RNA–Protein interactions for RNA: ENST00000480242.1

SNRNP200-203, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 3,409 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-203ENST00000480242 NEUROD1Q13562 356 aa13.22□□□□□ -0.29
SNRNP200-203ENST00000480242 GRIN2BQ13224 1484 aa13.22□□□□□ -0.29
SNRNP200-203ENST00000480242 GTF3C3Q9Y5Q9 886 aa13.2□□□□□ -0.3
SNRNP200-203ENST00000480242 IGF1RP08069 1367 aa13.2□□□□□ -0.3
SNRNP200-203ENST00000480242 ADCY10Q96PN6 1610 aa13.19□□□□□ -0.3
SNRNP200-203ENST00000480242 TNIKQ9UKE5 1360 aa13.19□□□□□ -0.3
SNRNP200-203ENST00000480242 GAPVD1Q14C86 1478 aa13.18□□□□□ -0.3
SNRNP200-203ENST00000480242 RAPGEF2Q9Y4G8 1499 aa13.17□□□□□ -0.3
SNRNP200-203ENST00000480242 FHAD1B1AJZ9 1412 aa13.16□□□□□ -0.3
SNRNP200-203ENST00000480242 RAD54L2Q9Y4B4 1467 aa13.16□□□□□ -0.3
SNRNP200-203ENST00000480242 SYNJ2O15056 1496 aa13.15□□□□□ -0.3
SNRNP200-203ENST00000480242 KIAA0556O60303 1618 aa13.13□□□□□ -0.31
SNRNP200-203ENST00000480242 IQGAP2Q13576 1575 aa13.12□□□□□ -0.31
SNRNP200-203ENST00000480242 ARHGEF11O15085 1522 aa13.11□□□□□ -0.31
SNRNP200-203ENST00000480242 GRIN2AQ12879 1464 aa13.11□□□□□ -0.31
SNRNP200-203ENST00000480242 TRIM41Q8WV44 630 aa13.1□□□□□ -0.31
SNRNP200-203ENST00000480242 ZNF608Q9ULD9 1512 aaPredicted RBP13.1□□□□□ -0.31
SNRNP200-203ENST00000480242 SNAPC4Q5SXM2 1469 aa13.1□□□□□ -0.31
SNRNP200-203ENST00000480242 ARAP1Q96P48 1450 aa13.1□□□□□ -0.31
SNRNP200-203ENST00000480242 CENPBP07199 599 aaPredicted RBP13.06□□□□□ -0.32
SNRNP200-203ENST00000480242 ABCA8O94911 1581 aa13.04□□□□□ -0.32
SNRNP200-203ENST00000480242 DISP1Q96F81 1524 aa13.04□□□□□ -0.32
SNRNP200-203ENST00000480242 KIAA0586Q9BVV6 1533 aa13.03□□□□□ -0.32
SNRNP200-203ENST00000480242 ARHGAP35Q9NRY4 1499 aa13.02□□□□□ -0.33
SNRNP200-203ENST00000480242 TTBK1Q5TCY1 1321 aaPredicted RBP13.02□□□□□ -0.33
SNRNP200-203ENST00000480242 KDM5BQ9UGL1 1544 aa13□□□□□ -0.33
SNRNP200-203ENST00000480242 FYCO1Q9BQS8 1478 aa12.98□□□□□ -0.33
SNRNP200-203ENST00000480242 RANGAP1P46060 587 aaPredicted RBP12.98□□□□□ -0.33
SNRNP200-203ENST00000480242 ERCC6Q03468 1493 aa12.97□□□□□ -0.33
SNRNP200-203ENST00000480242 UHRF1BP1LA0JNW5 1464 aa12.96□□□□□ -0.33
SNRNP200-203ENST00000480242 PCF11O94913 1555 aaKnown RBP12.96□□□□□ -0.33
SNRNP200-203ENST00000480242 TIAM1Q13009 1591 aa12.94□□□□□ -0.34
SNRNP200-203ENST00000480242 HECW1Q76N89 1606 aa12.93□□□□□ -0.34
SNRNP200-203ENST00000480242 RAPGEF6Q8TEU7 1601 aa12.92□□□□□ -0.34
SNRNP200-203ENST00000480242 DIEXFQ68CQ4 756 aaKnown RBP12.92□□□□□ -0.34
SNRNP200-203ENST00000480242 CARMIL1Q5VZK9 1371 aa12.92□□□□□ -0.34
SNRNP200-203ENST00000480242 CEP162Q5TB80 1403 aa12.91□□□□□ -0.34
SNRNP200-203ENST00000480242 CROCC2H7BZ55 1655 aa12.9□□□□□ -0.34
SNRNP200-203ENST00000480242 VPS8Q8N3P4 1428 aa12.89□□□□□ -0.35
SNRNP200-203ENST00000480242 CSRNP3Q8WYN3 585 aa12.87□□□□□ -0.35
SNRNP200-203ENST00000480242 YTHDC1Q96MU7 727 aaKnown RBP12.87□□□□□ -0.35
SNRNP200-203ENST00000480242 CASKIN1Q8WXD9 1431 aa12.87□□□□□ -0.35
SNRNP200-203ENST00000480242 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.87□□□□□ -0.35
SNRNP200-203ENST00000480242 ARAP3Q8WWN8 1544 aa12.86□□□□□ -0.35
SNRNP200-203ENST00000480242 BCORL1Q5H9F3 1711 aa12.84□□□□□ -0.35
SNRNP200-203ENST00000480242 CCER1Q8TC90 406 aaPredicted RBP12.84□□□□□ -0.35
SNRNP200-203ENST00000480242 CCDC18Q5T9S5 1454 aa12.83□□□□□ -0.36
SNRNP200-203ENST00000480242 EHBP1L1Q8N3D4 1523 aa12.79□□□□□ -0.36
SNRNP200-203ENST00000480242 ITSN2Q9NZM3 1697 aa12.79□□□□□ -0.36
SNRNP200-203ENST00000480242 TCOF1Q13428 1488 aaKnown RBP12.78□□□□□ -0.36
SNRNP200-203ENST00000480242 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.78□□□□□ -0.36
SNRNP200-203ENST00000480242 CLIP1P30622 1438 aa12.78□□□□□ -0.36
SNRNP200-203ENST00000480242 MAGI3Q5TCQ9 1506 aa12.78□□□□□ -0.36
SNRNP200-203ENST00000480242 CDC42BPAQ5VT25 1732 aa12.76□□□□□ -0.37
SNRNP200-203ENST00000480242 PREX2Q70Z35 1606 aa12.76□□□□□ -0.37
SNRNP200-203ENST00000480242 ABCC2Q92887 1545 aa12.76□□□□□ -0.37
SNRNP200-203ENST00000480242 BCL11AQ9H165 835 aa12.76□□□□□ -0.37
SNRNP200-203ENST00000480242 GCC2Q8IWJ2 1684 aa12.75□□□□□ -0.37
SNRNP200-203ENST00000480242 ZCCHC11Q5TAX3 1644 aaKnown RBP12.75□□□□□ -0.37
SNRNP200-203ENST00000480242 MAST1Q9Y2H9 1570 aa12.75□□□□□ -0.37
SNRNP200-203ENST00000480242 SUPT6HQ7KZ85 1726 aaKnown RBP12.75□□□□□ -0.37
SNRNP200-203ENST00000480242 GLI2P10070 1586 aa12.74□□□□□ -0.37
SNRNP200-203ENST00000480242 ABCA9Q8IUA7 1624 aa12.74□□□□□ -0.37
SNRNP200-203ENST00000480242 UBTFP17480 764 aaKnown RBP12.73□□□□□ -0.37
SNRNP200-203ENST00000480242 NUP153P49790 1475 aaKnown RBP12.72□□□□□ -0.37
SNRNP200-203ENST00000480242 MAPKBP1O60336 1514 aa12.72□□□□□ -0.37
SNRNP200-203ENST00000480242 FMN1Q68DA7 1419 aa12.72□□□□□ -0.37
SNRNP200-203ENST00000480242 TDRD9Q8NDG6 1382 aaKnown RBP12.72□□□□□ -0.37
SNRNP200-203ENST00000480242 RRBP1Q9P2E9 1410 aaKnown RBP12.72□□□□□ -0.37
SNRNP200-203ENST00000480242 ADGBQ8N7X0 1667 aa12.71□□□□□ -0.37
SNRNP200-203ENST00000480242 MAP3K4Q9Y6R4 1608 aa12.7□□□□□ -0.38
SNRNP200-203ENST00000480242 ERCC6L2Q5T890 1561 aa12.7□□□□□ -0.38
SNRNP200-203ENST00000480242 CDC42BPBQ9Y5S2 1711 aa12.69□□□□□ -0.38
SNRNP200-203ENST00000480242 ABCC10Q5T3U5 1492 aa12.69□□□□□ -0.38
SNRNP200-203ENST00000480242 ARHGEF5Q12774 1597 aa12.68□□□□□ -0.38
SNRNP200-203ENST00000480242 PPRC1Q5VV67 1664 aaKnown RBP12.68□□□□□ -0.38
SNRNP200-203ENST00000480242 LRRC9Q6ZRR7 1453 aa12.67□□□□□ -0.38
SNRNP200-203ENST00000480242 EPRSP07814 1512 aaKnown RBP12.66□□□□□ -0.38
SNRNP200-203ENST00000480242 AKNAQ7Z591 1439 aa12.64□□□□□ -0.39
SNRNP200-203ENST00000480242 DNMT1P26358 1616 aaKnown RBP12.63□□□□□ -0.39
SNRNP200-203ENST00000480242 MYO5CQ9NQX4 1742 aa12.63□□□□□ -0.39
SNRNP200-203ENST00000480242 RIMBP3CA6NJZ7 1639 aa12.63□□□□□ -0.39
SNRNP200-203ENST00000480242 RIMBP3BA6NNM3 1639 aa12.63□□□□□ -0.39
SNRNP200-203ENST00000480242 RIMBP3Q9UFD9 1639 aa12.63□□□□□ -0.39
SNRNP200-203ENST00000480242 CFAP74Q9C0B2 1584 aa12.62□□□□□ -0.39
SNRNP200-203ENST00000480242 PLXNC1O60486 1568 aa12.62□□□□□ -0.39
SNRNP200-203ENST00000480242 DEPDC5O75140 1603 aa12.59□□□□□ -0.39
SNRNP200-203ENST00000480242 ANP32EQ9BTT0 268 aa12.59□□□□□ -0.39
SNRNP200-203ENST00000480242 WDR7Q9Y4E6 1490 aa12.59□□□□□ -0.39
SNRNP200-203ENST00000480242 SHANK2Q9UPX8 1470 aa12.58□□□□□ -0.4
SNRNP200-203ENST00000480242 KIF13AQ9H1H9 1805 aa12.58□□□□□ -0.4
SNRNP200-203ENST00000480242 KIF14Q15058 1648 aa12.57□□□□□ -0.4
SNRNP200-203ENST00000480242 ZNF316A6NFI3 1004 aaPredicted RBP12.57□□□□□ -0.4
SNRNP200-203ENST00000480242 MIER1Q8N108 512 aa12.57□□□□□ -0.4
SNRNP200-203ENST00000480242 KDM5DQ9BY66 1539 aa12.56□□□□□ -0.4
SNRNP200-203ENST00000480242 REREQ9P2R6 1566 aa12.56□□□□□ -0.4
SNRNP200-203ENST00000480242 ADGRL2O95490 1459 aa12.55□□□□□ -0.4
SNRNP200-203ENST00000480242 INO80Q9ULG1 1556 aaPredicted RBP12.55□□□□□ -0.4
SNRNP200-203ENST00000480242 EIF2AK4Q9P2K8 1649 aaKnown RBP12.54□□□□□ -0.4
SNRNP200-203ENST00000480242 TTC37Q6PGP7 1564 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms