RNA–Protein interactions for RNA: ENST00000483235.5

STAG1-207, Transcript of stromal antigen 1, humanhuman

TSL 1 (best)

Gene STAG1, Length 5,206 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1-207ENST00000483235 CLSPNQ9HAW4 1339 aa13.9□□□□□ -0.18
STAG1-207ENST00000483235 SMARCA4P51532 1647 aa13.89□□□□□ -0.19
STAG1-207ENST00000483235 CCNB3Q8WWL7 1395 aa13.88□□□□□ -0.19
STAG1-207ENST00000483235 FMN1Q68DA7 1419 aa13.86□□□□□ -0.19
STAG1-207ENST00000483235 CDCA8Q53HL2 280 aa13.85□□□□□ -0.19
STAG1-207ENST00000483235 NCAPD3P42695 1498 aa13.85□□□□□ -0.19
STAG1-207ENST00000483235 PPP1R15AO75807 674 aaPredicted RBP13.82□□□□□ -0.2
STAG1-207ENST00000483235 HDGFP51858 240 aaKnown RBP13.81□□□□□ -0.2
STAG1-207ENST00000483235 RRP7BPQ9NSQ0 103 aa13.81□□□□□ -0.2
STAG1-207ENST00000483235 TDRD9Q8NDG6 1382 aaKnown RBP13.81□□□□□ -0.2
STAG1-207ENST00000483235 TIMELESSQ9UNS1 1208 aa13.8□□□□□ -0.2
STAG1-207ENST00000483235 EIF4G2P78344 907 aaKnown RBP eCLIP13.8□□□□□ -0.2
STAG1-207ENST00000483235 RSPH4AQ5TD94 716 aa13.8□□□□□ -0.2
STAG1-207ENST00000483235 CANXP27824 592 aaKnown RBP13.79□□□□□ -0.2
STAG1-207ENST00000483235 KANK1Q14678 1352 aa13.79□□□□□ -0.2
STAG1-207ENST00000483235 EIF4G1Q04637 1599 aaKnown RBP13.79□□□□□ -0.2
STAG1-207ENST00000483235 ARID4BQ4LE39 1312 aaPredicted RBP13.78□□□□□ -0.2
STAG1-207ENST00000483235 EFCAB2Q5VUJ9 269 aa13.77□□□□□ -0.2
STAG1-207ENST00000483235 FANCD2Q9BXW9 1451 aa13.77□□□□□ -0.2
STAG1-207ENST00000483235 VPS8Q8N3P4 1428 aa13.77□□□□□ -0.21
STAG1-207ENST00000483235 MYT1Q01538 1121 aa13.77□□□□□ -0.21
STAG1-207ENST00000483235 RAPGEF2Q9Y4G8 1499 aa13.77□□□□□ -0.21
STAG1-207ENST00000483235 WIZO95785 1651 aa13.76□□□□□ -0.21
STAG1-207ENST00000483235 KDM2AQ9Y2K7 1162 aa13.73□□□□□ -0.21
STAG1-207ENST00000483235 TMC1Q8TDI8 760 aa13.71□□□□□ -0.21
STAG1-207ENST00000483235 PLPPR3Q6T4P5 718 aa13.7□□□□□ -0.22
STAG1-207ENST00000483235 JPH4Q96JJ6 628 aa13.7□□□□□ -0.22
STAG1-207ENST00000483235 ARHGAP35Q9NRY4 1499 aa13.68□□□□□ -0.22
STAG1-207ENST00000483235 WDR43Q15061 677 aaKnown RBP eCLIP13.67□□□□□ -0.22
STAG1-207ENST00000483235 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.67□□□□□ -0.22
STAG1-207ENST00000483235 TRHP20396 242 aaPredicted RBP13.65□□□□□ -0.22
STAG1-207ENST00000483235 DDX10Q13206 875 aaKnown RBP13.65□□□□□ -0.22
STAG1-207ENST00000483235 OSCARQ8IYS5 282 aa13.64□□□□□ -0.23
STAG1-207ENST00000483235 CFAP53Q96M91 514 aa13.63□□□□□ -0.23
STAG1-207ENST00000483235 C14orf37Q86TY3 774 aa13.63□□□□□ -0.23
STAG1-207ENST00000483235 CCDC18Q5T9S5 1454 aa13.62□□□□□ -0.23
STAG1-207ENST00000483235 ANKRD30AQ9BXX3 1397 aa13.62□□□□□ -0.23
STAG1-207ENST00000483235 RGL3Q3MIN7 710 aa13.61□□□□□ -0.23
STAG1-207ENST00000483235 CARD11Q9BXL7 1154 aa13.59□□□□□ -0.23
STAG1-207ENST00000483235 PTPRGP23470 1445 aa13.58□□□□□ -0.24
STAG1-207ENST00000483235 RTL5Q5HYW3 569 aaPredicted RBP13.57□□□□□ -0.24
STAG1-207ENST00000483235 HMGXB3Q12766 1538 aa13.57□□□□□ -0.24
STAG1-207ENST00000483235 GAPVD1Q14C86 1478 aa13.57□□□□□ -0.24
STAG1-207ENST00000483235 NPM2Q86SE8 214 aaKnown RBP13.57□□□□□ -0.24
STAG1-207ENST00000483235 MRS2Q9HD23 443 aa13.57□□□□□ -0.24
STAG1-207ENST00000483235 KNSTRNQ9Y448 316 aa13.57□□□□□ -0.24
STAG1-207ENST00000483235 POGKQ9P215 609 aa13.57□□□□□ -0.24
STAG1-207ENST00000483235 SETD5Q9C0A6 1442 aa13.57□□□□□ -0.24
STAG1-207ENST00000483235 HNRNPUQ00839 825 aaKnown RBP eCLIP13.56□□□□□ -0.24
STAG1-207ENST00000483235 CFTRP13569 1480 aa13.54□□□□□ -0.24
STAG1-207ENST00000483235 FAM9BQ8IZU0 186 aa13.53□□□□□ -0.24
STAG1-207ENST00000483235 NUDCQ9Y266 331 aa13.53□□□□□ -0.24
STAG1-207ENST00000483235 FGD5Q6ZNL6 1462 aa13.52□□□□□ -0.24
STAG1-207ENST00000483235 PNNQ9H307 717 aaKnown RBP13.52□□□□□ -0.25
STAG1-207ENST00000483235 SPAG9O60271 1321 aaKnown RBP13.51□□□□□ -0.25
STAG1-207ENST00000483235 IGF1RP08069 1367 aa13.51□□□□□ -0.25
STAG1-207ENST00000483235 TMF1P82094 1093 aa13.5□□□□□ -0.25
STAG1-207ENST00000483235 GGT6Q6P531 493 aa13.49□□□□□ -0.25
STAG1-207ENST00000483235 HAP1P54257 671 aaPredicted RBP13.48□□□□□ -0.25
STAG1-207ENST00000483235 GRIN2BQ13224 1484 aa13.48□□□□□ -0.25
STAG1-207ENST00000483235 FHOD3Q2V2M9 1422 aa13.47□□□□□ -0.25
STAG1-207ENST00000483235 UPF2Q9HAU5 1272 aaKnown RBP13.47□□□□□ -0.25
STAG1-207ENST00000483235 SCAF1Q9H7N4 1312 aaKnown RBP13.46□□□□□ -0.25
STAG1-207ENST00000483235 PKD2Q13563 968 aa13.46□□□□□ -0.26
STAG1-207ENST00000483235 NUP155O75694 1391 aa13.45□□□□□ -0.26
STAG1-207ENST00000483235 MRC2Q9UBG0 1479 aa13.45□□□□□ -0.26
STAG1-207ENST00000483235 GTF3C3Q9Y5Q9 886 aa13.45□□□□□ -0.26
STAG1-207ENST00000483235 IFT140Q96RY7 1462 aa13.45□□□□□ -0.26
STAG1-207ENST00000483235 DCAF11Q8TEB1 546 aa13.45□□□□□ -0.26
STAG1-207ENST00000483235 KANK4Q5T7N3 995 aaPredicted RBP13.44□□□□□ -0.26
STAG1-207ENST00000483235 EIF5BO60841 1220 aaKnown RBP13.43□□□□□ -0.26
STAG1-207ENST00000483235 MYH16Q9H6N6 1097 aa13.43□□□□□ -0.26
STAG1-207ENST00000483235 KIF3BO15066 747 aa13.42□□□□□ -0.26
STAG1-207ENST00000483235 CHMP4BQ9H444 224 aaKnown RBP13.42□□□□□ -0.26
STAG1-207ENST00000483235 MLECQ14165 292 aa13.42□□□□□ -0.26
STAG1-207ENST00000483235 STAC3Q96MF2 364 aa13.41□□□□□ -0.26
STAG1-207ENST00000483235 ANP32AP39687 249 aaKnown RBP13.41□□□□□ -0.26
STAG1-207ENST00000483235 MPHOSPH9Q99550 1183 aa13.41□□□□□ -0.26
STAG1-207ENST00000483235 EID1Q9Y6B2 187 aa13.41□□□□□ -0.26
STAG1-207ENST00000483235 MAPK8IP3Q9UPT6 1336 aa13.39□□□□□ -0.27
STAG1-207ENST00000483235 CC2D2AQ9P2K1 1620 aa13.39□□□□□ -0.27
STAG1-207ENST00000483235 EIF3AQ14152 1382 aaKnown RBP13.38□□□□□ -0.27
STAG1-207ENST00000483235 WASHC2CQ9Y4E1 1318 aa13.38□□□□□ -0.27
STAG1-207ENST00000483235 MS4A1P11836 297 aa13.37□□□□□ -0.27
STAG1-207ENST00000483235 SIN3AQ96ST3 1273 aa13.37□□□□□ -0.27
STAG1-207ENST00000483235 CHMP4AQ9BY43 222 aa13.37□□□□□ -0.27
STAG1-207ENST00000483235 UACAQ9BZF9 1416 aa13.37□□□□□ -0.27
STAG1-207ENST00000483235 HDGFL2Q7Z4V5 671 aaPredicted RBP13.36□□□□□ -0.27
STAG1-207ENST00000483235 RAD54L2Q9Y4B4 1467 aa13.36□□□□□ -0.27
STAG1-207ENST00000483235 CYB5RLQ6IPT4 315 aa13.36□□□□□ -0.27
STAG1-207ENST00000483235 HNRNPMP52272 730 aaKnown RBP eCLIP13.36□□□□□ -0.271e-6■■■■■ 27.3
STAG1-207ENST00000483235 CCDC136Q96JN2 1154 aa13.35□□□□□ -0.27
STAG1-207ENST00000483235 MYOM3Q5VTT5 1437 aa13.34□□□□□ -0.27
STAG1-207ENST00000483235 RAB3GAP2Q9H2M9 1393 aa13.34□□□□□ -0.27
STAG1-207ENST00000483235 ERICH3Q5RHP9 1530 aa13.34□□□□□ -0.27
STAG1-207ENST00000483235 SRPK2P78362 688 aaKnown RBP13.33□□□□□ -0.28
STAG1-207ENST00000483235 SALL2Q9Y467 1007 aaPredicted RBP13.33□□□□□ -0.28
STAG1-207ENST00000483235 AQRO60306 1485 aaKnown RBP eCLIP13.31□□□□□ -0.28
STAG1-207ENST00000483235 ZBTB7CA1YPR0 619 aa13.31□□□□□ -0.28
STAG1-207ENST00000483235 FKBP8Q14318 412 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms