RNA–Protein interactions for RNA: ENST00000477891.1

MINDY3-206, Transcript of MINDY lysine 48 deubiquitinase 3, humanhuman

TSL 1 (best)

Gene MINDY3, Length 2,307 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY3-206ENST00000477891 MAP3K1Q13233 1512 aa15.59■□□□□ 0.09
MINDY3-206ENST00000477891 FHOD3Q2V2M9 1422 aa15.58■□□□□ 0.09
MINDY3-206ENST00000477891 FHAD1B1AJZ9 1412 aa15.58■□□□□ 0.08
MINDY3-206ENST00000477891 LRRC9Q6ZRR7 1453 aa15.58■□□□□ 0.08
MINDY3-206ENST00000477891 SCAF1Q9H7N4 1312 aaKnown RBP15.57■□□□□ 0.08
MINDY3-206ENST00000477891 CLSPNQ9HAW4 1339 aa15.56■□□□□ 0.08
MINDY3-206ENST00000477891 PHLDB1Q86UU1 1377 aa15.56■□□□□ 0.08
MINDY3-206ENST00000477891 CUL7Q14999 1698 aa15.55■□□□□ 0.08
MINDY3-206ENST00000477891 PCF11O94913 1555 aaKnown RBP15.53■□□□□ 0.08
MINDY3-206ENST00000477891 GAPVD1Q14C86 1478 aa15.53■□□□□ 0.08
MINDY3-206ENST00000477891 WDR97A6NE52 1622 aa15.53■□□□□ 0.08
MINDY3-206ENST00000477891 NEUROD1Q13562 356 aa15.51■□□□□ 0.07
MINDY3-206ENST00000477891 KIF21AQ7Z4S6 1674 aa15.51■□□□□ 0.07
MINDY3-206ENST00000477891 ABCA5Q8WWZ7 1642 aa15.5■□□□□ 0.07
MINDY3-206ENST00000477891 FAM50AQ14320 339 aaKnown RBP15.49■□□□□ 0.07
MINDY3-206ENST00000477891 EFCAB5A4FU69 1503 aa15.49■□□□□ 0.07
MINDY3-206ENST00000477891 RAB3GAP2Q9H2M9 1393 aa15.48■□□□□ 0.07
MINDY3-206ENST00000477891 CASKIN1Q8WXD9 1431 aa15.48■□□□□ 0.07
MINDY3-206ENST00000477891 ACIN1Q9UKV3 1341 aaKnown RBP15.48■□□□□ 0.07
MINDY3-206ENST00000477891 CTTNBP2Q8WZ74 1663 aa15.47■□□□□ 0.07
MINDY3-206ENST00000477891 MIER1Q8N108 512 aa15.46■□□□□ 0.07
MINDY3-206ENST00000477891 FYCO1Q9BQS8 1478 aa15.46■□□□□ 0.07
MINDY3-206ENST00000477891 CFAP43Q8NDM7 1665 aa15.45■□□□□ 0.06
MINDY3-206ENST00000477891 AQRO60306 1485 aaKnown RBP eCLIP15.45■□□□□ 0.06
MINDY3-206ENST00000477891 TARBP1Q13395 1621 aaKnown RBP15.43■□□□□ 0.06
MINDY3-206ENST00000477891 FMN1Q68DA7 1419 aa15.43■□□□□ 0.06
MINDY3-206ENST00000477891 SETD5Q9C0A6 1442 aa15.42■□□□□ 0.06
MINDY3-206ENST00000477891 SNAPC4Q5SXM2 1469 aa15.42■□□□□ 0.06
MINDY3-206ENST00000477891 SAMD9Q5K651 1589 aa15.38■□□□□ 0.05
MINDY3-206ENST00000477891 CENPBP07199 599 aaPredicted RBP15.38■□□□□ 0.05
MINDY3-206ENST00000477891 MAPKBP1O60336 1514 aa15.37■□□□□ 0.05
MINDY3-206ENST00000477891 MTUS2Q5JR59 1369 aa15.36■□□□□ 0.05
MINDY3-206ENST00000477891 YTHDC1Q96MU7 727 aaKnown RBP15.35■□□□□ 0.05
MINDY3-206ENST00000477891 MRC2Q9UBG0 1479 aa15.34■□□□□ 0.05
MINDY3-206ENST00000477891 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.33■□□□□ 0.04
MINDY3-206ENST00000477891 GRIN2BQ13224 1484 aa15.33■□□□□ 0.04
MINDY3-206ENST00000477891 SIN3AQ96ST3 1273 aa15.33■□□□□ 0.04
MINDY3-206ENST00000477891 FGD6Q6ZV73 1430 aa15.32■□□□□ 0.04
MINDY3-206ENST00000477891 LRRIQ1Q96JM4 1722 aa15.32■□□□□ 0.04
MINDY3-206ENST00000477891 GTF3C3Q9Y5Q9 886 aa15.3■□□□□ 0.04
MINDY3-206ENST00000477891 ZNF608Q9ULD9 1512 aaPredicted RBP15.3■□□□□ 0.04
MINDY3-206ENST00000477891 PBRM1Q86U86 1689 aa15.29■□□□□ 0.04
MINDY3-206ENST00000477891 PTPRKQ15262 1439 aa15.28■□□□□ 0.04
MINDY3-206ENST00000477891 NCOA2Q15596 1464 aa15.27■□□□□ 0.04
MINDY3-206ENST00000477891 ADAMTS12P58397 1594 aa15.26■□□□□ 0.03
MINDY3-206ENST00000477891 MAGI3Q5TCQ9 1506 aa15.24■□□□□ 0.03
MINDY3-206ENST00000477891 IQGAP2Q13576 1575 aa15.24■□□□□ 0.03
MINDY3-206ENST00000477891 MYOM3Q5VTT5 1437 aa15.24■□□□□ 0.03
MINDY3-206ENST00000477891 ARID3CA6NKF2 412 aa15.24■□□□□ 0.03
MINDY3-206ENST00000477891 IFT140Q96RY7 1462 aa15.24■□□□□ 0.03
MINDY3-206ENST00000477891 THOC2Q8NI27 1593 aaKnown RBP15.22■□□□□ 0.03
MINDY3-206ENST00000477891 WDR62O43379 1518 aa15.21■□□□□ 0.03
MINDY3-206ENST00000477891 HFM1A2PYH4 1435 aa15.2■□□□□ 0.02
MINDY3-206ENST00000477891 EHBP1L1Q8N3D4 1523 aa15.19■□□□□ 0.02
MINDY3-206ENST00000477891 SUPT6HQ7KZ85 1726 aaKnown RBP15.19■□□□□ 0.02
MINDY3-206ENST00000477891 ARHGEF11O15085 1522 aa15.19■□□□□ 0.02
MINDY3-206ENST00000477891 EPRSP07814 1512 aaKnown RBP15.19■□□□□ 0.02
MINDY3-206ENST00000477891 UGGT2Q9NYU1 1516 aa15.19■□□□□ 0.02
MINDY3-206ENST00000477891 CCDC18Q5T9S5 1454 aa15.18■□□□□ 0.02
MINDY3-206ENST00000477891 NAIPQ13075 1403 aa15.17■□□□□ 0.02
MINDY3-206ENST00000477891 CDK13Q14004 1512 aaKnown RBP15.17■□□□□ 0.02
MINDY3-206ENST00000477891 CHIC2Q9UKJ5 165 aa15.16■□□□□ 0.02
MINDY3-206ENST00000477891 TIMELESSQ9UNS1 1208 aa15.16■□□□□ 0.02
MINDY3-206ENST00000477891 PPP1R15AO75807 674 aaPredicted RBP15.16■□□□□ 0.02
MINDY3-206ENST00000477891 HECW1Q76N89 1606 aa15.15■□□□□ 0.02
MINDY3-206ENST00000477891 KIAA0586Q9BVV6 1533 aa15.15■□□□□ 0.02
MINDY3-206ENST00000477891 RRP7BPQ9NSQ0 103 aa15.15■□□□□ 0.02
MINDY3-206ENST00000477891 PTPN23Q9H3S7 1636 aa15.15■□□□□ 0.02
MINDY3-206ENST00000477891 ERCC6Q03468 1493 aa15.14■□□□□ 0.01
MINDY3-206ENST00000477891 DISP1Q96F81 1524 aa15.13■□□□□ 0.01
MINDY3-206ENST00000477891 UACAQ9BZF9 1416 aa15.13■□□□□ 0.01
MINDY3-206ENST00000477891 GRIN2AQ12879 1464 aa15.12■□□□□ 0.01
MINDY3-206ENST00000477891 EIF4G3O43432 1585 aaKnown RBP15.12■□□□□ 0.01
MINDY3-206ENST00000477891 HIRIP3Q9BW71 556 aaPredicted RBP15.11■□□□□ 0.01
MINDY3-206ENST00000477891 CHMP7Q8WUX9 453 aaPredicted RBP15.1■□□□□ 0.01
MINDY3-206ENST00000477891 TCOF1Q13428 1488 aaKnown RBP15.1■□□□□ 0.01
MINDY3-206ENST00000477891 FBLN2P98095 1184 aa15.09■□□□□ 0.01
MINDY3-206ENST00000477891 KIAA0556O60303 1618 aa15.08■□□□□ 0
MINDY3-206ENST00000477891 DDX10Q13206 875 aaKnown RBP15.08■□□□□ 0
MINDY3-206ENST00000477891 NUP153P49790 1475 aaKnown RBP15.06■□□□□ 0
MINDY3-206ENST00000477891 MIA2Q96PC5 1412 aa15.06■□□□□ 0
MINDY3-206ENST00000477891 TONSLQ96HA7 1378 aa15.06■□□□□ 0
MINDY3-206ENST00000477891 KCNH8Q96L42 1107 aa15.06■□□□□ 0
MINDY3-206ENST00000477891 ZNF644Q9H582 1327 aaPredicted RBP15.05■□□□□ -0
MINDY3-206ENST00000477891 TRIM52Q96A61 297 aa15.04■□□□□ -0
MINDY3-206ENST00000477891 MAGI1Q96QZ7 1491 aaPredicted RBP15.04■□□□□ -0
MINDY3-206ENST00000477891 CEP170Q5SW79 1584 aa15.02■□□□□ -0
MINDY3-206ENST00000477891 SYNJ2O15056 1496 aa15.02■□□□□ -0
MINDY3-206ENST00000477891 DENND4BO75064 1496 aaPredicted RBP15.02■□□□□ -0
MINDY3-206ENST00000477891 KDM6BO15054 1643 aa15.02■□□□□ -0
MINDY3-206ENST00000477891 JPH4Q96JJ6 628 aa15.02■□□□□ -0
MINDY3-206ENST00000477891 RAPGEF6Q8TEU7 1601 aa15□□□□□ -0.01
MINDY3-206ENST00000477891 PLB1Q6P1J6 1458 aa15□□□□□ -0.01
MINDY3-206ENST00000477891 CDK11AQ9UQ88 783 aaPredicted RBP15□□□□□ -0.01
MINDY3-206ENST00000477891 MPHOSPH9Q99550 1183 aa14.99□□□□□ -0.01
MINDY3-206ENST00000477891 PRG4Q92954 1404 aaPredicted RBP14.99□□□□□ -0.01
MINDY3-206ENST00000477891 AKNAQ7Z591 1439 aa14.98□□□□□ -0.01
MINDY3-206ENST00000477891 FOXD1Q16676 465 aa14.98□□□□□ -0.01
MINDY3-206ENST00000477891 ABCC5O15440 1437 aa14.98□□□□□ -0.01
MINDY3-206ENST00000477891 DAPK1P53355 1430 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms