	■■■□□ 2.9
MTMR1-209	ENST00000485376	MAPKBP1	O60336	1514 aa		33.17	■■■□□ 2.9
MTMR1-209	ENST00000485376	MTUS2	Q5JR59	1369 aa		33.15	■■■□□ 2.9
MTMR1-209	ENST00000485376	MAP3K1	Q13233	1512 aa		33.14	■■■□□ 2.9
MTMR1-209	ENST00000485376	PDS5B	Q9NTI5	1447 aa		33.13	■■■□□ 2.89
MTMR1-209	ENST00000485376	LAMC3	Q9Y6N6	1575 aa		33.13	■■■□□ 2.89
MTMR1-209	ENST00000485376	CASKIN1	Q8WXD9	1431 aa		33.12	■■■□□ 2.89
MTMR1-209	ENST00000485376	KCNH8	Q96L42	1107 aa		33.09	■■■□□ 2.89
MTMR1-209	ENST00000485376	FYCO1	Q9BQS8	1478 aa		33.08	■■■□□ 2.89
MTMR1-209	ENST00000485376	CUL7	Q14999	1698 aa		33.08	■■■□□ 2.89
MTMR1-209	ENST00000485376	CFAP43	Q8NDM7	1665 aa		33.07	■■■□□ 2.88
MTMR1-209	ENST00000485376	KIF21A	Q7Z4S6	1674 aa		33.06	■■■□□ 2.88
MTMR1-209	ENST00000485376	CTTNBP2	Q8WZ74	1663 aa		33.05	■■■□□ 2.88
MTMR1-209	ENST00000485376	AQR	O60306	1485 aa	Known RBP eCLIP	33.05	■■■□□ 2.88	3e-7	■■■■■ 30.5
MTMR1-209	ENST00000485376	CHIC2	Q9UKJ5	165 aa		33.03	■■■□□ 2.88
MTMR1-209	ENST00000485376	FMN1	Q68DA7	1419 aa		33.03	■■■□□ 2.88
MTMR1-209	ENST00000485376	EFCAB5	A4FU69	1503 aa		33.02	■■■□□ 2.88
MTMR1-209	ENST00000485376	DDX10	Q13206	875 aa	Known RBP	33.01	■■■□□ 2.87
MTMR1-209	ENST00000485376	SNAPC4	Q5SXM2	1469 aa		32.97	■■■□□ 2.87
MTMR1-209	ENST00000485376	WDR97	A6NE52	1622 aa		32.96	■■■□□ 2.87
MTMR1-209	ENST00000485376	FGD6	Q6ZV73	1430 aa		32.95	■■■□□ 2.87
MTMR1-209	ENST00000485376	ABCA5	Q8WWZ7	1642 aa		32.95	■■■□□ 2.87
MTMR1-209	ENST00000485376	RRP7BP	Q9NSQ0	103 aa		32.94	■■■□□ 2.86
MTMR1-209	ENST00000485376	PTPRK	Q15262	1439 aa		32.94	■■■□□ 2.86
MTMR1-209	ENST00000485376	NCOA2	Q15596	1464 aa		32.85	■■■□□ 2.85
MTMR1-209	ENST00000485376	LRRIQ1	Q96JM4	1722 aa		32.84	■■■□□ 2.85
MTMR1-209	ENST00000485376	PELP1	Q8IZL8	1130 aa	Known RBP	32.79	■■■□□ 2.84
MTMR1-209	ENST00000485376	TARBP1	Q13395	1621 aa	Known RBP	32.78	■■■□□ 2.84
MTMR1-209	ENST00000485376	SAMD9	Q5K651	1589 aa		32.77	■■■□□ 2.84
MTMR1-209	ENST00000485376	GRIN2B	Q13224	1484 aa		32.77	■■■□□ 2.84
MTMR1-209	ENST00000485376	PPP1R15A	O75807	674 aa	Predicted RBP	32.76	■■■□□ 2.84
MTMR1-209	ENST00000485376	TRIM52	Q96A61	297 aa		32.76	■■■□□ 2.84
MTMR1-209	ENST00000485376	CCDC18	Q5T9S5	1454 aa		32.76	■■■□□ 2.84
MTMR1-209	ENST00000485376	ZNF608	Q9ULD9	1512 aa	Predicted RBP	32.74	■■■□□ 2.83
MTMR1-209	ENST00000485376	MAGI3	Q5TCQ9	1506 aa		32.73	■■■□□ 2.83
MTMR1-209	ENST00000485376	MYOM3	Q5VTT5	1437 aa		32.72	■■■□□ 2.83
MTMR1-209	ENST00000485376	FBLN2	P98095	1184 aa		32.72	■■■□□ 2.83
MTMR1-209	ENST00000485376	TONSL	Q96HA7	1378 aa		32.72	■■■□□ 2.83
MTMR1-209	ENST00000485376	CDK13	Q14004	1512 aa	Known RBP	32.69	■■■□□ 2.82
MTMR1-209	ENST00000485376	FOXD1	Q16676	465 aa		32.68	■■■□□ 2.82
MTMR1-209	ENST00000485376	NAIP	Q13075	1403 aa		32.64	■■■□□ 2.82
MTMR1-209	ENST00000485376	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	32.63	■■■□□ 2.81
MTMR1-209	ENST00000485376	HFM1	A2PYH4	1435 aa		32.61	■■■□□ 2.81
MTMR1-209	ENST00000485376	PBRM1	Q86U86	1689 aa		32.6	■■■□□ 2.81
MTMR1-209	ENST00000485376	MRC2	Q9UBG0	1479 aa		32.59	■■■□□ 2.81
MTMR1-209	ENST00000485376	SUPT6H	Q7KZ85	1726 aa	Known RBP	32.58	■■■□□ 2.81
MTMR1-209	ENST00000485376	PTPN23	Q9H3S7	1636 aa		32.57	■■■□□ 2.81
MTMR1-209	ENST00000485376	IQGAP2	Q13576	1575 aa		32.57	■■■□□ 2.8
MTMR1-209	ENST00000485376	ZNF644	Q9H582	1327 aa	Predicted RBP	32.57	■■■□□ 2.8
MTMR1-209	ENST00000485376	UACA	Q9BZF9	1416 aa		32.54	■■■□□ 2.8
MTMR1-209	ENST00000485376	EHBP1L1	Q8N3D4	1523 aa		32.54	■■■□□ 2.8
MTMR1-209	ENST00000485376	EPRS	P07814	1512 aa	Known RBP	32.53	■■■□□ 2.8
MTMR1-209	ENST00000485376	SUPT16H	Q9Y5B9	1047 aa	Known RBP	32.51	■■■□□ 2.79
MTMR1-209	ENST00000485376	UGGT2	Q9NYU1	1516 aa		32.5	■■■□□ 2.79
MTMR1-209	ENST00000485376	ADAMTS12	P58397	1594 aa		32.5	■■■□□ 2.79
MTMR1-209	ENST00000485376	TIMELESS	Q9UNS1	1208 aa		32.48	■■■□□ 2.79
MTMR1-209	ENST00000485376	THOC2	Q8NI27	1593 aa	Known RBP	32.47	■■■□□ 2.79
MTMR1-209	ENST00000485376	BCAN	Q96GW7	911 aa		32.46	■■■□□ 2.79
MTMR1-209	ENST00000485376	CHMP7	Q8WUX9	453 aa	Predicted RBP	32.44	■■■□□ 2.78
MTMR1-209	ENST00000485376	ZNF777	Q9ULD5	760 aa	Predicted RBP	32.44	■■■□□ 2.78
MTMR1-209	ENST00000485376	KDM6B	O15054	1643 aa		32.42	■■■□□ 2.78
MTMR1-209	ENST00000485376	HECW1	Q76N89	1606 aa		32.41	■■■□□ 2.78
MTMR1-209	ENST00000485376	ANP32C	O43423	234 aa		32.41	■■■□□ 2.78
MTMR1-209	ENST00000485376	ERCC6	Q03468	1493 aa		32.4	■■■□□ 2.78
MTMR1-209	ENST00000485376	MPHOSPH9	Q99550	1183 aa		32.38	■■■□□ 2.77
MTMR1-209	ENST00000485376	ARHGEF11	O15085	1522 aa		32.34	■■■□□ 2.77
MTMR1-209	ENST00000485376	IFT140	Q96RY7	1462 aa		32.33	■■■□□ 2.77
MTMR1-209	ENST00000485376	WDR62	O43379	1518 aa		32.33	■■■□□ 2.77
MTMR1-209	ENST00000485376	DISP1	Q96F81	1524 aa		32.29	■■■□□ 2.76
MTMR1-209	ENST00000485376	DENND4B	O75064	1496 aa	Predicted RBP	32.28	■■■□□ 2.76
MTMR1-209	ENST00000485376	HSPA5	P11021	654 aa	Known RBP	32.28	■■■□□ 2.76
MTMR1-209	ENST00000485376	L3MBTL2	Q969R5	705 aa		32.28	■■■□□ 2.76
MTMR1-209	ENST00000485376	PRG4	Q92954	1404 aa	Predicted RBP	32.26	■■■□□ 2.75
MTMR1-209	ENST00000485376	CNGB1	Q14028	1251 aa	Predicted RBP	32.26	■■■□□ 2.75
MTMR1-209	ENST00000485376	KIAA0586	Q9BVV6	1533 aa		32.24	■■■□□ 2.75
MTMR1-209	ENST00000485376	NUP153	P49790	1475 aa	Known RBP	32.24	■■■□□ 2.75
MTMR1-209	ENST00000485376	GRIN2A	Q12879	1464 aa		32.24	■■■□□ 2.75
MTMR1-209	ENST00000485376	SLC4A1AP	Q9BWU0	796 aa	Known RBP	32.22	■■■□□ 2.75
MTMR1-209	ENST00000485376	TCOF1	Q13428	1488 aa	Known RBP	32.22	■■■□□ 2.75
MTMR1-209	ENST00000485376	EIF4G3	O43432	1585 aa	Known RBP	32.22	■■■□□ 2.75
MTMR1-209	ENST00000485376	PLB1	Q6P1J6	1458 aa		32.22	■■■□□ 2.75
MTMR1-209	ENST00000485376	CFDP1	Q9UEE9	299 aa	Predicted RBP	32.21	■■■□□ 2.75
MTMR1-209	ENST00000485376	FKBP8	Q14318	412 aa		32.2	■■■□□ 2.75

Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms