RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 TOP2BQ02880 1626 aa14.52□□□□□ -0.08
ERCC8-205ENST00000477893 GRIN2BQ13224 1484 aa14.52□□□□□ -0.08
ERCC8-205ENST00000477893 BIVM-ERCC5R4GMW8 1640 aa14.52□□□□□ -0.09
ERCC8-205ENST00000477893 PBRM1Q86U86 1689 aa14.51□□□□□ -0.09
ERCC8-205ENST00000477893 ABCA10Q8WWZ4 1543 aa14.51□□□□□ -0.09
ERCC8-205ENST00000477893 GAPVD1Q14C86 1478 aa14.5□□□□□ -0.09
ERCC8-205ENST00000477893 RIMBP3CA6NJZ7 1639 aa14.48□□□□□ -0.09
ERCC8-205ENST00000477893 RIMBP3BA6NNM3 1639 aa14.48□□□□□ -0.09
ERCC8-205ENST00000477893 ABCA5Q8WWZ7 1642 aa14.48□□□□□ -0.09
ERCC8-205ENST00000477893 RIMBP3Q9UFD9 1639 aa14.48□□□□□ -0.09
ERCC8-205ENST00000477893 CHMP7Q8WUX9 453 aaPredicted RBP14.48□□□□□ -0.09
ERCC8-205ENST00000477893 MAGI1Q96QZ7 1491 aaPredicted RBP14.48□□□□□ -0.09
ERCC8-205ENST00000477893 ARHGEF11O15085 1522 aa14.46□□□□□ -0.09
ERCC8-205ENST00000477893 SYNJ2O15056 1496 aa14.44□□□□□ -0.1
ERCC8-205ENST00000477893 TRHP20396 242 aaPredicted RBP14.44□□□□□ -0.1
ERCC8-205ENST00000477893 ABCB7O75027 752 aa14.42□□□□□ -0.1
ERCC8-205ENST00000477893 ADAMTS12P58397 1594 aa14.39□□□□□ -0.11
ERCC8-205ENST00000477893 CLASP1Q7Z460 1538 aa14.38□□□□□ -0.11
ERCC8-205ENST00000477893 CYB5RLQ6IPT4 315 aa14.36□□□□□ -0.11
ERCC8-205ENST00000477893 GRIN2AQ12879 1464 aa14.35□□□□□ -0.11
ERCC8-205ENST00000477893 ARAP1Q96P48 1450 aa14.34□□□□□ -0.11
ERCC8-205ENST00000477893 ERICH3Q5RHP9 1530 aa14.32□□□□□ -0.12
ERCC8-205ENST00000477893 SLC4A2P04920 1241 aa14.32□□□□□ -0.12
ERCC8-205ENST00000477893 FHAD1B1AJZ9 1412 aa14.32□□□□□ -0.12
ERCC8-205ENST00000477893 CEP170Q5SW79 1584 aa14.3□□□□□ -0.12
ERCC8-205ENST00000477893 ZNF219Q9P2Y4 722 aaPredicted RBP14.29□□□□□ -0.12
ERCC8-205ENST00000477893 KIF27Q86VH2 1401 aa14.26□□□□□ -0.13
ERCC8-205ENST00000477893 NUP160Q12769 1436 aa14.25□□□□□ -0.13
ERCC8-205ENST00000477893 APLP2Q06481 763 aa14.25□□□□□ -0.13
ERCC8-205ENST00000477893 ERCC6L2Q5T890 1561 aa14.23□□□□□ -0.13
ERCC8-205ENST00000477893 IGF1RP08069 1367 aa14.21□□□□□ -0.14
ERCC8-205ENST00000477893 CUL7Q14999 1698 aa14.18□□□□□ -0.14
ERCC8-205ENST00000477893 RUSC2Q8N2Y8 1516 aa14.17□□□□□ -0.14
ERCC8-205ENST00000477893 SHROOM2Q13796 1616 aa14.16□□□□□ -0.14
ERCC8-205ENST00000477893 PRG4Q92954 1404 aaPredicted RBP14.15□□□□□ -0.14
ERCC8-205ENST00000477893 CARMIL1Q5VZK9 1371 aa14.13□□□□□ -0.15
ERCC8-205ENST00000477893 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.12□□□□□ -0.15
ERCC8-205ENST00000477893 HNRNPUL2Q1KMD3 747 aaKnown RBP14.12□□□□□ -0.15
ERCC8-205ENST00000477893 JPH4Q96JJ6 628 aa14.11□□□□□ -0.15
ERCC8-205ENST00000477893 KCNA4P22459 653 aa14.1□□□□□ -0.15
ERCC8-205ENST00000477893 RBM42Q9BTD8 480 aaKnown RBP14.08□□□□□ -0.16
ERCC8-205ENST00000477893 TTBK1Q5TCY1 1321 aaPredicted RBP14.08□□□□□ -0.16
ERCC8-205ENST00000477893 KIAA0586Q9BVV6 1533 aa14.07□□□□□ -0.16
ERCC8-205ENST00000477893 SAMD1Q6SPF0 538 aaPredicted RBP14.03□□□□□ -0.16
ERCC8-205ENST00000477893 CHRDL2Q6WN34 429 aa14.03□□□□□ -0.16
ERCC8-205ENST00000477893 RAPGEF2Q9Y4G8 1499 aa14.03□□□□□ -0.16
ERCC8-205ENST00000477893 IQGAP2Q13576 1575 aa14.01□□□□□ -0.17
ERCC8-205ENST00000477893 ADCY10Q96PN6 1610 aa13.95□□□□□ -0.18
ERCC8-205ENST00000477893 CARMIL2Q6F5E8 1435 aa13.95□□□□□ -0.18
ERCC8-205ENST00000477893 PTPRGP23470 1445 aa13.94□□□□□ -0.18
ERCC8-205ENST00000477893 FAM9AQ8IZU1 332 aaPredicted RBP13.94□□□□□ -0.18
ERCC8-205ENST00000477893 DISP1Q96F81 1524 aa13.92□□□□□ -0.18
ERCC8-205ENST00000477893 NPM1P06748 294 aaKnown RBP eCLIP13.92□□□□□ -0.18
ERCC8-205ENST00000477893 TNIKQ9UKE5 1360 aa13.92□□□□□ -0.18
ERCC8-205ENST00000477893 PRXQ9BXM0 1461 aa13.92□□□□□ -0.18
ERCC8-205ENST00000477893 CTTNBP2Q8WZ74 1663 aa13.91□□□□□ -0.18
ERCC8-205ENST00000477893 POLA2Q14181 598 aa13.9□□□□□ -0.18
ERCC8-205ENST00000477893 UGGT2Q9NYU1 1516 aa13.9□□□□□ -0.19
ERCC8-205ENST00000477893 KIAA0556O60303 1618 aa13.89□□□□□ -0.19
ERCC8-205ENST00000477893 CSRNP3Q8WYN3 585 aa13.88□□□□□ -0.19
ERCC8-205ENST00000477893 EHMT2Q96KQ7 1210 aa13.86□□□□□ -0.19
ERCC8-205ENST00000477893 RANGAP1P46060 587 aaPredicted RBP13.85□□□□□ -0.19
ERCC8-205ENST00000477893 FAM69CQ0P6D2 419 aa13.85□□□□□ -0.19
ERCC8-205ENST00000477893 KIF13AQ9H1H9 1805 aa13.85□□□□□ -0.19
ERCC8-205ENST00000477893 MAPKBP1O60336 1514 aa13.85□□□□□ -0.19
ERCC8-205ENST00000477893 UACAQ9BZF9 1416 aa13.83□□□□□ -0.2
ERCC8-205ENST00000477893 EEA1Q15075 1411 aa13.82□□□□□ -0.2
ERCC8-205ENST00000477893 ABCC2Q92887 1545 aa13.82□□□□□ -0.2
ERCC8-205ENST00000477893 P3H3Q8IVL6 736 aa13.82□□□□□ -0.2
ERCC8-205ENST00000477893 DIP2BQ9P265 1576 aa13.82□□□□□ -0.2
ERCC8-205ENST00000477893 GOLGA3Q08378 1498 aa13.81□□□□□ -0.2
ERCC8-205ENST00000477893 ABCC10Q5T3U5 1492 aa13.81□□□□□ -0.2
ERCC8-205ENST00000477893 SP7Q8TDD2 431 aaPredicted RBP13.79□□□□□ -0.2
ERCC8-205ENST00000477893 UHRF1BP1LA0JNW5 1464 aa13.79□□□□□ -0.2
ERCC8-205ENST00000477893 PLB1Q6P1J6 1458 aa13.79□□□□□ -0.2
ERCC8-205ENST00000477893 ASXL2Q76L83 1435 aa13.78□□□□□ -0.2
ERCC8-205ENST00000477893 ARID3CA6NKF2 412 aa13.77□□□□□ -0.21
ERCC8-205ENST00000477893 ZCCHC11Q5TAX3 1644 aaKnown RBP13.76□□□□□ -0.21
ERCC8-205ENST00000477893 TSPOAP1O95153 1857 aa13.75□□□□□ -0.21
ERCC8-205ENST00000477893 KIF21BO75037 1637 aa13.74□□□□□ -0.21
ERCC8-205ENST00000477893 KDM5BQ9UGL1 1544 aa13.74□□□□□ -0.21
ERCC8-205ENST00000477893 ABCA8O94911 1581 aa13.72□□□□□ -0.21
ERCC8-205ENST00000477893 SAMD9Q5K651 1589 aa13.72□□□□□ -0.21
ERCC8-205ENST00000477893 FHOD3Q2V2M9 1422 aa13.71□□□□□ -0.22
ERCC8-205ENST00000477893 MYCNP04198 464 aaPredicted RBP13.7□□□□□ -0.22
ERCC8-205ENST00000477893 UBTFP17480 764 aaKnown RBP13.69□□□□□ -0.22
ERCC8-205ENST00000477893 EPRSP07814 1512 aaKnown RBP13.69□□□□□ -0.22
ERCC8-205ENST00000477893 WDR7Q9Y4E6 1490 aa13.67□□□□□ -0.22
ERCC8-205ENST00000477893 KDM6BO15054 1643 aa13.66□□□□□ -0.22
ERCC8-205ENST00000477893 KCNH8Q96L42 1107 aa13.66□□□□□ -0.22
ERCC8-205ENST00000477893 GLI2P10070 1586 aa13.66□□□□□ -0.22
ERCC8-205ENST00000477893 AKT1S1Q96B36 256 aa13.65□□□□□ -0.22
ERCC8-205ENST00000477893 RAPGEF6Q8TEU7 1601 aa13.64□□□□□ -0.23
ERCC8-205ENST00000477893 PPRC1Q5VV67 1664 aaKnown RBP13.63□□□□□ -0.23
ERCC8-205ENST00000477893 EFCAB5A4FU69 1503 aa13.62□□□□□ -0.23
ERCC8-205ENST00000477893 ATP10BO94823 1461 aa13.61□□□□□ -0.23
ERCC8-205ENST00000477893 MAP3K4Q9Y6R4 1608 aa13.61□□□□□ -0.23
ERCC8-205ENST00000477893 PIP4P2Q8N4L2 257 aa13.59□□□□□ -0.23
ERCC8-205ENST00000477893 NUP153P49790 1475 aaKnown RBP13.59□□□□□ -0.23
ERCC8-205ENST00000477893 TEX14Q8IWB6 1497 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms