RNA–Protein interactions for RNA: ENST00000482889.1

CLCC1-209, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 752 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-209ENST00000482889 AEBP2Q6ZN18 517 aaPredicted RBP16.89■□□□□ 0.29
CLCC1-209ENST00000482889 CHIC1Q5VXU3 224 aa16.43■□□□□ 0.22
CLCC1-209ENST00000482889 PHF23Q9BUL5 403 aaPredicted RBP14.4□□□□□ -0.1
CLCC1-209ENST00000482889 SENP3Q9H4L4 574 aaPredicted RBP14.39□□□□□ -0.11
CLCC1-209ENST00000482889 FOXD1Q16676 465 aa13.46□□□□□ -0.25
CLCC1-209ENST00000482889 PLPPR3Q6T4P5 718 aa13.31□□□□□ -0.28
CLCC1-209ENST00000482889 POTEDQ86YR6 584 aa13.21□□□□□ -0.29
CLCC1-209ENST00000482889 MSH5O43196 834 aa12.73□□□□□ -0.37
CLCC1-209ENST00000482889 PPP6R1Q9UPN7 881 aa12.73□□□□□ -0.37
CLCC1-209ENST00000482889 ADRA2BP18089 450 aa12.69□□□□□ -0.38
CLCC1-209ENST00000482889 PIAS4Q8N2W9 510 aaPredicted RBP12.53□□□□□ -0.4
CLCC1-209ENST00000482889 SCAF1Q9H7N4 1312 aaKnown RBP11.69□□□□□ -0.54
CLCC1-209ENST00000482889 PPP4R3CPQ6ZMV5 832 aa11.68□□□□□ -0.54
CLCC1-209ENST00000482889 MAPK8IP2Q13387 824 aaPredicted RBP11.54□□□□□ -0.56
CLCC1-209ENST00000482889 DMRT2Q9Y5R5 561 aa11.47□□□□□ -0.57
CLCC1-209ENST00000482889 CNKSR2Q8WXI2 1034 aa11.41□□□□□ -0.58
CLCC1-209ENST00000482889 NCBP3Q53F19 620 aaKnown RBP11.37□□□□□ -0.59
CLCC1-209ENST00000482889 KCNA4P22459 653 aa11.26□□□□□ -0.61
CLCC1-209ENST00000482889 CACNB1Q02641 598 aaPredicted RBP11.24□□□□□ -0.61
CLCC1-209ENST00000482889 RNF216Q9NWF9 866 aaPredicted RBP11.22□□□□□ -0.61
CLCC1-209ENST00000482889 HOXD11P31277 338 aaPredicted RBP11.21□□□□□ -0.61
CLCC1-209ENST00000482889 NPM3O75607 178 aaKnown RBP11.18□□□□□ -0.62
CLCC1-209ENST00000482889 DCAF8L1A6NGE4 600 aa11□□□□□ -0.65
CLCC1-209ENST00000482889 DNAJC5BQ9UF47 199 aa10.99□□□□□ -0.65
CLCC1-209ENST00000482889 RNF39Q9H2S5 420 aa10.78□□□□□ -0.68
CLCC1-209ENST00000482889 SLC4A1APQ9BWU0 796 aaKnown RBP10.72□□□□□ -0.69
CLCC1-209ENST00000482889 EHMT2Q96KQ7 1210 aa10.63□□□□□ -0.71
CLCC1-209ENST00000482889 C1QBPQ07021 282 aaKnown RBP10.62□□□□□ -0.71
CLCC1-209ENST00000482889 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.62□□□□□ -0.71
CLCC1-209ENST00000482889 SLC4A2P04920 1241 aa10.58□□□□□ -0.72
CLCC1-209ENST00000482889 U3KPZ7 1027 aaPredicted RBP10.46□□□□□ -0.73
CLCC1-209ENST00000482889 FOXD4L1Q9NU39 408 aa10.44□□□□□ -0.74
CLCC1-209ENST00000482889 ZBTB22O15209 634 aa10.36□□□□□ -0.75
CLCC1-209ENST00000482889 MYCNP04198 464 aaPredicted RBP10.35□□□□□ -0.75
CLCC1-209ENST00000482889 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.34□□□□□ -0.75
CLCC1-209ENST00000482889 HNRNPUL2Q1KMD3 747 aaKnown RBP10.34□□□□□ -0.75
CLCC1-209ENST00000482889 CSRNP3Q8WYN3 585 aa10.34□□□□□ -0.75
CLCC1-209ENST00000482889 POTEHQ6S545 545 aa10.28□□□□□ -0.76
CLCC1-209ENST00000482889 SAMD1Q6SPF0 538 aaPredicted RBP10.28□□□□□ -0.76
CLCC1-209ENST00000482889 APLP2Q06481 763 aa10.27□□□□□ -0.77
CLCC1-209ENST00000482889 SPINK5Q9NQ38 1064 aaPredicted RBP10.16□□□□□ -0.78
CLCC1-209ENST00000482889 CAPN15O75808 1086 aa10.13□□□□□ -0.79
CLCC1-209ENST00000482889 ATXN8OSP0DMR3 200 aa10.13□□□□□ -0.79
CLCC1-209ENST00000482889 ZNF219Q9P2Y4 722 aaPredicted RBP10.12□□□□□ -0.79
CLCC1-209ENST00000482889 TRHP20396 242 aaPredicted RBP10.04□□□□□ -0.8
CLCC1-209ENST00000482889 DSG3P32926 999 aa10.03□□□□□ -0.8
CLCC1-209ENST00000482889 ATF5Q9Y2D1 282 aaPredicted RBP10.03□□□□□ -0.8
CLCC1-209ENST00000482889 ABCB7O75027 752 aa9.91□□□□□ -0.82
CLCC1-209ENST00000482889 POLA2Q14181 598 aa9.88□□□□□ -0.83
CLCC1-209ENST00000482889 ZBTB12Q9Y330 459 aaPredicted RBP9.78□□□□□ -0.84
CLCC1-209ENST00000482889 FBLN2P98095 1184 aa9.65□□□□□ -0.86
CLCC1-209ENST00000482889 MKRN4PQ13434 485 aaPredicted RBP9.61□□□□□ -0.87
CLCC1-209ENST00000482889 RBM42Q9BTD8 480 aaKnown RBP9.59□□□□□ -0.87
CLCC1-209ENST00000482889 OSCARQ8IYS5 282 aa9.54□□□□□ -0.88
CLCC1-209ENST00000482889 SPDYE2BA6NHP3 402 aa9.5□□□□□ -0.89
CLCC1-209ENST00000482889 SPDYE6P0CI01 402 aa9.5□□□□□ -0.89
CLCC1-209ENST00000482889 SPDYE2Q495Y8 402 aa9.5□□□□□ -0.89
CLCC1-209ENST00000482889 CHRDL2Q6WN34 429 aa9.5□□□□□ -0.89
CLCC1-209ENST00000482889 AKT1S1Q96B36 256 aa9.44□□□□□ -0.9
CLCC1-209ENST00000482889 SP7Q8TDD2 431 aaPredicted RBP9.41□□□□□ -0.9
CLCC1-209ENST00000482889 SSUH2Q9Y2M2 353 aa9.41□□□□□ -0.9
CLCC1-209ENST00000482889 ZNF692Q9BU19 519 aaPredicted RBP9.4□□□□□ -0.9
CLCC1-209ENST00000482889 RTN4Q9NQC3 1192 aaKnown RBP9.36□□□□□ -0.91
CLCC1-209ENST00000482889 SPDYE4A6NLX3 237 aa9.35□□□□□ -0.91
CLCC1-209ENST00000482889 REM2Q8IYK8 340 aaPredicted RBP9.32□□□□□ -0.92
CLCC1-209ENST00000482889 PABPN1Q86U42 306 aaKnown RBP eCLIP9.25□□□□□ -0.93
CLCC1-209ENST00000482889 FKBP8Q14318 412 aa9.24□□□□□ -0.93
CLCC1-209ENST00000482889 PROM2Q8N271 834 aa9.24□□□□□ -0.93
CLCC1-209ENST00000482889 SPDYE1Q8NFV5 336 aaPredicted RBP9.22□□□□□ -0.93
CLCC1-209ENST00000482889 PITPNM1O00562 1244 aa9.21□□□□□ -0.94
CLCC1-209ENST00000482889 PIP4P2Q8N4L2 257 aa9.21□□□□□ -0.94
CLCC1-209ENST00000482889 HAX1O00165 279 aa9.18□□□□□ -0.94
CLCC1-209ENST00000482889 AMER1Q5JTC6 1135 aaPredicted RBP9.17□□□□□ -0.94
CLCC1-209ENST00000482889 SLC24A1O60721 1099 aa9.14□□□□□ -0.95
CLCC1-209ENST00000482889 STAG3Q9UJ98 1225 aa9.14□□□□□ -0.95
CLCC1-209ENST00000482889 CLEC11AQ9Y240 323 aa9.12□□□□□ -0.95
CLCC1-209ENST00000482889 EVX2Q03828 476 aa9.1□□□□□ -0.95
CLCC1-209ENST00000482889 FXR2P51116 673 aaKnown RBP eCLIP9.09□□□□□ -0.95
CLCC1-209ENST00000482889 PRR29P0C7W0 189 aa9.06□□□□□ -0.96
CLCC1-209ENST00000482889 FBXO3Q9UK99 471 aa8.99□□□□□ -0.97
CLCC1-209ENST00000482889 PRKAR2AP13861 404 aaKnown RBP8.97□□□□□ -0.97
CLCC1-209ENST00000482889 CREBZFQ9NS37 354 aa8.93□□□□□ -0.98
CLCC1-209ENST00000482889 CHADLQ6NUI6 762 aa8.92□□□□□ -0.98
CLCC1-209ENST00000482889 FARP1Q9Y4F1 1045 aaPredicted RBP8.86□□□□□ -0.99
CLCC1-209ENST00000482889 PLEKHG5O94827 1062 aa8.85□□□□□ -0.99
CLCC1-209ENST00000482889 MIER1Q8N108 512 aa8.85□□□□□ -0.99
CLCC1-209ENST00000482889 MNX1P50219 401 aaPredicted RBP8.84□□□□□ -0.99
CLCC1-209ENST00000482889 VASPP50552 380 aaPredicted RBP8.84□□□□□ -0.99
CLCC1-209ENST00000482889 PLCD3Q8N3E9 789 aa8.84□□□□□ -0.99
CLCC1-209ENST00000482889 LHX8Q68G74 356 aa8.82□□□□□ -1
CLCC1-209ENST00000482889 ZBTB47Q9UFB7 747 aaPredicted RBP8.81□□□□□ -1
CLCC1-209ENST00000482889 NPM1P06748 294 aaKnown RBP eCLIP8.8□□□□□ -1
CLCC1-209ENST00000482889 C19orf67A6NJJ6 358 aa8.78□□□□□ -1
CLCC1-209ENST00000482889 GABBR2O75899 941 aa8.78□□□□□ -1
CLCC1-209ENST00000482889 PLSCR2Q9NRY7 297 aa8.72□□□□□ -1.01
CLCC1-209ENST00000482889 CD44P16070 742 aaKnown RBP8.71□□□□□ -1.02
CLCC1-209ENST00000482889 IFNLR1Q8IU57 520 aaPredicted RBP8.7□□□□□ -1.02
CLCC1-209ENST00000482889 KLHL34Q8N239 644 aa8.68□□□□□ -1.02
CLCC1-209ENST00000482889 PAK3O75914 559 aaPredicted RBP8.67□□□□□ -1.02
CLCC1-209ENST00000482889 NUBP1P53384 320 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms