RNA–Protein interactions for RNA: ENST00000483235.5

STAG1-207, Transcript of stromal antigen 1, humanhuman

TSL 1 (best)

Gene STAG1, Length 5,206 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1-207ENST00000483235 NISCHQ9Y2I1 1504 aa18.4■□□□□ 0.54
STAG1-207ENST00000483235 DCAF8L2P0C7V8 631 aa18.02■□□□□ 0.47
STAG1-207ENST00000483235 SUPT5HO00267 1087 aaKnown RBP16.84■□□□□ 0.29
STAG1-207ENST00000483235 SHROOM4Q9ULL8 1493 aa16.65■□□□□ 0.26
STAG1-207ENST00000483235 FAM9AQ8IZU1 332 aaPredicted RBP16.34■□□□□ 0.21
STAG1-207ENST00000483235 APLP2Q06481 763 aa16.15■□□□□ 0.18
STAG1-207ENST00000483235 TRIM41Q8WV44 630 aa15.88■□□□□ 0.13
STAG1-207ENST00000483235 EHMT2Q96KQ7 1210 aa15.74■□□□□ 0.11
STAG1-207ENST00000483235 ABCC9O60706 1549 aa15.73■□□□□ 0.11
STAG1-207ENST00000483235 UBTFP17480 764 aaKnown RBP15.6■□□□□ 0.09
STAG1-207ENST00000483235 ATP1B4Q9UN42 357 aaPredicted RBP15.43■□□□□ 0.06
STAG1-207ENST00000483235 CCDC180Q9P1Z9 1646 aa15.42■□□□□ 0.06
STAG1-207ENST00000483235 ZEB1P37275 1124 aaPredicted RBP15.42■□□□□ 0.06
STAG1-207ENST00000483235 PABPN1Q86U42 306 aaKnown RBP eCLIP15.38■□□□□ 0.05
STAG1-207ENST00000483235 RANGAP1P46060 587 aaPredicted RBP15.36■□□□□ 0.05
STAG1-207ENST00000483235 PELP1Q8IZL8 1130 aaKnown RBP15.34■□□□□ 0.05
STAG1-207ENST00000483235 ZCCHC6Q5VYS8 1495 aaKnown RBP15.23■□□□□ 0.03
STAG1-207ENST00000483235 PCGF6Q9BYE7 350 aa15.21■□□□□ 0.03
STAG1-207ENST00000483235 CHIC1Q5VXU3 224 aa15.2■□□□□ 0.02
STAG1-207ENST00000483235 TTBK1Q5TCY1 1321 aaPredicted RBP15.18■□□□□ 0.02
STAG1-207ENST00000483235 CCER1Q8TC90 406 aaPredicted RBP15.16■□□□□ 0.02
STAG1-207ENST00000483235 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.12■□□□□ 0.01
STAG1-207ENST00000483235 HNRNPUL2Q1KMD3 747 aaKnown RBP15.12■□□□□ 0.01
STAG1-207ENST00000483235 RB1CC1Q8TDY2 1594 aa15.08■□□□□ 0
STAG1-207ENST00000483235 SCRIBQ14160 1630 aa15.04■□□□□ -0
STAG1-207ENST00000483235 TRIM26Q12899 539 aaPredicted RBP15.03■□□□□ -0
STAG1-207ENST00000483235 NACADO15069 1562 aa15.02■□□□□ -0
STAG1-207ENST00000483235 MYT1LQ9UL68 1186 aa14.98□□□□□ -0.01
STAG1-207ENST00000483235 CENPBP07199 599 aaPredicted RBP14.9□□□□□ -0.02
STAG1-207ENST00000483235 DCAF1Q9Y4B6 1507 aa14.87□□□□□ -0.03
STAG1-207ENST00000483235 CSRNP3Q8WYN3 585 aa14.83□□□□□ -0.04
STAG1-207ENST00000483235 LOC105371045A0A1W2PR82 267 aa14.82□□□□□ -0.04
STAG1-207ENST00000483235 FBLN2P98095 1184 aa14.76□□□□□ -0.05
STAG1-207ENST00000483235 CDK11AQ9UQ88 783 aaPredicted RBP14.76□□□□□ -0.05
STAG1-207ENST00000483235 ITGAEP38570 1179 aa14.76□□□□□ -0.05
STAG1-207ENST00000483235 PPARGC1BQ86YN6 1023 aaKnown RBP14.7□□□□□ -0.06
STAG1-207ENST00000483235 NEFLP07196 543 aa14.65□□□□□ -0.06
STAG1-207ENST00000483235 FAM50AQ14320 339 aaKnown RBP14.64□□□□□ -0.07
STAG1-207ENST00000483235 MYO15BQ96JP2 1530 aa14.62□□□□□ -0.07
STAG1-207ENST00000483235 NPM1P06748 294 aaKnown RBP eCLIP14.59□□□□□ -0.07
STAG1-207ENST00000483235 EEA1Q15075 1411 aa14.57□□□□□ -0.08
STAG1-207ENST00000483235 BAZ1AQ9NRL2 1556 aaPredicted RBP14.55□□□□□ -0.08
STAG1-207ENST00000483235 BAZ1BQ9UIG0 1483 aaKnown RBP14.55□□□□□ -0.08
STAG1-207ENST00000483235 TRIM52Q96A61 297 aa14.55□□□□□ -0.08
STAG1-207ENST00000483235 RSF1Q96T23 1441 aaPredicted RBP14.54□□□□□ -0.08
STAG1-207ENST00000483235 HRCP23327 699 aa14.48□□□□□ -0.09
STAG1-207ENST00000483235 ACIN1Q9UKV3 1341 aaKnown RBP14.46□□□□□ -0.1
STAG1-207ENST00000483235 CHMP7Q8WUX9 453 aaPredicted RBP14.46□□□□□ -0.1
STAG1-207ENST00000483235 POLR3GLQ9BT43 218 aa14.43□□□□□ -0.1
STAG1-207ENST00000483235 P3H3Q8IVL6 736 aa14.41□□□□□ -0.1
STAG1-207ENST00000483235 ESF1Q9H501 851 aaKnown RBP14.38□□□□□ -0.11
STAG1-207ENST00000483235 WRNQ14191 1432 aaPredicted RBP eCLIP14.37□□□□□ -0.11
STAG1-207ENST00000483235 KIF27Q86VH2 1401 aa14.35□□□□□ -0.11
STAG1-207ENST00000483235 ERICH6Q7L0X2 663 aa14.34□□□□□ -0.11
STAG1-207ENST00000483235 SMARCA2P51531 1590 aa14.33□□□□□ -0.12
STAG1-207ENST00000483235 SLC4A1APQ9BWU0 796 aaKnown RBP14.3□□□□□ -0.12
STAG1-207ENST00000483235 ZNF777Q9ULD5 760 aaPredicted RBP14.3□□□□□ -0.12
STAG1-207ENST00000483235 ERCC6Q03468 1493 aa14.29□□□□□ -0.12
STAG1-207ENST00000483235 TSPY4P0CV99 314 aa14.28□□□□□ -0.12
STAG1-207ENST00000483235 TSPY10P0CW01 314 aa14.28□□□□□ -0.12
STAG1-207ENST00000483235 NEUROD1Q13562 356 aa14.26□□□□□ -0.13
STAG1-207ENST00000483235 MTUS2Q5JR59 1369 aa14.25□□□□□ -0.13
STAG1-207ENST00000483235 PDS5BQ9NTI5 1447 aa14.25□□□□□ -0.13
STAG1-207ENST00000483235 GOLGA3Q08378 1498 aa14.25□□□□□ -0.13
STAG1-207ENST00000483235 CLIP1P30622 1438 aa14.24□□□□□ -0.13
STAG1-207ENST00000483235 YTHDC1Q96MU7 727 aaKnown RBP14.23□□□□□ -0.13
STAG1-207ENST00000483235 PLEKHD1A6NEE1 506 aa14.23□□□□□ -0.13
STAG1-207ENST00000483235 ARID3CA6NKF2 412 aa14.22□□□□□ -0.13
STAG1-207ENST00000483235 CECR2Q9BXF3 1484 aa14.21□□□□□ -0.13
STAG1-207ENST00000483235 CEP164Q9UPV0 1460 aa14.2□□□□□ -0.14
STAG1-207ENST00000483235 ANP32CO43423 234 aa14.16□□□□□ -0.14
STAG1-207ENST00000483235 ZNF326Q5BKZ1 582 aaKnown RBP14.16□□□□□ -0.14
STAG1-207ENST00000483235 BCANQ96GW7 911 aa14.16□□□□□ -0.14
STAG1-207ENST00000483235 DIEXFQ68CQ4 756 aaKnown RBP14.16□□□□□ -0.14
STAG1-207ENST00000483235 NEFMP07197 916 aa14.15□□□□□ -0.14
STAG1-207ENST00000483235 TNIKQ9UKE5 1360 aa14.15□□□□□ -0.14
STAG1-207ENST00000483235 STAG3Q9UJ98 1225 aa14.14□□□□□ -0.15
STAG1-207ENST00000483235 TONSLQ96HA7 1378 aa14.11□□□□□ -0.15
STAG1-207ENST00000483235 DAXXQ9UER7 740 aaPredicted RBP14.08□□□□□ -0.15
STAG1-207ENST00000483235 FHAD1B1AJZ9 1412 aa14.08□□□□□ -0.16
STAG1-207ENST00000483235 MROH2BQ7Z745 1585 aa14.07□□□□□ -0.16
STAG1-207ENST00000483235 ZNF316A6NFI3 1004 aaPredicted RBP14.07□□□□□ -0.16
STAG1-207ENST00000483235 CADPSQ9ULU8 1353 aa14.07□□□□□ -0.16
STAG1-207ENST00000483235 CARMIL1Q5VZK9 1371 aa14.06□□□□□ -0.16
STAG1-207ENST00000483235 CEP162Q5TB80 1403 aa14.03□□□□□ -0.16
STAG1-207ENST00000483235 CCDC88BA6NC98 1476 aa14.03□□□□□ -0.16
STAG1-207ENST00000483235 CNGB1Q14028 1251 aaPredicted RBP14.03□□□□□ -0.16
STAG1-207ENST00000483235 CUX2O14529 1486 aa14.02□□□□□ -0.16
STAG1-207ENST00000483235 TOP2AP11388 1531 aaKnown RBP14.02□□□□□ -0.16
STAG1-207ENST00000483235 CHGAP10645 457 aaKnown RBP14.01□□□□□ -0.17
STAG1-207ENST00000483235 ABCC8Q09428 1581 aa14.01□□□□□ -0.17
STAG1-207ENST00000483235 ATAD2BQ9ULI0 1458 aa14□□□□□ -0.17
STAG1-207ENST00000483235 CARMIL2Q6F5E8 1435 aa14□□□□□ -0.17
STAG1-207ENST00000483235 CFDP1Q9UEE9 299 aaPredicted RBP14□□□□□ -0.17
STAG1-207ENST00000483235 SOGA1O94964 1423 aa13.97□□□□□ -0.17
STAG1-207ENST00000483235 KCNH8Q96L42 1107 aa13.97□□□□□ -0.17
STAG1-207ENST00000483235 CHIC2Q9UKJ5 165 aa13.95□□□□□ -0.18
STAG1-207ENST00000483235 ZBTB47Q9UFB7 747 aaPredicted RBP13.95□□□□□ -0.18
STAG1-207ENST00000483235 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.94□□□□□ -0.182e-6■■■□□ 16.6
STAG1-207ENST00000483235 SLC24A1O60721 1099 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms