RNA–Protein interactions for RNA: ENST00000484162.5

SRSF11-214, Transcript of serine and arginine rich splicing factor 11, humanhuman

TSL 1 (best)

Gene SRSF11, Length 4,008 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF11-214ENST00000484162 HSP90AA1P07900 732 aaKnown RBP8.68□□□□□ -1.02
SRSF11-214ENST00000484162 TRIM44Q96DX7 344 aaPredicted RBP8.68□□□□□ -1.02
SRSF11-214ENST00000484162 TIMELESSQ9UNS1 1208 aa8.67□□□□□ -1.02
SRSF11-214ENST00000484162 UBE2Q2Q8WVN8 375 aa8.66□□□□□ -1.02
SRSF11-214ENST00000484162 UPF2Q9HAU5 1272 aaKnown RBP8.66□□□□□ -1.02
SRSF11-214ENST00000484162 TMC1Q8TDI8 760 aa8.65□□□□□ -1.02
SRSF11-214ENST00000484162 PNNQ9H307 717 aaKnown RBP8.65□□□□□ -1.02
SRSF11-214ENST00000484162 HSP90AA2PQ14568 343 aaPredicted RBP8.65□□□□□ -1.03
SRSF11-214ENST00000484162 TNNT2P45379 298 aaPredicted RBP8.64□□□□□ -1.03
SRSF11-214ENST00000484162 ZNF326Q5BKZ1 582 aaKnown RBP8.64□□□□□ -1.03
SRSF11-214ENST00000484162 TNIKQ9UKE5 1360 aa8.63□□□□□ -1.03
SRSF11-214ENST00000484162 GSE1Q14687 1217 aa8.63□□□□□ -1.03
SRSF11-214ENST00000484162 BECN1Q14457 450 aa8.62□□□□□ -1.03
SRSF11-214ENST00000484162 CLIP1P30622 1438 aa8.61□□□□□ -1.03
SRSF11-214ENST00000484162 L1TD1Q5T7N2 865 aaKnown RBP8.61□□□□□ -1.03
SRSF11-214ENST00000484162 SIN3AQ96ST3 1273 aa8.61□□□□□ -1.03
SRSF11-214ENST00000484162 ARID4BQ4LE39 1312 aaPredicted RBP8.61□□□□□ -1.03
SRSF11-214ENST00000484162 CANXP27824 592 aaKnown RBP8.6□□□□□ -1.03
SRSF11-214ENST00000484162 EIF4G2P78344 907 aaKnown RBP eCLIP8.6□□□□□ -1.03
SRSF11-214ENST00000484162 SENP3-EIF4A1A0A087X0R7 540 aa8.59□□□□□ -1.03
SRSF11-214ENST00000484162 PAK3O75914 559 aaPredicted RBP8.59□□□□□ -1.03
SRSF11-214ENST00000484162 PODXL2Q9NZ53 605 aa8.59□□□□□ -1.03
SRSF11-214ENST00000484162 TCERG1O14776 1098 aaKnown RBP8.58□□□□□ -1.04
SRSF11-214ENST00000484162 BRPF3Q9ULD4 1205 aa8.57□□□□□ -1.04
SRSF11-214ENST00000484162 RSF1Q96T23 1441 aaPredicted RBP8.55□□□□□ -1.04
SRSF11-214ENST00000484162 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.55□□□□□ -1.04
SRSF11-214ENST00000484162 NCLP19338 710 aaKnown RBP8.54□□□□□ -1.04
SRSF11-214ENST00000484162 EEA1Q15075 1411 aa8.52□□□□□ -1.05
SRSF11-214ENST00000484162 GOLGA3Q08378 1498 aa8.52□□□□□ -1.05
SRSF11-214ENST00000484162 RGS3P49796 1198 aa8.52□□□□□ -1.05
SRSF11-214ENST00000484162 A0A0U1RQG5 324 aaPredicted RBP8.51□□□□□ -1.05
SRSF11-214ENST00000484162 WRNQ14191 1432 aaPredicted RBP eCLIP8.51□□□□□ -1.05
SRSF11-214ENST00000484162 CDK11BP21127 795 aaKnown RBP8.51□□□□□ -1.05
SRSF11-214ENST00000484162 PDE4AP27815 886 aa8.51□□□□□ -1.05
SRSF11-214ENST00000484162 DHX57Q6P158 1386 aaKnown RBP8.5□□□□□ -1.05
SRSF11-214ENST00000484162 P3H3Q8IVL6 736 aa8.49□□□□□ -1.05
SRSF11-214ENST00000484162 SLC4A3P48751 1232 aa8.48□□□□□ -1.05
SRSF11-214ENST00000484162 GOLGA6L3A6NEY3 463 aa8.48□□□□□ -1.05
SRSF11-214ENST00000484162 GZF1Q9H116 711 aaPredicted RBP8.48□□□□□ -1.05
SRSF11-214ENST00000484162 NFKBIBQ15653 356 aa8.48□□□□□ -1.05
SRSF11-214ENST00000484162 PPP1R15AO75807 674 aaPredicted RBP8.47□□□□□ -1.05
SRSF11-214ENST00000484162 MSNP26038 577 aaKnown RBP8.47□□□□□ -1.05
SRSF11-214ENST00000484162 FAM43AQ8N2R8 423 aa8.47□□□□□ -1.05
SRSF11-214ENST00000484162 FRAT1Q92837 279 aaPredicted RBP8.47□□□□□ -1.05
SRSF11-214ENST00000484162 GOLGA6L22H0YM25 854 aa8.47□□□□□ -1.05
SRSF11-214ENST00000484162 DNTTIP2Q5QJE6 756 aaKnown RBP8.47□□□□□ -1.05
SRSF11-214ENST00000484162 SLKQ9H2G2 1235 aaPredicted RBP8.47□□□□□ -1.05
SRSF11-214ENST00000484162 NUDCQ9Y266 331 aa8.47□□□□□ -1.05
SRSF11-214ENST00000484162 MYH16Q9H6N6 1097 aa8.46□□□□□ -1.05
SRSF11-214ENST00000484162 CCNB3Q8WWL7 1395 aa8.46□□□□□ -1.06
SRSF11-214ENST00000484162 ARID3AQ99856 593 aa8.46□□□□□ -1.06
SRSF11-214ENST00000484162 ZMYND15Q9H091 742 aa8.45□□□□□ -1.06
SRSF11-214ENST00000484162 SLC4A1APQ9BWU0 796 aaKnown RBP8.44□□□□□ -1.06
SRSF11-214ENST00000484162 AMER1Q5JTC6 1135 aaPredicted RBP8.44□□□□□ -1.06
SRSF11-214ENST00000484162 PTMAP06454 111 aaKnown RBP8.43□□□□□ -1.06
SRSF11-214ENST00000484162 RCAN3Q9UKA8 241 aa8.43□□□□□ -1.06
SRSF11-214ENST00000484162 ZBED9Q6R2W3 1325 aa8.43□□□□□ -1.06
SRSF11-214ENST00000484162 VPS8Q8N3P4 1428 aa8.42□□□□□ -1.06
SRSF11-214ENST00000484162 MS4A1P11836 297 aa8.42□□□□□ -1.06
SRSF11-214ENST00000484162 RRP9O43818 475 aaKnown RBP8.42□□□□□ -1.06
SRSF11-214ENST00000484162 HSPA5P11021 654 aaKnown RBP8.42□□□□□ -1.06
SRSF11-214ENST00000484162 SLC24A1O60721 1099 aa8.42□□□□□ -1.06
SRSF11-214ENST00000484162 SOGA1O94964 1423 aa8.41□□□□□ -1.06
SRSF11-214ENST00000484162 CHIC2Q9UKJ5 165 aa8.41□□□□□ -1.06
SRSF11-214ENST00000484162 RAB3GAP2Q9H2M9 1393 aa8.41□□□□□ -1.06
SRSF11-214ENST00000484162 SPRYD3Q8NCJ5 442 aa8.41□□□□□ -1.06
SRSF11-214ENST00000484162 WDR43Q15061 677 aaKnown RBP eCLIP8.4□□□□□ -1.062e-18■□□□□ 10.1
SRSF11-214ENST00000484162 KANK4Q5T7N3 995 aaPredicted RBP8.4□□□□□ -1.06
SRSF11-214ENST00000484162 CEP164Q9UPV0 1460 aa8.4□□□□□ -1.06
SRSF11-214ENST00000484162 BAZ1BQ9UIG0 1483 aaKnown RBP8.39□□□□□ -1.07
SRSF11-214ENST00000484162 SETD5Q9C0A6 1442 aa8.39□□□□□ -1.07
SRSF11-214ENST00000484162 RB1CC1Q8TDY2 1594 aa8.38□□□□□ -1.07
SRSF11-214ENST00000484162 EXOC6Q8TAG9 804 aa8.38□□□□□ -1.07
SRSF11-214ENST00000484162 FRAT2O75474 233 aaPredicted RBP8.37□□□□□ -1.07
SRSF11-214ENST00000484162 PRKRIP1Q9H875 184 aaPredicted RBP8.37□□□□□ -1.07
SRSF11-214ENST00000484162 FAM13BQ9NYF5 915 aa8.37□□□□□ -1.07
SRSF11-214ENST00000484162 C11orf95C9JLR9 678 aaPredicted RBP8.36□□□□□ -1.07
SRSF11-214ENST00000484162 FAM161AQ3B820 660 aa8.36□□□□□ -1.07
SRSF11-214ENST00000484162 RRP7BPQ9NSQ0 103 aa8.36□□□□□ -1.07
SRSF11-214ENST00000484162 HSCBQ8IWL3 235 aa8.35□□□□□ -1.07
SRSF11-214ENST00000484162 HSP90AB1P08238 724 aaKnown RBP8.34□□□□□ -1.07
SRSF11-214ENST00000484162 RRP1P56182 461 aaKnown RBP8.34□□□□□ -1.07
SRSF11-214ENST00000484162 BACH2Q9BYV9 841 aa8.34□□□□□ -1.07
SRSF11-214ENST00000484162 GBP4Q96PP9 640 aa8.33□□□□□ -1.08
SRSF11-214ENST00000484162 MAP7D2Q96T17 732 aa8.32□□□□□ -1.08
SRSF11-214ENST00000484162 KDM2AQ9Y2K7 1162 aa8.32□□□□□ -1.08
SRSF11-214ENST00000484162 TPM2P07951 284 aa8.32□□□□□ -1.08
SRSF11-214ENST00000484162 SCRIBQ14160 1630 aa8.31□□□□□ -1.08
SRSF11-214ENST00000484162 CCDC88BA6NC98 1476 aa8.31□□□□□ -1.08
SRSF11-214ENST00000484162 CHAF1AQ13111 956 aaPredicted RBP8.31□□□□□ -1.08
SRSF11-214ENST00000484162 ZBTB7CA1YPR0 619 aa8.31□□□□□ -1.08
SRSF11-214ENST00000484162 PDE3BQ13370 1112 aa8.31□□□□□ -1.08
SRSF11-214ENST00000484162 MTUS2Q5JR59 1369 aa8.3□□□□□ -1.08
SRSF11-214ENST00000484162 WASHC2AQ641Q2 1341 aa8.3□□□□□ -1.08
SRSF11-214ENST00000484162 MRE11P49959 708 aa8.3□□□□□ -1.08
SRSF11-214ENST00000484162 CENPQQ7L2Z9 268 aaPredicted RBP8.3□□□□□ -1.08
SRSF11-214ENST00000484162 PTMSP20962 102 aa8.29□□□□□ -1.08
SRSF11-214ENST00000484162 PLIN1O60240 522 aa8.29□□□□□ -1.08
SRSF11-214ENST00000484162 PLCB2Q00722 1185 aa8.29□□□□□ -1.08
SRSF11-214ENST00000484162 DDX11L8A8MPP1 907 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms