RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 MAPKBP1O60336 1514 aa13.66□□□□□ -0.22
SPTLC1-205ENST00000477888 ADAMTS12P58397 1594 aa13.63□□□□□ -0.23
SPTLC1-205ENST00000477888 KDM6BO15054 1643 aa13.63□□□□□ -0.23
SPTLC1-205ENST00000477888 DIP2BQ9P265 1576 aa13.62□□□□□ -0.23
SPTLC1-205ENST00000477888 WRNQ14191 1432 aaPredicted RBP eCLIP13.6□□□□□ -0.23
SPTLC1-205ENST00000477888 ADGRL1O94910 1474 aa13.56□□□□□ -0.24
SPTLC1-205ENST00000477888 ERICH3Q5RHP9 1530 aa13.54□□□□□ -0.24
SPTLC1-205ENST00000477888 ADCY10Q96PN6 1610 aa13.53□□□□□ -0.24
SPTLC1-205ENST00000477888 FBXO41Q8TF61 875 aa13.53□□□□□ -0.24
SPTLC1-205ENST00000477888 HECW2Q9P2P5 1572 aa13.52□□□□□ -0.25
SPTLC1-205ENST00000477888 COL17A1Q9UMD9 1497 aaPredicted RBP13.48□□□□□ -0.25
SPTLC1-205ENST00000477888 TSPOAP1O95153 1857 aa13.45□□□□□ -0.26
SPTLC1-205ENST00000477888 RUSC2Q8N2Y8 1516 aa13.44□□□□□ -0.26
SPTLC1-205ENST00000477888 PTPRGP23470 1445 aa13.43□□□□□ -0.26
SPTLC1-205ENST00000477888 KIAA0586Q9BVV6 1533 aa13.43□□□□□ -0.26
SPTLC1-205ENST00000477888 ASXL2Q76L83 1435 aa13.41□□□□□ -0.26
SPTLC1-205ENST00000477888 TOP2BQ02880 1626 aa13.41□□□□□ -0.26
SPTLC1-205ENST00000477888 PLB1Q6P1J6 1458 aa13.41□□□□□ -0.26
SPTLC1-205ENST00000477888 GLI2P10070 1586 aa13.41□□□□□ -0.26
SPTLC1-205ENST00000477888 ABCC2Q92887 1545 aa13.39□□□□□ -0.27
SPTLC1-205ENST00000477888 PPRC1Q5VV67 1664 aaKnown RBP13.37□□□□□ -0.27
SPTLC1-205ENST00000477888 BIVM-ERCC5R4GMW8 1640 aa13.37□□□□□ -0.27
SPTLC1-205ENST00000477888 TTBK1Q5TCY1 1321 aaPredicted RBP13.36□□□□□ -0.27
SPTLC1-205ENST00000477888 IGF1RP08069 1367 aa13.34□□□□□ -0.27
SPTLC1-205ENST00000477888 TNIKQ9UKE5 1360 aa13.34□□□□□ -0.27
SPTLC1-205ENST00000477888 EPRSP07814 1512 aaKnown RBP13.33□□□□□ -0.28
SPTLC1-205ENST00000477888 UHRF1BP1LA0JNW5 1464 aa13.32□□□□□ -0.28
SPTLC1-205ENST00000477888 TEX14Q8IWB6 1497 aa13.31□□□□□ -0.28
SPTLC1-205ENST00000477888 UACAQ9BZF9 1416 aa13.3□□□□□ -0.28
SPTLC1-205ENST00000477888 CARMIL2Q6F5E8 1435 aa13.29□□□□□ -0.28
SPTLC1-205ENST00000477888 LMTK3Q96Q04 1460 aa13.28□□□□□ -0.28
SPTLC1-205ENST00000477888 KDM5BQ9UGL1 1544 aa13.26□□□□□ -0.29
SPTLC1-205ENST00000477888 MAP3K4Q9Y6R4 1608 aa13.26□□□□□ -0.29
SPTLC1-205ENST00000477888 SOCS7O14512 581 aa13.21□□□□□ -0.29
SPTLC1-205ENST00000477888 ILDR2Q71H61 639 aa13.21□□□□□ -0.29
SPTLC1-205ENST00000477888 KIF27Q86VH2 1401 aa13.21□□□□□ -0.3
SPTLC1-205ENST00000477888 CARMIL1Q5VZK9 1371 aa13.2□□□□□ -0.3
SPTLC1-205ENST00000477888 SUPT5HO00267 1087 aaKnown RBP13.2□□□□□ -0.3
SPTLC1-205ENST00000477888 CUL7Q14999 1698 aa13.19□□□□□ -0.3
SPTLC1-205ENST00000477888 CD109Q6YHK3 1445 aa13.19□□□□□ -0.3
SPTLC1-205ENST00000477888 MAGI3Q5TCQ9 1506 aa13.18□□□□□ -0.3
SPTLC1-205ENST00000477888 DISP1Q96F81 1524 aa13.18□□□□□ -0.3
SPTLC1-205ENST00000477888 PTPRMP28827 1452 aa13.18□□□□□ -0.3
SPTLC1-205ENST00000477888 WDR7Q9Y4E6 1490 aa13.16□□□□□ -0.3
SPTLC1-205ENST00000477888 KCNH8Q96L42 1107 aa13.15□□□□□ -0.3
SPTLC1-205ENST00000477888 IQGAP2Q13576 1575 aa13.13□□□□□ -0.31
SPTLC1-205ENST00000477888 CERKQ8TCT0 537 aa13.13□□□□□ -0.31
SPTLC1-205ENST00000477888 ZCCHC11Q5TAX3 1644 aaKnown RBP13.12□□□□□ -0.31
SPTLC1-205ENST00000477888 DISP3Q9P2K9 1392 aa13.11□□□□□ -0.31
SPTLC1-205ENST00000477888 ARAP3Q8WWN8 1544 aa13.1□□□□□ -0.31
SPTLC1-205ENST00000477888 PCF11O94913 1555 aaKnown RBP13.1□□□□□ -0.31
SPTLC1-205ENST00000477888 KIF21BO75037 1637 aa13.1□□□□□ -0.31
SPTLC1-205ENST00000477888 ADAMTSL3P82987 1691 aa13.08□□□□□ -0.31
SPTLC1-205ENST00000477888 HSPA2P54652 639 aa13.08□□□□□ -0.32
SPTLC1-205ENST00000477888 UGGT2Q9NYU1 1516 aa13.08□□□□□ -0.32
SPTLC1-205ENST00000477888 RAPGEF3O95398 923 aa13.06□□□□□ -0.32
SPTLC1-205ENST00000477888 PHLDB1Q86UU1 1377 aa13.05□□□□□ -0.32
SPTLC1-205ENST00000477888 CFAP43Q8NDM7 1665 aa13.03□□□□□ -0.32
SPTLC1-205ENST00000477888 ARID4BQ4LE39 1312 aaPredicted RBP13.03□□□□□ -0.32
SPTLC1-205ENST00000477888 KIAA0556O60303 1618 aa13.02□□□□□ -0.33
SPTLC1-205ENST00000477888 PHF23Q9BUL5 403 aaPredicted RBP13.01□□□□□ -0.33
SPTLC1-205ENST00000477888 RAPGEF2Q9Y4G8 1499 aa12.98□□□□□ -0.33
SPTLC1-205ENST00000477888 MADDQ8WXG6 1647 aa12.97□□□□□ -0.33
SPTLC1-205ENST00000477888 ABCA8O94911 1581 aa12.97□□□□□ -0.33
SPTLC1-205ENST00000477888 BCORL1Q5H9F3 1711 aa12.96□□□□□ -0.33
SPTLC1-205ENST00000477888 NEO1Q92859 1461 aa12.93□□□□□ -0.34
SPTLC1-205ENST00000477888 ARID3CA6NKF2 412 aa12.93□□□□□ -0.34
SPTLC1-205ENST00000477888 PLPPR3Q6T4P5 718 aa12.93□□□□□ -0.34
SPTLC1-205ENST00000477888 ATP10BO94823 1461 aa12.92□□□□□ -0.34
SPTLC1-205ENST00000477888 GOLGA3Q08378 1498 aa12.91□□□□□ -0.34
SPTLC1-205ENST00000477888 DMRT2Q9Y5R5 561 aa12.89□□□□□ -0.35
SPTLC1-205ENST00000477888 ABCA9Q8IUA7 1624 aa12.88□□□□□ -0.35
SPTLC1-205ENST00000477888 FRMPD1Q5SYB0 1578 aa12.88□□□□□ -0.35
SPTLC1-205ENST00000477888 POGZQ7Z3K3 1410 aa12.88□□□□□ -0.35
SPTLC1-205ENST00000477888 YEATS2Q9ULM3 1422 aa12.88□□□□□ -0.35
SPTLC1-205ENST00000477888 RIMS1Q86UR5 1692 aaKnown RBP12.86□□□□□ -0.35
SPTLC1-205ENST00000477888 SPATA31D1Q6ZQQ2 1576 aa12.86□□□□□ -0.35
SPTLC1-205ENST00000477888 FHOD3Q2V2M9 1422 aa12.85□□□□□ -0.35
SPTLC1-205ENST00000477888 DENND4BO75064 1496 aaPredicted RBP12.85□□□□□ -0.35
SPTLC1-205ENST00000477888 MLECQ14165 292 aa12.84□□□□□ -0.35
SPTLC1-205ENST00000477888 FAM9AQ8IZU1 332 aaPredicted RBP12.84□□□□□ -0.35
SPTLC1-205ENST00000477888 ARHGEF40Q8TER5 1519 aa12.83□□□□□ -0.35
SPTLC1-205ENST00000477888 AKNAQ7Z591 1439 aa12.83□□□□□ -0.36
SPTLC1-205ENST00000477888 P3H3Q8IVL6 736 aa12.82□□□□□ -0.36
SPTLC1-205ENST00000477888 FANCAO15360 1455 aa12.82□□□□□ -0.36
SPTLC1-205ENST00000477888 CEBPAP49715 358 aaPredicted RBP12.81□□□□□ -0.36
SPTLC1-205ENST00000477888 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.8□□□□□ -0.36
SPTLC1-205ENST00000477888 HNRNPUL2Q1KMD3 747 aaKnown RBP12.8□□□□□ -0.36
SPTLC1-205ENST00000477888 MAGI2Q86UL8 1455 aa12.78□□□□□ -0.36
SPTLC1-205ENST00000477888 PTPRTO14522 1441 aa12.77□□□□□ -0.37
SPTLC1-205ENST00000477888 TTC37Q6PGP7 1564 aa12.77□□□□□ -0.37
SPTLC1-205ENST00000477888 PLEKHD1A6NEE1 506 aa12.75□□□□□ -0.37
SPTLC1-205ENST00000477888 ZMYM4Q5VZL5 1548 aa12.75□□□□□ -0.37
SPTLC1-205ENST00000477888 ZFYVE16Q7Z3T8 1539 aa12.75□□□□□ -0.37
SPTLC1-205ENST00000477888 SIGLEC1Q9BZZ2 1709 aa12.75□□□□□ -0.37
SPTLC1-205ENST00000477888 STRCQ7RTU9 1775 aa12.74□□□□□ -0.37
SPTLC1-205ENST00000477888 ARHGEF12Q9NZN5 1544 aa12.74□□□□□ -0.37
SPTLC1-205ENST00000477888 RICTORQ6R327 1708 aa12.74□□□□□ -0.37
SPTLC1-205ENST00000477888 LTBP4Q8N2S1 1624 aa12.73□□□□□ -0.37
SPTLC1-205ENST00000477888 PRXQ9BXM0 1461 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms