RNA–Protein interactions for RNA: ENST00000482889.1

CLCC1-209, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 752 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-209ENST00000482889 ZRANB1Q9UGI0 708 aa8.64□□□□□ -1.03
CLCC1-209ENST00000482889 POTEIP0CG38 1075 aa8.63□□□□□ -1.03
CLCC1-209ENST00000482889 RASEFQ8IZ41 740 aa8.63□□□□□ -1.03
CLCC1-209ENST00000482889 ZNF579Q8NAF0 562 aaKnown RBP8.63□□□□□ -1.03
CLCC1-209ENST00000482889 SPOCK2Q92563 424 aa8.63□□□□□ -1.03
CLCC1-209ENST00000482889 CLCN6P51797 869 aa8.62□□□□□ -1.03
CLCC1-209ENST00000482889 FAM212AQ96EL1 285 aa8.61□□□□□ -1.03
CLCC1-209ENST00000482889 TSPYL2Q9H2G4 693 aaPredicted RBP8.59□□□□□ -1.03
CLCC1-209ENST00000482889 CCDC61Q9Y6R9 512 aa8.59□□□□□ -1.03
CLCC1-209ENST00000482889 GSE1Q14687 1217 aa8.56□□□□□ -1.04
CLCC1-209ENST00000482889 DCAF8Q5TAQ9 597 aa8.54□□□□□ -1.04
CLCC1-209ENST00000482889 PLCB2Q00722 1185 aa8.53□□□□□ -1.04
CLCC1-209ENST00000482889 PKD2Q13563 968 aa8.52□□□□□ -1.05
CLCC1-209ENST00000482889 PHF12Q96QT6 1004 aa8.52□□□□□ -1.05
CLCC1-209ENST00000482889 KIF12Q96FN5 646 aa8.5□□□□□ -1.05
CLCC1-209ENST00000482889 SGIP1Q9BQI5 828 aa8.49□□□□□ -1.05
CLCC1-209ENST00000482889 CHRM1P11229 460 aaPredicted RBP8.48□□□□□ -1.05
CLCC1-209ENST00000482889 TRIM41Q8WV44 630 aa8.48□□□□□ -1.05
CLCC1-209ENST00000482889 CIZ1Q9ULV3 898 aaPredicted RBP8.47□□□□□ -1.05
CLCC1-209ENST00000482889 DCBLD2Q96PD2 775 aa8.46□□□□□ -1.06
CLCC1-209ENST00000482889 MAP3K13O43283 966 aa8.45□□□□□ -1.06
CLCC1-209ENST00000482889 MS4A3Q96HJ5 214 aa8.45□□□□□ -1.06
CLCC1-209ENST00000482889 GALR2O43603 387 aaPredicted RBP8.44□□□□□ -1.06
CLCC1-209ENST00000482889 PYGBP11216 843 aa8.43□□□□□ -1.06
CLCC1-209ENST00000482889 DCAF8L2P0C7V8 631 aa8.42□□□□□ -1.06
CLCC1-209ENST00000482889 HAP1P54257 671 aaPredicted RBP8.42□□□□□ -1.06
CLCC1-209ENST00000482889 PCDHB13Q9Y5F0 798 aa8.42□□□□□ -1.06
CLCC1-209ENST00000482889 ZNF467Q7Z7K2 595 aaPredicted RBP8.38□□□□□ -1.07
CLCC1-209ENST00000482889 IFNL1Q8IU54 200 aa8.38□□□□□ -1.07
CLCC1-209ENST00000482889 POTEB2H3BUK9 544 aa8.36□□□□□ -1.07
CLCC1-209ENST00000482889 TIE1P35590 1138 aa8.36□□□□□ -1.07
CLCC1-209ENST00000482889 OTUD5Q96G74 571 aa8.36□□□□□ -1.07
CLCC1-209ENST00000482889 PRKCSHP14314 528 aaPredicted RBP8.34□□□□□ -1.07
CLCC1-209ENST00000482889 ASTLQ6HA08 431 aaPredicted RBP8.34□□□□□ -1.07
CLCC1-209ENST00000482889 POTEMA6NI47 508 aa8.33□□□□□ -1.08
CLCC1-209ENST00000482889 PCDHB8Q9UN66 801 aa8.33□□□□□ -1.08
CLCC1-209ENST00000482889 TRPC6Q9Y210 931 aa8.33□□□□□ -1.08
CLCC1-209ENST00000482889 ATMINO43313 823 aaPredicted RBP8.32□□□□□ -1.08
CLCC1-209ENST00000482889 ECM2O94769 699 aaPredicted RBP8.32□□□□□ -1.08
CLCC1-209ENST00000482889 KDM2AQ9Y2K7 1162 aa8.32□□□□□ -1.08
CLCC1-209ENST00000482889 BMP2KQ9NSY1 1161 aaPredicted RBP8.31□□□□□ -1.08
CLCC1-209ENST00000482889 POTEGQ6S5H5 508 aa8.3□□□□□ -1.08
CLCC1-209ENST00000482889 RNF25Q96BH1 459 aaPredicted RBP8.3□□□□□ -1.08
CLCC1-209ENST00000482889 TTLL13PA6NNM8 815 aa8.29□□□□□ -1.08
CLCC1-209ENST00000482889 RIOK3O14730 519 aaKnown RBP8.29□□□□□ -1.08
CLCC1-209ENST00000482889 PDAP1Q13442 181 aaKnown RBP8.29□□□□□ -1.08
CLCC1-209ENST00000482889 RGL2O15211 777 aa8.28□□□□□ -1.08
CLCC1-209ENST00000482889 ATN1P54259 1190 aaPredicted RBP8.27□□□□□ -1.09
CLCC1-209ENST00000482889 TMEM106CQ9BVX2 250 aa8.27□□□□□ -1.09
CLCC1-209ENST00000482889 TAOK2Q9UL54 1235 aa8.27□□□□□ -1.09
CLCC1-209ENST00000482889 VGFO15240 615 aaPredicted RBP8.26□□□□□ -1.09
CLCC1-209ENST00000482889 PSEN1P49768 467 aa8.26□□□□□ -1.09
CLCC1-209ENST00000482889 PELP1Q8IZL8 1130 aaKnown RBP8.26□□□□□ -1.09
CLCC1-209ENST00000482889 VSIG10Q8N0Z9 540 aa8.26□□□□□ -1.09
CLCC1-209ENST00000482889 PCDH10Q9P2E7 1040 aa8.25□□□□□ -1.09
CLCC1-209ENST00000482889 BBXQ8WY36 941 aaPredicted RBP8.24□□□□□ -1.09
CLCC1-209ENST00000482889 SLC39A7Q92504 469 aa8.24□□□□□ -1.09
CLCC1-209ENST00000482889 PAXIP1Q6ZW49 1069 aaPredicted RBP8.23□□□□□ -1.09
CLCC1-209ENST00000482889 TRIM35Q9UPQ4 493 aa8.23□□□□□ -1.09
CLCC1-209ENST00000482889 C7P10643 843 aa8.22□□□□□ -1.09
CLCC1-209ENST00000482889 IER5LQ5T953 404 aa8.22□□□□□ -1.09
CLCC1-209ENST00000482889 CFAP44Q96MT7 982 aa8.21□□□□□ -1.1
CLCC1-209ENST00000482889 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.2□□□□□ -1.1
CLCC1-209ENST00000482889 BCANQ96GW7 911 aa8.2□□□□□ -1.1
CLCC1-209ENST00000482889 ZFP91Q96JP5 570 aaPredicted RBP8.2□□□□□ -1.1
CLCC1-209ENST00000482889 TSHZ2Q9NRE2 1034 aa8.19□□□□□ -1.1
CLCC1-209ENST00000482889 METRNQ9UJH8 293 aa8.19□□□□□ -1.1
CLCC1-209ENST00000482889 POTEJP0CG39 1038 aa8.17□□□□□ -1.1
CLCC1-209ENST00000482889 GOLGA2Q08379 1002 aa8.16□□□□□ -1.1
CLCC1-209ENST00000482889 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.16□□□□□ -1.1
CLCC1-209ENST00000482889 CABP2Q9NPB3 220 aa8.15□□□□□ -1.1
CLCC1-209ENST00000482889 IRX5P78411 483 aaPredicted RBP8.14□□□□□ -1.11
CLCC1-209ENST00000482889 MKRN3Q13064 507 aaKnown RBP8.14□□□□□ -1.11
CLCC1-209ENST00000482889 POTEFA5A3E0 1075 aa8.13□□□□□ -1.11
CLCC1-209ENST00000482889 STK25O00506 426 aa8.13□□□□□ -1.11
CLCC1-209ENST00000482889 FAM163AQ96GL9 167 aaPredicted RBP8.13□□□□□ -1.11
CLCC1-209ENST00000482889 BCL11BQ9C0K0 894 aaPredicted RBP8.13□□□□□ -1.11
CLCC1-209ENST00000482889 ILDR1Q86SU0 546 aaPredicted RBP8.12□□□□□ -1.11
CLCC1-209ENST00000482889 SEC24BO95487 1268 aa8.11□□□□□ -1.11
CLCC1-209ENST00000482889 MAMSTRQ6ZN01 415 aa8.11□□□□□ -1.11
CLCC1-209ENST00000482889 HS6ST3Q8IZP7 471 aa8.11□□□□□ -1.11
CLCC1-209ENST00000482889 OCEL1Q9H607 264 aa8.11□□□□□ -1.11
CLCC1-209ENST00000482889 COLQQ9Y215 455 aaPredicted RBP8.11□□□□□ -1.11
CLCC1-209ENST00000482889 STK24Q9Y6E0 443 aa8.11□□□□□ -1.11
CLCC1-209ENST00000482889 SOX12O15370 315 aa8.1□□□□□ -1.11
CLCC1-209ENST00000482889 CHGAP10645 457 aaKnown RBP8.1□□□□□ -1.11
CLCC1-209ENST00000482889 PLCG2P16885 1265 aa8.1□□□□□ -1.11
CLCC1-209ENST00000482889 EFCAB3Q8N7B9 438 aa8.1□□□□□ -1.11
CLCC1-209ENST00000482889 SPRYD3Q8NCJ5 442 aa8.1□□□□□ -1.11
CLCC1-209ENST00000482889 TPRNQ4KMQ1 711 aa8.09□□□□□ -1.11
CLCC1-209ENST00000482889 LCE2DQ5TA82 110 aaPredicted RBP8.09□□□□□ -1.11
CLCC1-209ENST00000482889 DNAJC5Q9H3Z4 198 aa8.09□□□□□ -1.11
CLCC1-209ENST00000482889 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.08□□□□□ -1.121e-6■■□□□ 13.4
CLCC1-209ENST00000482889 PDCD7Q8N8D1 485 aaKnown RBP8.07□□□□□ -1.12
CLCC1-209ENST00000482889 NLRP6P59044 892 aa8.03□□□□□ -1.12
CLCC1-209ENST00000482889 SCUBE2Q9NQ36 999 aa8.03□□□□□ -1.12
CLCC1-209ENST00000482889 FBXO22Q8NEZ5 403 aa8.02□□□□□ -1.13
CLCC1-209ENST00000482889 MFRPQ9BY79 579 aa8.02□□□□□ -1.13
CLCC1-209ENST00000482889 PHF8Q9UPP1 1060 aa8.02□□□□□ -1.13
CLCC1-209ENST00000482889 NKX1-1Q15270 411 aaPredicted RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms