RNA–Protein interactions for RNA: ENST00000480054.1

RABGAP1-210, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 3

Gene RABGAP1, Length 423 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-210ENST00000480054 CHGAP10645 457 aaKnown RBP13.12□□□□□ -0.31
RABGAP1-210ENST00000480054 DNAJC5Q9H3Z4 198 aa13.12□□□□□ -0.31
RABGAP1-210ENST00000480054 TAOK2Q9UL54 1235 aa13.12□□□□□ -0.31
RABGAP1-210ENST00000480054 PAXIP1Q6ZW49 1069 aaPredicted RBP13.11□□□□□ -0.31
RABGAP1-210ENST00000480054 HS6ST3Q8IZP7 471 aa13.11□□□□□ -0.31
RABGAP1-210ENST00000480054 RNF25Q96BH1 459 aaPredicted RBP13.11□□□□□ -0.31
RABGAP1-210ENST00000480054 SPRYD3Q8NCJ5 442 aa13.1□□□□□ -0.31
RABGAP1-210ENST00000480054 RIOK3O14730 519 aaKnown RBP13.07□□□□□ -0.32
RABGAP1-210ENST00000480054 RASEFQ8IZ41 740 aa13.07□□□□□ -0.32
RABGAP1-210ENST00000480054 CFAP44Q96MT7 982 aa13.06□□□□□ -0.32
RABGAP1-210ENST00000480054 SGIP1Q9BQI5 828 aa13.01□□□□□ -0.33
RABGAP1-210ENST00000480054 VGFO15240 615 aaPredicted RBP12.99□□□□□ -0.33
RABGAP1-210ENST00000480054 KDM2AQ9Y2K7 1162 aa12.94□□□□□ -0.34
RABGAP1-210ENST00000480054 FARP1Q9Y4F1 1045 aaPredicted RBP12.94□□□□□ -0.34
RABGAP1-210ENST00000480054 CHADLQ6NUI6 762 aa12.92□□□□□ -0.34
RABGAP1-210ENST00000480054 BCANQ96GW7 911 aa12.91□□□□□ -0.34
RABGAP1-210ENST00000480054 PYGBP11216 843 aa12.9□□□□□ -0.34
RABGAP1-210ENST00000480054 FXR2P51116 673 aaKnown RBP eCLIP12.9□□□□□ -0.34
RABGAP1-210ENST00000480054 STK25O00506 426 aa12.89□□□□□ -0.35
RABGAP1-210ENST00000480054 TSHZ2Q9NRE2 1034 aa12.89□□□□□ -0.35
RABGAP1-210ENST00000480054 NKX1-1Q15270 411 aaPredicted RBP12.88□□□□□ -0.35
RABGAP1-210ENST00000480054 PRKAR2AP13861 404 aaKnown RBP12.86□□□□□ -0.35
RABGAP1-210ENST00000480054 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.84□□□□□ -0.35
RABGAP1-210ENST00000480054 GTPBP6O43824 516 aaPredicted RBP12.84□□□□□ -0.35
RABGAP1-210ENST00000480054 ZFP91Q96JP5 570 aaPredicted RBP12.84□□□□□ -0.35
RABGAP1-210ENST00000480054 ZNF467Q7Z7K2 595 aaPredicted RBP12.83□□□□□ -0.36
RABGAP1-210ENST00000480054 TSPYL2Q9H2G4 693 aaPredicted RBP12.82□□□□□ -0.36
RABGAP1-210ENST00000480054 RYDENQ9NUL5 291 aaKnown RBP12.82□□□□□ -0.36
RABGAP1-210ENST00000480054 BCL11BQ9C0K0 894 aaPredicted RBP12.81□□□□□ -0.36
RABGAP1-210ENST00000480054 STK24Q9Y6E0 443 aa12.79□□□□□ -0.36
RABGAP1-210ENST00000480054 CCDC61Q9Y6R9 512 aa12.79□□□□□ -0.36
RABGAP1-210ENST00000480054 CHRDL2Q6WN34 429 aa12.77□□□□□ -0.37
RABGAP1-210ENST00000480054 PDAP1Q13442 181 aaKnown RBP12.73□□□□□ -0.37
RABGAP1-210ENST00000480054 PAK3O75914 559 aaPredicted RBP12.72□□□□□ -0.37
RABGAP1-210ENST00000480054 PIP4P2Q8N4L2 257 aa12.72□□□□□ -0.37
RABGAP1-210ENST00000480054 ZNF579Q8NAF0 562 aaKnown RBP12.72□□□□□ -0.37
RABGAP1-210ENST00000480054 PCDHB8Q9UN66 801 aa12.66□□□□□ -0.38
RABGAP1-210ENST00000480054 PCDHB13Q9Y5F0 798 aa12.66□□□□□ -0.38
RABGAP1-210ENST00000480054 PSEN1P49768 467 aa12.63□□□□□ -0.39
RABGAP1-210ENST00000480054 KIF12Q96FN5 646 aa12.62□□□□□ -0.39
RABGAP1-210ENST00000480054 MAP3K13O43283 966 aa12.58□□□□□ -0.4
RABGAP1-210ENST00000480054 IFNL1Q8IU54 200 aa12.58□□□□□ -0.4
RABGAP1-210ENST00000480054 CD44P16070 742 aaKnown RBP12.52□□□□□ -0.41
RABGAP1-210ENST00000480054 MFRPQ9BY79 579 aa12.52□□□□□ -0.41
RABGAP1-210ENST00000480054 ZRANB1Q9UGI0 708 aa12.52□□□□□ -0.41
RABGAP1-210ENST00000480054 NBR1Q14596 966 aa12.51□□□□□ -0.41
RABGAP1-210ENST00000480054 SOX12O15370 315 aa12.5□□□□□ -0.41
RABGAP1-210ENST00000480054 NLRP6P59044 892 aa12.46□□□□□ -0.41
RABGAP1-210ENST00000480054 EFCAB3Q8N7B9 438 aa12.45□□□□□ -0.42
RABGAP1-210ENST00000480054 FBXO22Q8NEZ5 403 aa12.44□□□□□ -0.42
RABGAP1-210ENST00000480054 CABP2Q9NPB3 220 aa12.44□□□□□ -0.42
RABGAP1-210ENST00000480054 C19orf67A6NJJ6 358 aa12.43□□□□□ -0.42
RABGAP1-210ENST00000480054 PRKCSHP14314 528 aaPredicted RBP12.43□□□□□ -0.42
RABGAP1-210ENST00000480054 PHF12Q96QT6 1004 aa12.42□□□□□ -0.42
RABGAP1-210ENST00000480054 P3H3Q8IVL6 736 aa12.41□□□□□ -0.42
RABGAP1-210ENST00000480054 TPRNQ4KMQ1 711 aa12.4□□□□□ -0.42
RABGAP1-210ENST00000480054 CADPS2Q86UW7 1296 aa12.4□□□□□ -0.42
RABGAP1-210ENST00000480054 WDR70Q9NW82 654 aa12.37□□□□□ -0.43
RABGAP1-210ENST00000480054 PHF8Q9UPP1 1060 aa12.37□□□□□ -0.43
RABGAP1-210ENST00000480054 PPP1R37O75864 691 aa12.35□□□□□ -0.43
RABGAP1-210ENST00000480054 MS4A3Q96HJ5 214 aa12.32□□□□□ -0.44
RABGAP1-210ENST00000480054 TMEM106CQ9BVX2 250 aa12.32□□□□□ -0.44
RABGAP1-210ENST00000480054 TIE1P35590 1138 aa12.3□□□□□ -0.44
RABGAP1-210ENST00000480054 CLCN6P51797 869 aa12.3□□□□□ -0.44
RABGAP1-210ENST00000480054 GOLGA2Q08379 1002 aa12.3□□□□□ -0.44
RABGAP1-210ENST00000480054 POTEHQ6S545 545 aa12.29□□□□□ -0.44
RABGAP1-210ENST00000480054 MS4A4AQ96JQ5 239 aa12.28□□□□□ -0.44
RABGAP1-210ENST00000480054 KCNV2Q8TDN2 545 aa12.27□□□□□ -0.45
RABGAP1-210ENST00000480054 TRPC6Q9Y210 931 aa12.27□□□□□ -0.45
RABGAP1-210ENST00000480054 MKRN3Q13064 507 aaKnown RBP12.25□□□□□ -0.45
RABGAP1-210ENST00000480054 ILDR1Q86SU0 546 aaPredicted RBP12.25□□□□□ -0.45
RABGAP1-210ENST00000480054 ARHGEF1Q92888 912 aaKnown RBP12.23□□□□□ -0.45
RABGAP1-210ENST00000480054 TTLL13PA6NNM8 815 aa12.22□□□□□ -0.45
RABGAP1-210ENST00000480054 PDE4AP27815 886 aa12.21□□□□□ -0.45
RABGAP1-210ENST00000480054 E2F4Q16254 413 aa12.2□□□□□ -0.46
RABGAP1-210ENST00000480054 NCKAP5LQ9HCH0 1330 aa12.19□□□□□ -0.46
RABGAP1-210ENST00000480054 MFSD10Q14728 455 aa12.18□□□□□ -0.46
RABGAP1-210ENST00000480054 CRISPLD2Q9H0B8 497 aa12.18□□□□□ -0.46
RABGAP1-210ENST00000480054 BMP2KQ9NSY1 1161 aaPredicted RBP12.18□□□□□ -0.46
RABGAP1-210ENST00000480054 GALR2O43603 387 aaPredicted RBP12.14□□□□□ -0.47
RABGAP1-210ENST00000480054 LARP6Q9BRS8 491 aaKnown RBP12.14□□□□□ -0.47
RABGAP1-210ENST00000480054 HAX1O00165 279 aa12.13□□□□□ -0.47
RABGAP1-210ENST00000480054 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.13□□□□□ -0.476e-7■■■□□ 14.8
RABGAP1-210ENST00000480054 ARIH1Q9Y4X5 557 aaPredicted RBP12.13□□□□□ -0.47
RABGAP1-210ENST00000480054 TRIM35Q9UPQ4 493 aa12.12□□□□□ -0.47
RABGAP1-210ENST00000480054 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.11□□□□□ -0.47
RABGAP1-210ENST00000480054 DDX27Q96GQ7 796 aaKnown RBP12.1□□□□□ -0.47
RABGAP1-210ENST00000480054 CAMK2BQ13554 666 aa12.08□□□□□ -0.48
RABGAP1-210ENST00000480054 TULP1O00294 542 aaPredicted RBP12.07□□□□□ -0.48
RABGAP1-210ENST00000480054 EVX2Q03828 476 aa12.07□□□□□ -0.48
RABGAP1-210ENST00000480054 IER5LQ5T953 404 aa12.05□□□□□ -0.48
RABGAP1-210ENST00000480054 ASTLQ6HA08 431 aaPredicted RBP12.05□□□□□ -0.48
RABGAP1-210ENST00000480054 LMOD2Q6P5Q4 547 aa12.05□□□□□ -0.48
RABGAP1-210ENST00000480054 GPHNQ9NQX3 736 aaPredicted RBP12.05□□□□□ -0.48
RABGAP1-210ENST00000480054 TESPA1A2RU30 521 aaPredicted RBP12.03□□□□□ -0.48
RABGAP1-210ENST00000480054 ATMINO43313 823 aaPredicted RBP12.03□□□□□ -0.48
RABGAP1-210ENST00000480054 ATN1P54259 1190 aaPredicted RBP12.02□□□□□ -0.49
RABGAP1-210ENST00000480054 PDCD7Q8N8D1 485 aaKnown RBP12.02□□□□□ -0.49
RABGAP1-210ENST00000480054 IRX5P78411 483 aaPredicted RBP12.01□□□□□ -0.49
RABGAP1-210ENST00000480054 TMEM121BQ9BXQ6 578 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms