RNA–Protein interactions for RNA: ENST00000480054.1

RABGAP1-210, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 3

Gene RABGAP1, Length 423 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-210ENST00000480054 CHIC1Q5VXU3 224 aa24.12■■□□□ 1.45
RABGAP1-210ENST00000480054 AEBP2Q6ZN18 517 aaPredicted RBP24.11■■□□□ 1.45
RABGAP1-210ENST00000480054 PHF23Q9BUL5 403 aaPredicted RBP21.24■□□□□ 0.99
RABGAP1-210ENST00000480054 SENP3Q9H4L4 574 aaPredicted RBP20.44■□□□□ 0.86
RABGAP1-210ENST00000480054 PLPPR3Q6T4P5 718 aa19.84■□□□□ 0.77
RABGAP1-210ENST00000480054 FOXD1Q16676 465 aa18.85■□□□□ 0.61
RABGAP1-210ENST00000480054 PPP6R1Q9UPN7 881 aa18.54■□□□□ 0.56
RABGAP1-210ENST00000480054 ADRA2BP18089 450 aa18.52■□□□□ 0.56
RABGAP1-210ENST00000480054 PIAS4Q8N2W9 510 aaPredicted RBP17.88■□□□□ 0.45
RABGAP1-210ENST00000480054 KCNA4P22459 653 aa17.66■□□□□ 0.42
RABGAP1-210ENST00000480054 PPP4R3CPQ6ZMV5 832 aa17.51■□□□□ 0.39
RABGAP1-210ENST00000480054 MSH5O43196 834 aa17.24■□□□□ 0.35
RABGAP1-210ENST00000480054 NCBP3Q53F19 620 aaKnown RBP17.24■□□□□ 0.35
RABGAP1-210ENST00000480054 SCAF1Q9H7N4 1312 aaKnown RBP17.06■□□□□ 0.32
RABGAP1-210ENST00000480054 EHMT2Q96KQ7 1210 aa16.96■□□□□ 0.31
RABGAP1-210ENST00000480054 NPM3O75607 178 aaKnown RBP16.95■□□□□ 0.3
RABGAP1-210ENST00000480054 CNKSR2Q8WXI2 1034 aa16.95■□□□□ 0.3
RABGAP1-210ENST00000480054 SLC4A1APQ9BWU0 796 aaKnown RBP16.93■□□□□ 0.3
RABGAP1-210ENST00000480054 MAPK8IP2Q13387 824 aaPredicted RBP16.64■□□□□ 0.25
RABGAP1-210ENST00000480054 CSRNP3Q8WYN3 585 aa16.64■□□□□ 0.25
RABGAP1-210ENST00000480054 DNAJC5BQ9UF47 199 aa16.57■□□□□ 0.24
RABGAP1-210ENST00000480054 RNF216Q9NWF9 866 aaPredicted RBP16.5■□□□□ 0.23
RABGAP1-210ENST00000480054 DMRT2Q9Y5R5 561 aa16.4■□□□□ 0.22
RABGAP1-210ENST00000480054 HOXD11P31277 338 aaPredicted RBP16.3■□□□□ 0.2
RABGAP1-210ENST00000480054 ZBTB22O15209 634 aa16.26■□□□□ 0.19
RABGAP1-210ENST00000480054 FOXD4L1Q9NU39 408 aa16.15■□□□□ 0.18
RABGAP1-210ENST00000480054 SLC4A2P04920 1241 aa15.88■□□□□ 0.13
RABGAP1-210ENST00000480054 POTEDQ86YR6 584 aa15.79■□□□□ 0.12
RABGAP1-210ENST00000480054 MYCNP04198 464 aaPredicted RBP15.68■□□□□ 0.1
RABGAP1-210ENST00000480054 ATXN8OSP0DMR3 200 aa15.63■□□□□ 0.09
RABGAP1-210ENST00000480054 DCAF8L1A6NGE4 600 aa15.51■□□□□ 0.07
RABGAP1-210ENST00000480054 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.44■□□□□ 0.065e-7■■■□□ 15.3
RABGAP1-210ENST00000480054 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.34■□□□□ 0.05
RABGAP1-210ENST00000480054 HNRNPUL2Q1KMD3 747 aaKnown RBP15.34■□□□□ 0.05
RABGAP1-210ENST00000480054 SAMD1Q6SPF0 538 aaPredicted RBP15.29■□□□□ 0.04
RABGAP1-210ENST00000480054 U3KPZ7 1027 aaPredicted RBP15.27■□□□□ 0.04
RABGAP1-210ENST00000480054 ATF5Q9Y2D1 282 aaPredicted RBP15.15■□□□□ 0.02
RABGAP1-210ENST00000480054 APLP2Q06481 763 aa15.05■□□□□ -0
RABGAP1-210ENST00000480054 FKBP8Q14318 412 aa14.95□□□□□ -0.02
RABGAP1-210ENST00000480054 ZNF219Q9P2Y4 722 aaPredicted RBP14.9□□□□□ -0.02
RABGAP1-210ENST00000480054 RNF39Q9H2S5 420 aa14.81□□□□□ -0.04
RABGAP1-210ENST00000480054 C1QBPQ07021 282 aaKnown RBP14.69□□□□□ -0.06
RABGAP1-210ENST00000480054 AMER1Q5JTC6 1135 aaPredicted RBP14.64□□□□□ -0.07
RABGAP1-210ENST00000480054 SPINK5Q9NQ38 1064 aaPredicted RBP14.64□□□□□ -0.07
RABGAP1-210ENST00000480054 TRHP20396 242 aaPredicted RBP14.6□□□□□ -0.07
RABGAP1-210ENST00000480054 MKRN4PQ13434 485 aaPredicted RBP14.55□□□□□ -0.08
RABGAP1-210ENST00000480054 CAPN15O75808 1086 aa14.54□□□□□ -0.08
RABGAP1-210ENST00000480054 FBLN2P98095 1184 aa14.53□□□□□ -0.08
RABGAP1-210ENST00000480054 POLA2Q14181 598 aa14.53□□□□□ -0.08
RABGAP1-210ENST00000480054 RTN4Q9NQC3 1192 aaKnown RBP14.53□□□□□ -0.08
RABGAP1-210ENST00000480054 SPDYE4A6NLX3 237 aa14.48□□□□□ -0.09
RABGAP1-210ENST00000480054 PROM2Q8N271 834 aa14.41□□□□□ -0.1
RABGAP1-210ENST00000480054 ZBTB12Q9Y330 459 aaPredicted RBP14.41□□□□□ -0.1
RABGAP1-210ENST00000480054 FBXO3Q9UK99 471 aa14.38□□□□□ -0.11
RABGAP1-210ENST00000480054 ABCB7O75027 752 aa14.28□□□□□ -0.12
RABGAP1-210ENST00000480054 DSG3P32926 999 aa14.25□□□□□ -0.13
RABGAP1-210ENST00000480054 VASPP50552 380 aaPredicted RBP14.11□□□□□ -0.15
RABGAP1-210ENST00000480054 SPDYE2BA6NHP3 402 aa14.06□□□□□ -0.16
RABGAP1-210ENST00000480054 SPDYE6P0CI01 402 aa14.06□□□□□ -0.16
RABGAP1-210ENST00000480054 SPDYE2Q495Y8 402 aa14.06□□□□□ -0.16
RABGAP1-210ENST00000480054 SLC24A1O60721 1099 aa14.02□□□□□ -0.17
RABGAP1-210ENST00000480054 ZNF692Q9BU19 519 aaPredicted RBP14.02□□□□□ -0.17
RABGAP1-210ENST00000480054 SSUH2Q9Y2M2 353 aa14□□□□□ -0.17
RABGAP1-210ENST00000480054 OSCARQ8IYS5 282 aa13.98□□□□□ -0.17
RABGAP1-210ENST00000480054 CACNB1Q02641 598 aaPredicted RBP13.97□□□□□ -0.17
RABGAP1-210ENST00000480054 IFNLR1Q8IU57 520 aaPredicted RBP13.96□□□□□ -0.17
RABGAP1-210ENST00000480054 STAG3Q9UJ98 1225 aa13.92□□□□□ -0.18
RABGAP1-210ENST00000480054 PABPN1Q86U42 306 aaKnown RBP eCLIP13.84□□□□□ -0.19
RABGAP1-210ENST00000480054 SPOCK2Q92563 424 aa13.72□□□□□ -0.21
RABGAP1-210ENST00000480054 PKD2Q13563 968 aa13.7□□□□□ -0.22
RABGAP1-210ENST00000480054 KLHL34Q8N239 644 aa13.7□□□□□ -0.22
RABGAP1-210ENST00000480054 PLCD3Q8N3E9 789 aa13.68□□□□□ -0.22
RABGAP1-210ENST00000480054 MIER1Q8N108 512 aa13.65□□□□□ -0.22
RABGAP1-210ENST00000480054 RBM42Q9BTD8 480 aaKnown RBP13.61□□□□□ -0.23
RABGAP1-210ENST00000480054 PLEKHG5O94827 1062 aa13.59□□□□□ -0.23
RABGAP1-210ENST00000480054 ZBTB47Q9UFB7 747 aaPredicted RBP13.59□□□□□ -0.23
RABGAP1-210ENST00000480054 AKT1S1Q96B36 256 aa13.56□□□□□ -0.24
RABGAP1-210ENST00000480054 PLCB2Q00722 1185 aa13.5□□□□□ -0.25
RABGAP1-210ENST00000480054 ECM2O94769 699 aaPredicted RBP13.49□□□□□ -0.25
RABGAP1-210ENST00000480054 SPDYE1Q8NFV5 336 aaPredicted RBP13.49□□□□□ -0.25
RABGAP1-210ENST00000480054 DCAF8L2P0C7V8 631 aa13.46□□□□□ -0.25
RABGAP1-210ENST00000480054 TRIM41Q8WV44 630 aa13.39□□□□□ -0.27
RABGAP1-210ENST00000480054 REM2Q8IYK8 340 aaPredicted RBP13.37□□□□□ -0.27
RABGAP1-210ENST00000480054 RGL2O15211 777 aa13.34□□□□□ -0.27
RABGAP1-210ENST00000480054 BBXQ8WY36 941 aaPredicted RBP13.34□□□□□ -0.27
RABGAP1-210ENST00000480054 CIZ1Q9ULV3 898 aaPredicted RBP13.34□□□□□ -0.27
RABGAP1-210ENST00000480054 PRR29P0C7W0 189 aa13.33□□□□□ -0.28
RABGAP1-210ENST00000480054 GSE1Q14687 1217 aa13.31□□□□□ -0.28
RABGAP1-210ENST00000480054 CLEC11AQ9Y240 323 aa13.31□□□□□ -0.28
RABGAP1-210ENST00000480054 NUBP1P53384 320 aa13.29□□□□□ -0.28
RABGAP1-210ENST00000480054 CREBZFQ9NS37 354 aa13.29□□□□□ -0.28
RABGAP1-210ENST00000480054 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.28□□□□□ -0.28
RABGAP1-210ENST00000480054 NPM1P06748 294 aaKnown RBP eCLIP13.27□□□□□ -0.29
RABGAP1-210ENST00000480054 MNX1P50219 401 aaPredicted RBP13.25□□□□□ -0.29
RABGAP1-210ENST00000480054 HAP1P54257 671 aaPredicted RBP13.21□□□□□ -0.29
RABGAP1-210ENST00000480054 PITPNM1O00562 1244 aa13.19□□□□□ -0.3
RABGAP1-210ENST00000480054 DCAF8Q5TAQ9 597 aa13.16□□□□□ -0.3
RABGAP1-210ENST00000480054 VSIG10Q8N0Z9 540 aa13.16□□□□□ -0.3
RABGAP1-210ENST00000480054 FAM212AQ96EL1 285 aa13.16□□□□□ -0.3
RABGAP1-210ENST00000480054 CHRM1P11229 460 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms