RNA–Protein interactions for RNA: ENST00000485376.5

MTMR1-209, Transcript of myotubularin related protein 1, humanhuman

TSL 1 (best)

Gene MTMR1, Length 2,973 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTMR1-209ENST00000485376 NISCHQ9Y2I1 1504 aa47.58■■■■■ 5.21
MTMR1-209ENST00000485376 SHROOM4Q9ULL8 1493 aa41.31■■■■■ 4.2
MTMR1-209ENST00000485376 DCAF8L2P0C7V8 631 aa40.54■■■■■ 4.08
MTMR1-209ENST00000485376 SUPT5HO00267 1087 aaKnown RBP40.42■■■■■ 4.06
MTMR1-209ENST00000485376 CCDC180Q9P1Z9 1646 aa40.14■■■■■ 4.02
MTMR1-209ENST00000485376 ZCCHC6Q5VYS8 1495 aaKnown RBP40.13■■■■■ 4.01
MTMR1-209ENST00000485376 CHIC1Q5VXU3 224 aa38.82■■■■□ 3.8
MTMR1-209ENST00000485376 MYO15BQ96JP2 1530 aa38.65■■■■□ 3.78
MTMR1-209ENST00000485376 DCAF1Q9Y4B6 1507 aa38.61■■■■□ 3.77
MTMR1-209ENST00000485376 SCRIBQ14160 1630 aa38.26■■■■□ 3.71
MTMR1-209ENST00000485376 ABCC9O60706 1549 aa38.19■■■■□ 3.7
MTMR1-209ENST00000485376 LOC105371045A0A1W2PR82 267 aa38.04■■■■□ 3.68
MTMR1-209ENST00000485376 PCGF6Q9BYE7 350 aa37.76■■■■□ 3.64
MTMR1-209ENST00000485376 RSF1Q96T23 1441 aaPredicted RBP37.74■■■■□ 3.63
MTMR1-209ENST00000485376 EHMT2Q96KQ7 1210 aa37.55■■■■□ 3.6
MTMR1-209ENST00000485376 FAM9AQ8IZU1 332 aaPredicted RBP37.5■■■■□ 3.59
MTMR1-209ENST00000485376 CECR2Q9BXF3 1484 aa37.46■■■■□ 3.59
MTMR1-209ENST00000485376 TRIM41Q8WV44 630 aa37.39■■■■□ 3.58
MTMR1-209ENST00000485376 RB1CC1Q8TDY2 1594 aa37.38■■■■□ 3.57
MTMR1-209ENST00000485376 NACADO15069 1562 aa37.31■■■■□ 3.56
MTMR1-209ENST00000485376 HRCP23327 699 aa37.25■■■■□ 3.55
MTMR1-209ENST00000485376 MROH2BQ7Z745 1585 aa37.18■■■■□ 3.54
MTMR1-209ENST00000485376 PPARGC1BQ86YN6 1023 aaKnown RBP37.04■■■■□ 3.52
MTMR1-209ENST00000485376 WIZO95785 1651 aa36.99■■■■□ 3.51
MTMR1-209ENST00000485376 PABPN1Q86U42 306 aaKnown RBP eCLIP36.76■■■■□ 3.48
MTMR1-209ENST00000485376 TRIM26Q12899 539 aaPredicted RBP36.68■■■■□ 3.46
MTMR1-209ENST00000485376 BAZ1AQ9NRL2 1556 aaPredicted RBP36.48■■■■□ 3.43
MTMR1-209ENST00000485376 UNC13AQ9UPW8 1703 aa36.36■■■■□ 3.41
MTMR1-209ENST00000485376 ABCC8Q09428 1581 aa36.26■■■■□ 3.4
MTMR1-209ENST00000485376 SMARCA4P51532 1647 aa36.25■■■■□ 3.39
MTMR1-209ENST00000485376 CCDC88BA6NC98 1476 aa36.23■■■■□ 3.39
MTMR1-209ENST00000485376 TTBK1Q5TCY1 1321 aaPredicted RBP36.2■■■■□ 3.39
MTMR1-209ENST00000485376 TOP2AP11388 1531 aaKnown RBP36.13■■■■□ 3.37
MTMR1-209ENST00000485376 EIF4G1Q04637 1599 aaKnown RBP36.03■■■■□ 3.36
MTMR1-209ENST00000485376 SMARCA2P51531 1590 aa36.02■■■■□ 3.36
MTMR1-209ENST00000485376 BICRAQ9NZM4 1560 aa35.95■■■■□ 3.35
MTMR1-209ENST00000485376 SOGA1O94964 1423 aa35.91■■■■□ 3.34
MTMR1-209ENST00000485376 RUSC2Q8N2Y8 1516 aa35.79■■■■□ 3.32
MTMR1-209ENST00000485376 UBTFP17480 764 aaKnown RBP35.77■■■■□ 3.32
MTMR1-209ENST00000485376 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.68■■■■□ 3.3
MTMR1-209ENST00000485376 CSRNP3Q8WYN3 585 aa35.63■■■■□ 3.29
MTMR1-209ENST00000485376 RANGAP1P46060 587 aaPredicted RBP35.58■■■■□ 3.29
MTMR1-209ENST00000485376 ZEB1P37275 1124 aaPredicted RBP35.55■■■■□ 3.28
MTMR1-209ENST00000485376 CEP162Q5TB80 1403 aa35.52■■■■□ 3.28
MTMR1-209ENST00000485376 WRNQ14191 1432 aaPredicted RBP eCLIP35.49■■■■□ 3.27
MTMR1-209ENST00000485376 ATAD2BQ9ULI0 1458 aa35.46■■■■□ 3.27
MTMR1-209ENST00000485376 CCER1Q8TC90 406 aaPredicted RBP35.43■■■■□ 3.26
MTMR1-209ENST00000485376 BAZ1BQ9UIG0 1483 aaKnown RBP35.42■■■■□ 3.26
MTMR1-209ENST00000485376 TNIKQ9UKE5 1360 aa35.3■■■■□ 3.24
MTMR1-209ENST00000485376 SYNJ1O43426 1573 aa35.29■■■■□ 3.24
MTMR1-209ENST00000485376 PEG3Q9GZU2 1588 aa35.27■■■■□ 3.24
MTMR1-209ENST00000485376 GOLGA3Q08378 1498 aa35.15■■■■□ 3.22
MTMR1-209ENST00000485376 EEA1Q15075 1411 aa35.14■■■■□ 3.22
MTMR1-209ENST00000485376 HNRNPUL2Q1KMD3 747 aaKnown RBP34.99■■■■□ 3.19
MTMR1-209ENST00000485376 RAPGEF2Q9Y4G8 1499 aa34.95■■■■□ 3.19
MTMR1-209ENST00000485376 CEP164Q9UPV0 1460 aa34.93■■■■□ 3.18
MTMR1-209ENST00000485376 CLIP1P30622 1438 aa34.91■■■■□ 3.18
MTMR1-209ENST00000485376 APLP2Q06481 763 aa34.79■■■■□ 3.16
MTMR1-209ENST00000485376 KIF21BO75037 1637 aa34.7■■■■□ 3.15
MTMR1-209ENST00000485376 TOP2BQ02880 1626 aa34.67■■■■□ 3.14
MTMR1-209ENST00000485376 NCAPD3P42695 1498 aa34.65■■■■□ 3.14
MTMR1-209ENST00000485376 VPS8Q8N3P4 1428 aa34.59■■■■□ 3.13
MTMR1-209ENST00000485376 CUX1P39880 1505 aa34.56■■■■□ 3.12
MTMR1-209ENST00000485376 DIEXFQ68CQ4 756 aaKnown RBP34.53■■■■□ 3.12
MTMR1-209ENST00000485376 HMGXB3Q12766 1538 aa34.49■■■■□ 3.11
MTMR1-209ENST00000485376 BIVM-ERCC5R4GMW8 1640 aa34.43■■■■□ 3.1
MTMR1-209ENST00000485376 KANK4Q5T7N3 995 aaPredicted RBP34.43■■■■□ 3.1
MTMR1-209ENST00000485376 CFTRP13569 1480 aa34.4■■■■□ 3.1
MTMR1-209ENST00000485376 SCAF1Q9H7N4 1312 aaKnown RBP34.39■■■■□ 3.1
MTMR1-209ENST00000485376 PRXQ9BXM0 1461 aa34.36■■■■□ 3.09
MTMR1-209ENST00000485376 KIF27Q86VH2 1401 aa34.35■■■■□ 3.09
MTMR1-209ENST00000485376 ITGAEP38570 1179 aa34.29■■■■□ 3.08
MTMR1-209ENST00000485376 ARAP1Q96P48 1450 aa34.26■■■■□ 3.08
MTMR1-209ENST00000485376 CUX2O14529 1486 aa34.22■■■■□ 3.07
MTMR1-209ENST00000485376 ZNF316A6NFI3 1004 aaPredicted RBP34.2■■■■□ 3.06
MTMR1-209ENST00000485376 P3H3Q8IVL6 736 aa34.2■■■■□ 3.06
MTMR1-209ENST00000485376 CADPSQ9ULU8 1353 aa34.18■■■■□ 3.06
MTMR1-209ENST00000485376 NEUROD1Q13562 356 aa34.17■■■■□ 3.06
MTMR1-209ENST00000485376 ERICH3Q5RHP9 1530 aa34.15■■■■□ 3.06
MTMR1-209ENST00000485376 ATP1B4Q9UN42 357 aaPredicted RBP34.14■■■■□ 3.06
MTMR1-209ENST00000485376 YTHDC1Q96MU7 727 aaKnown RBP34.11■■■■□ 3.05
MTMR1-209ENST00000485376 IGF1RP08069 1367 aa34.09■■■■□ 3.05
MTMR1-209ENST00000485376 CC2D2AQ9P2K1 1620 aa34.08■■■■□ 3.05
MTMR1-209ENST00000485376 FGD5Q6ZNL6 1462 aa34.04■■■■□ 3.04
MTMR1-209ENST00000485376 ARHGAP35Q9NRY4 1499 aa34.03■■■■□ 3.04
MTMR1-209ENST00000485376 ACIN1Q9UKV3 1341 aaKnown RBP33.99■■■■□ 3.03
MTMR1-209ENST00000485376 CARMIL1Q5VZK9 1371 aa33.98■■■■□ 3.03
MTMR1-209ENST00000485376 NESP48681 1621 aa33.96■■■■□ 3.03
MTMR1-209ENST00000485376 DNAJC5BQ9UF47 199 aa33.93■■■■□ 3.02
MTMR1-209ENST00000485376 RAD54L2Q9Y4B4 1467 aa33.91■■■■□ 3.02
MTMR1-209ENST00000485376 MIER1Q8N108 512 aa33.9■■■■□ 3.02
MTMR1-209ENST00000485376 FANCD2Q9BXW9 1451 aa33.89■■■■□ 3.02
MTMR1-209ENST00000485376 DHX57Q6P158 1386 aaKnown RBP33.81■■■■□ 3
MTMR1-209ENST00000485376 GTF3C3Q9Y5Q9 886 aa33.81■■■■□ 3
MTMR1-209ENST00000485376 CENPBP07199 599 aaPredicted RBP33.77■■■■□ 3
MTMR1-209ENST00000485376 PRDM2Q13029 1718 aa33.76■■■■□ 3
MTMR1-209ENST00000485376 CCNB3Q8WWL7 1395 aa33.75■■■□□ 2.99
MTMR1-209ENST00000485376 FAM50AQ14320 339 aaKnown RBP33.75■■■□□ 2.99
MTMR1-209ENST00000485376 RRBP1Q9P2E9 1410 aaKnown RBP33.66■■■□□ 2.98
MTMR1-209ENST00000485376 FHOD3Q2V2M9 1422 aa33.64■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms