RNA–Protein interactions for RNA: ENST00000478717.5

PDE8A-204, Transcript of phosphodiesterase 8A, humanhuman

TSL 1 (best)

Gene PDE8A, Length 2,722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-204ENST00000478717 ATP1B4Q9UN42 357 aaPredicted RBP26.47■■□□□ 1.83
PDE8A-204ENST00000478717 TOPBP1Q92547 1522 aa26.47■■□□□ 1.83
PDE8A-204ENST00000478717 POLA1P09884 1462 aaPredicted RBP26.47■■□□□ 1.83
PDE8A-204ENST00000478717 DNMBPQ6XZF7 1577 aa26.44■■□□□ 1.82
PDE8A-204ENST00000478717 SUPT16HQ9Y5B9 1047 aaKnown RBP26.41■■□□□ 1.82
PDE8A-204ENST00000478717 ANP32EQ9BTT0 268 aa26.4■■□□□ 1.82
PDE8A-204ENST00000478717 ABCA10Q8WWZ4 1543 aa26.4■■□□□ 1.82
PDE8A-204ENST00000478717 CLSPNQ9HAW4 1339 aa26.37■■□□□ 1.81
PDE8A-204ENST00000478717 TIAM1Q13009 1591 aa26.35■■□□□ 1.81
PDE8A-204ENST00000478717 TSHZ2Q9NRE2 1034 aa26.35■■□□□ 1.81
PDE8A-204ENST00000478717 FHOD3Q2V2M9 1422 aa26.32■■□□□ 1.8
PDE8A-204ENST00000478717 LRRC9Q6ZRR7 1453 aa26.31■■□□□ 1.8
PDE8A-204ENST00000478717 TDRD9Q8NDG6 1382 aaKnown RBP26.31■■□□□ 1.8
PDE8A-204ENST00000478717 URB2Q14146 1524 aaKnown RBP26.3■■□□□ 1.8
PDE8A-204ENST00000478717 PHLDB1Q86UU1 1377 aa26.3■■□□□ 1.8
PDE8A-204ENST00000478717 FHAD1B1AJZ9 1412 aa26.29■■□□□ 1.8
PDE8A-204ENST00000478717 FAM50AQ14320 339 aaKnown RBP26.28■■□□□ 1.8
PDE8A-204ENST00000478717 MAP3K1Q13233 1512 aa26.27■■□□□ 1.8
PDE8A-204ENST00000478717 RAB3GAP2Q9H2M9 1393 aa26.24■■□□□ 1.79
PDE8A-204ENST00000478717 LAMC3Q9Y6N6 1575 aa26.23■■□□□ 1.79
PDE8A-204ENST00000478717 PCF11O94913 1555 aaKnown RBP26.23■■□□□ 1.79
PDE8A-204ENST00000478717 PDS5BQ9NTI5 1447 aa26.16■■□□□ 1.78
PDE8A-204ENST00000478717 CUL7Q14999 1698 aa26.15■■□□□ 1.78
PDE8A-204ENST00000478717 GAPVD1Q14C86 1478 aa26.12■■□□□ 1.77
PDE8A-204ENST00000478717 SETD5Q9C0A6 1442 aa26.11■■□□□ 1.77
PDE8A-204ENST00000478717 CASKIN1Q8WXD9 1431 aa26.11■■□□□ 1.77
PDE8A-204ENST00000478717 EFCAB5A4FU69 1503 aa26.1■■□□□ 1.77
PDE8A-204ENST00000478717 FYCO1Q9BQS8 1478 aa26.08■■□□□ 1.77
PDE8A-204ENST00000478717 CFAP43Q8NDM7 1665 aa26.08■■□□□ 1.77
PDE8A-204ENST00000478717 WDR97A6NE52 1622 aa26.07■■□□□ 1.76
PDE8A-204ENST00000478717 CTTNBP2Q8WZ74 1663 aa26.06■■□□□ 1.76
PDE8A-204ENST00000478717 BCANQ96GW7 911 aa26.05■■□□□ 1.76
PDE8A-204ENST00000478717 FMN1Q68DA7 1419 aa26.04■■□□□ 1.76
PDE8A-204ENST00000478717 ABCA5Q8WWZ7 1642 aa26.03■■□□□ 1.76
PDE8A-204ENST00000478717 MAPKBP1O60336 1514 aa26.03■■□□□ 1.76
PDE8A-204ENST00000478717 SIN3AQ96ST3 1273 aa26.02■■□□□ 1.76
PDE8A-204ENST00000478717 KIF21AQ7Z4S6 1674 aa26.02■■□□□ 1.76
PDE8A-204ENST00000478717 AQRO60306 1485 aaKnown RBP eCLIP26.01■■□□□ 1.757e-9■■■■■ 35.6
PDE8A-204ENST00000478717 MTUS2Q5JR59 1369 aa25.97■■□□□ 1.75
PDE8A-204ENST00000478717 SNAPC4Q5SXM2 1469 aa25.97■■□□□ 1.75
PDE8A-204ENST00000478717 FGD6Q6ZV73 1430 aa25.89■■□□□ 1.74
PDE8A-204ENST00000478717 TARBP1Q13395 1621 aaKnown RBP25.89■■□□□ 1.74
PDE8A-204ENST00000478717 SAMD9Q5K651 1589 aa25.88■■□□□ 1.73
PDE8A-204ENST00000478717 KCNH8Q96L42 1107 aa25.87■■□□□ 1.73
PDE8A-204ENST00000478717 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.85■■□□□ 1.73
PDE8A-204ENST00000478717 GRIN2BQ13224 1484 aa25.82■■□□□ 1.72
PDE8A-204ENST00000478717 LRRIQ1Q96JM4 1722 aa25.82■■□□□ 1.72
PDE8A-204ENST00000478717 PTPRKQ15262 1439 aa25.82■■□□□ 1.72
PDE8A-204ENST00000478717 ARID3CA6NKF2 412 aa25.81■■□□□ 1.72
PDE8A-204ENST00000478717 NCOA2Q15596 1464 aa25.8■■□□□ 1.72
PDE8A-204ENST00000478717 FKBP8Q14318 412 aa25.75■■□□□ 1.71
PDE8A-204ENST00000478717 HIRIP3Q9BW71 556 aaPredicted RBP25.74■■□□□ 1.71
PDE8A-204ENST00000478717 MYOM3Q5VTT5 1437 aa25.74■■□□□ 1.71
PDE8A-204ENST00000478717 MRC2Q9UBG0 1479 aa25.73■■□□□ 1.71
PDE8A-204ENST00000478717 RBM19Q9Y4C8 960 aaKnown RBP25.72■■□□□ 1.71
PDE8A-204ENST00000478717 PBRM1Q86U86 1689 aa25.7■■□□□ 1.71
PDE8A-204ENST00000478717 MAGI3Q5TCQ9 1506 aa25.7■■□□□ 1.7
PDE8A-204ENST00000478717 PPP1R15AO75807 674 aaPredicted RBP25.7■■□□□ 1.7
PDE8A-204ENST00000478717 CHIC2Q9UKJ5 165 aa25.7■■□□□ 1.7
PDE8A-204ENST00000478717 ZNF608Q9ULD9 1512 aaPredicted RBP25.69■■□□□ 1.7
PDE8A-204ENST00000478717 CCDC18Q5T9S5 1454 aa25.69■■□□□ 1.7
PDE8A-204ENST00000478717 DDX10Q13206 875 aaKnown RBP25.68■■□□□ 1.7
PDE8A-204ENST00000478717 HFM1A2PYH4 1435 aa25.67■■□□□ 1.7
PDE8A-204ENST00000478717 TIMELESSQ9UNS1 1208 aa25.67■■□□□ 1.7
PDE8A-204ENST00000478717 RRP7BPQ9NSQ0 103 aa25.66■■□□□ 1.7
PDE8A-204ENST00000478717 IQGAP2Q13576 1575 aa25.66■■□□□ 1.7
PDE8A-204ENST00000478717 SUPT6HQ7KZ85 1726 aaKnown RBP25.65■■□□□ 1.7
PDE8A-204ENST00000478717 EHBP1L1Q8N3D4 1523 aa25.65■■□□□ 1.7
PDE8A-204ENST00000478717 NAIPQ13075 1403 aa25.64■■□□□ 1.7
PDE8A-204ENST00000478717 ADAMTS12P58397 1594 aa25.64■■□□□ 1.69
PDE8A-204ENST00000478717 THOC2Q8NI27 1593 aaKnown RBP25.64■■□□□ 1.69
PDE8A-204ENST00000478717 UGGT2Q9NYU1 1516 aa25.61■■□□□ 1.69
PDE8A-204ENST00000478717 UACAQ9BZF9 1416 aa25.6■■□□□ 1.69
PDE8A-204ENST00000478717 PTPN23Q9H3S7 1636 aa25.6■■□□□ 1.69
PDE8A-204ENST00000478717 EPRSP07814 1512 aaKnown RBP25.6■■□□□ 1.69
PDE8A-204ENST00000478717 CDK13Q14004 1512 aaKnown RBP25.6■■□□□ 1.69
PDE8A-204ENST00000478717 TONSLQ96HA7 1378 aa25.58■■□□□ 1.69
PDE8A-204ENST00000478717 MSH5O43196 834 aa25.57■■□□□ 1.68
PDE8A-204ENST00000478717 ARHGEF11O15085 1522 aa25.56■■□□□ 1.68
PDE8A-204ENST00000478717 IFT140Q96RY7 1462 aa25.55■■□□□ 1.68
PDE8A-204ENST00000478717 HECW1Q76N89 1606 aa25.54■■□□□ 1.68
PDE8A-204ENST00000478717 TRIM52Q96A61 297 aa25.52■■□□□ 1.68
PDE8A-204ENST00000478717 PRKCSHP14314 528 aaPredicted RBP25.48■■□□□ 1.67
PDE8A-204ENST00000478717 WDR62O43379 1518 aa25.47■■□□□ 1.67
PDE8A-204ENST00000478717 FBLN2P98095 1184 aa25.46■■□□□ 1.67
PDE8A-204ENST00000478717 KIAA0586Q9BVV6 1533 aa25.45■■□□□ 1.67
PDE8A-204ENST00000478717 TCOF1Q13428 1488 aaKnown RBP25.45■■□□□ 1.66
PDE8A-204ENST00000478717 DISP1Q96F81 1524 aa25.44■■□□□ 1.66
PDE8A-204ENST00000478717 CHMP7Q8WUX9 453 aaPredicted RBP25.42■■□□□ 1.66
PDE8A-204ENST00000478717 ZNF644Q9H582 1327 aaPredicted RBP25.42■■□□□ 1.66
PDE8A-204ENST00000478717 ERCC6Q03468 1493 aa25.42■■□□□ 1.66
PDE8A-204ENST00000478717 GRIN2AQ12879 1464 aa25.4■■□□□ 1.66
PDE8A-204ENST00000478717 FOXD1Q16676 465 aa25.4■■□□□ 1.66
PDE8A-204ENST00000478717 MIA2Q96PC5 1412 aa25.39■■□□□ 1.66
PDE8A-204ENST00000478717 KDM6BO15054 1643 aa25.39■■□□□ 1.65
PDE8A-204ENST00000478717 NEFLP07196 543 aa25.38■■□□□ 1.65
PDE8A-204ENST00000478717 EIF4G3O43432 1585 aaKnown RBP25.38■■□□□ 1.65
PDE8A-204ENST00000478717 KIAA0556O60303 1618 aa25.37■■□□□ 1.65
PDE8A-204ENST00000478717 MPHOSPH9Q99550 1183 aa25.37■■□□□ 1.65
PDE8A-204ENST00000478717 DENND4BO75064 1496 aaPredicted RBP25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 1431.4 ms